RNA–Protein interactions for RNA: ENST00000585409.2

LSM7-203, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM7, Length 512 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-203ENST00000585409 C1orf115Q9H7X2 142 aa28.61■■■□□ 2.17
LSM7-203ENST00000585409 EN2P19622 333 aaPredicted RBP28.6■■■□□ 2.17
LSM7-203ENST00000585409 TAF1CQ15572 869 aaPredicted RBP28.6■■■□□ 2.17
LSM7-203ENST00000585409 METTL24Q5JXM2 366 aa28.6■■■□□ 2.17
LSM7-203ENST00000585409 RPAP2Q8IXW5 612 aaPredicted RBP28.6■■■□□ 2.17
LSM7-203ENST00000585409 ZNF333Q96JL9 665 aa28.6■■■□□ 2.17
LSM7-203ENST00000585409 SUPT16HQ9Y5B9 1047 aaKnown RBP28.6■■■□□ 2.17
LSM7-203ENST00000585409 CSADQ9Y600 493 aa28.6■■■□□ 2.17
LSM7-203ENST00000585409 HMMRO75330 724 aa28.59■■■□□ 2.17
LSM7-203ENST00000585409 FAM43AQ8N2R8 423 aa28.59■■■□□ 2.17
LSM7-203ENST00000585409 TBC1D22AQ8WUA7 517 aa28.59■■■□□ 2.17
LSM7-203ENST00000585409 ZFYVE28Q9HCC9 887 aa28.59■■■□□ 2.17
LSM7-203ENST00000585409 IL15P40933 162 aaPredicted RBP28.58■■■□□ 2.17
LSM7-203ENST00000585409 HABP4Q5JVS0 413 aaKnown RBP28.58■■■□□ 2.17
LSM7-203ENST00000585409 VGLL2Q8N8G2 317 aa28.58■■■□□ 2.17
LSM7-203ENST00000585409 KLHDC4Q8TBB5 520 aa28.58■■■□□ 2.17
LSM7-203ENST00000585409 OTUD5Q96G74 571 aa28.58■■■□□ 2.17
LSM7-203ENST00000585409 IQSEC3Q9UPP2 1182 aaPredicted RBP28.58■■■□□ 2.17
LSM7-203ENST00000585409 ZSWIM8A7E2V4 1837 aa28.57■■■□□ 2.16
LSM7-203ENST00000585409 SPDYE5A6NIY4 337 aa28.57■■■□□ 2.16
LSM7-203ENST00000585409 AAMPQ13685 434 aa28.57■■■□□ 2.16
LSM7-203ENST00000585409 ARHGEF6Q15052 776 aa28.57■■■□□ 2.16
LSM7-203ENST00000585409 VPS37DQ86XT2 251 aa28.57■■■□□ 2.16
LSM7-203ENST00000585409 G3BP1Q13283 466 aaKnown RBP eCLIP28.56■■■□□ 2.16
LSM7-203ENST00000585409 LRRC24Q50LG9 513 aa28.56■■■□□ 2.16
LSM7-203ENST00000585409 CEP85Q6P2H3 762 aa28.56■■■□□ 2.16
LSM7-203ENST00000585409 SSH3Q8TE77 659 aa28.56■■■□□ 2.16
LSM7-203ENST00000585409 TEKT1Q969V4 418 aa28.56■■■□□ 2.16
LSM7-203ENST00000585409 MRIQ9BWK5 157 aa28.56■■■□□ 2.16
LSM7-203ENST00000585409 SIL1Q9H173 461 aa28.56■■■□□ 2.16
LSM7-203ENST00000585409 SNCAIPQ9Y6H5 919 aa28.56■■■□□ 2.16
LSM7-203ENST00000585409 PNMA6EA0A0J9YXQ4 647 aa28.55■■■□□ 2.16
LSM7-203ENST00000585409 CACNB3P54284 484 aa28.55■■■□□ 2.16
LSM7-203ENST00000585409 CHAF1AQ13111 956 aaPredicted RBP28.55■■■□□ 2.16
LSM7-203ENST00000585409 POLA2Q14181 598 aa28.55■■■□□ 2.16
LSM7-203ENST00000585409 CAVIN4Q5BKX8 364 aa28.55■■■□□ 2.16
LSM7-203ENST00000585409 ZDHHC15Q96MV8 337 aa28.55■■■□□ 2.16
LSM7-203ENST00000585409 ZCCHC17Q9NP64 241 aaKnown RBP28.55■■■□□ 2.16
LSM7-203ENST00000585409 CEP126Q9P2H0 1117 aa28.55■■■□□ 2.16
LSM7-203ENST00000585409 PTCH2Q9Y6C5 1203 aa28.55■■■□□ 2.16
LSM7-203ENST00000585409 MYH13Q9UKX3 1938 aa28.55■■■□□ 2.16
LSM7-203ENST00000585409 PDE8BO95263 885 aa28.54■■■□□ 2.16
LSM7-203ENST00000585409 CENPBP07199 599 aaPredicted RBP28.54■■■□□ 2.16
LSM7-203ENST00000585409 FKBP1CQ5VVH2 108 aa28.54■■■□□ 2.16
LSM7-203ENST00000585409 FAM83AQ86UY5 434 aa28.54■■■□□ 2.16
LSM7-203ENST00000585409 TMEM106CQ9BVX2 250 aa28.54■■■□□ 2.16
LSM7-203ENST00000585409 SLC9C1Q4G0N8 1177 aa28.53■■■□□ 2.16
LSM7-203ENST00000585409 ERO1BQ86YB8 467 aa28.53■■■□□ 2.16
LSM7-203ENST00000585409 PA2G4Q9UQ80 394 aaKnown RBP28.53■■■□□ 2.16
LSM7-203ENST00000585409 RPAP1Q9BWH6 1393 aaPredicted RBP28.52■■■□□ 2.16
LSM7-203ENST00000585409 TLR2O60603 784 aa28.52■■■□□ 2.16
LSM7-203ENST00000585409 CETPP11597 493 aa28.52■■■□□ 2.16
LSM7-203ENST00000585409 OS9Q13438 667 aaPredicted RBP28.52■■■□□ 2.16
LSM7-203ENST00000585409 HSP90AB4PQ58FF6 505 aa28.52■■■□□ 2.16
LSM7-203ENST00000585409 APOBEC3HQ6NTF7 200 aaKnown RBP28.52■■■□□ 2.16
LSM7-203ENST00000585409 NBPF11Q86T75 865 aa28.52■■■□□ 2.16
LSM7-203ENST00000585409 CRBNQ96SW2 442 aa28.52■■■□□ 2.16
LSM7-203ENST00000585409 SUGT1Q9Y2Z0 365 aa28.52■■■□□ 2.16
LSM7-203ENST00000585409 FRAT2O75474 233 aaPredicted RBP28.51■■■□□ 2.15
LSM7-203ENST00000585409 BCAMP50895 628 aa28.51■■■□□ 2.15
LSM7-203ENST00000585409 PUM3Q15397 648 aaKnown RBP28.51■■■□□ 2.15
LSM7-203ENST00000585409 WRNIP1Q96S55 665 aa28.51■■■□□ 2.15
LSM7-203ENST00000585409 BTBD19C9JJ37 291 aa28.5■■■□□ 2.15
LSM7-203ENST00000585409 IRF6O14896 467 aa28.5■■■□□ 2.15
LSM7-203ENST00000585409 ATG9AQ7Z3C6 839 aa28.5■■■□□ 2.15
LSM7-203ENST00000585409 ZKSCAN4Q969J2 545 aaPredicted RBP28.5■■■□□ 2.15
LSM7-203ENST00000585409 HOOK2Q96ED9 719 aa28.5■■■□□ 2.15
LSM7-203ENST00000585409 TMOD2Q9NZR1 351 aa28.5■■■□□ 2.15
LSM7-203ENST00000585409 MAST3O60307 1309 aa28.49■■■□□ 2.15
LSM7-203ENST00000585409 SURF6O75683 361 aaKnown RBP28.49■■■□□ 2.15
LSM7-203ENST00000585409 IFIT1P09914 478 aaKnown RBP28.49■■■□□ 2.15
LSM7-203ENST00000585409 FGFR2P21802 821 aa28.49■■■□□ 2.15
LSM7-203ENST00000585409 SNAPC2Q13487 334 aa28.49■■■□□ 2.15
LSM7-203ENST00000585409 HHIPL2Q6UWX4 724 aa28.49■■■□□ 2.15
LSM7-203ENST00000585409 AKAP2Q9Y2D5 859 aa28.49■■■□□ 2.15
LSM7-203ENST00000585409 WDHD1O75717 1129 aaPredicted RBP28.48■■■□□ 2.15
LSM7-203ENST00000585409 SLC5A1P13866 664 aa28.48■■■□□ 2.15
LSM7-203ENST00000585409 LACTBP83111 547 aaPredicted RBP28.48■■■□□ 2.15
LSM7-203ENST00000585409 PPIL2Q13356 520 aa28.48■■■□□ 2.15
LSM7-203ENST00000585409 ARHGAP39Q9C0H5 1083 aa28.48■■■□□ 2.15
LSM7-203ENST00000585409 ERC1Q8IUD2 1116 aa28.47■■■□□ 2.15
LSM7-203ENST00000585409 LPIN2Q92539 896 aa28.47■■■□□ 2.15
LSM7-203ENST00000585409 NOP58Q9Y2X3 529 aaKnown RBP28.47■■■□□ 2.15
LSM7-203ENST00000585409 GNRH1P01148 92 aa28.46■■■□□ 2.15
LSM7-203ENST00000585409 DCAF15Q66K64 600 aa28.46■■■□□ 2.15
LSM7-203ENST00000585409 KIF22Q14807 665 aa28.45■■■□□ 2.14
LSM7-203ENST00000585409 ATP2B3Q16720 1220 aa28.45■■■□□ 2.14
LSM7-203ENST00000585409 PPATQ06203 517 aa28.44■■■□□ 2.14
LSM7-203ENST00000585409 SLC4A8Q2Y0W8 1093 aa28.44■■■□□ 2.14
LSM7-203ENST00000585409 ZNF341Q9BYN7 854 aa28.44■■■□□ 2.14
LSM7-203ENST00000585409 AK9Q5TCS8 1911 aa28.43■■■□□ 2.14
LSM7-203ENST00000585409 PRMT2P55345 433 aa28.43■■■□□ 2.14
LSM7-203ENST00000585409 SH3TC2Q8TF17 1288 aa28.43■■■□□ 2.14
LSM7-203ENST00000585409 FXR1P51114 621 aaKnown RBP eCLIP28.42■■■□□ 2.14
LSM7-203ENST00000585409 C17orf99Q6UX52 265 aa28.42■■■□□ 2.14
LSM7-203ENST00000585409 INPP5BP32019 993 aa28.41■■■□□ 2.14
LSM7-203ENST00000585409 TFCP2Q12800 502 aa28.41■■■□□ 2.14
LSM7-203ENST00000585409 MIGA2Q7L4E1 593 aa28.41■■■□□ 2.14
LSM7-203ENST00000585409 WDR66Q8TBY9 1149 aa28.41■■■□□ 2.14
LSM7-203ENST00000585409 FAM151AQ8WW52 585 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms