RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 OTUD5Q96G74 571 aa18.71■□□□□ 0.59
VAPA-209ENST00000585042 CDCA7LQ96GN5 454 aa18.71■□□□□ 0.59
VAPA-209ENST00000585042 WRNIP1Q96S55 665 aa18.71■□□□□ 0.59
VAPA-209ENST00000585042 SNCAIPQ9Y6H5 919 aa18.71■□□□□ 0.59
VAPA-209ENST00000585042 SALL1Q9NSC2 1324 aa18.71■□□□□ 0.59
VAPA-209ENST00000585042 IL15P40933 162 aaPredicted RBP18.7■□□□□ 0.58
VAPA-209ENST00000585042 PPATQ06203 517 aa18.7■□□□□ 0.58
VAPA-209ENST00000585042 PPIL2Q13356 520 aa18.7■□□□□ 0.58
VAPA-209ENST00000585042 SNAPC2Q13487 334 aa18.7■□□□□ 0.58
VAPA-209ENST00000585042 ATP2B3Q16720 1220 aa18.7■□□□□ 0.58
VAPA-209ENST00000585042 ZNF341Q9BYN7 854 aa18.7■□□□□ 0.58
VAPA-209ENST00000585042 PCDH10Q9P2E7 1040 aa18.7■□□□□ 0.58
VAPA-209ENST00000585042 NOB1Q9ULX3 412 aaKnown RBP18.7■□□□□ 0.58
VAPA-209ENST00000585042 FAM43AQ8N2R8 423 aa18.69■□□□□ 0.58
VAPA-209ENST00000585042 ARHGAP45Q92619 1136 aa18.69■□□□□ 0.58
VAPA-209ENST00000585042 ZNF112Q9UJU3 913 aa18.69■□□□□ 0.58
VAPA-209ENST00000585042 DENND2AQ9ULE3 1009 aa18.69■□□□□ 0.58
VAPA-209ENST00000585042 TLR2O60603 784 aa18.68■□□□□ 0.58
VAPA-209ENST00000585042 GNRH1P01148 92 aa18.68■□□□□ 0.58
VAPA-209ENST00000585042 LDHBP07195 334 aaKnown RBP18.68■□□□□ 0.58
VAPA-209ENST00000585042 NBPF11Q86T75 865 aa18.68■□□□□ 0.58
VAPA-209ENST00000585042 ZGPATQ8N5A5 531 aaKnown RBP18.68■□□□□ 0.58
VAPA-209ENST00000585042 ZKSCAN4Q969J2 545 aaPredicted RBP18.68■□□□□ 0.58
VAPA-209ENST00000585042 COPRSQ9NQ92 184 aa18.68■□□□□ 0.58
VAPA-209ENST00000585042 DAGLAQ9Y4D2 1042 aa18.68■□□□□ 0.58
VAPA-209ENST00000585042 IRF6O14896 467 aa18.67■□□□□ 0.58
VAPA-209ENST00000585042 CDC42EP5Q6NZY7 148 aa18.67■□□□□ 0.58
VAPA-209ENST00000585042 MYH13Q9UKX3 1938 aa18.66■□□□□ 0.58
VAPA-209ENST00000585042 HTTP42858 3142 aa18.66■□□□□ 0.58
VAPA-209ENST00000585042 BTBD19C9JJ37 291 aa18.66■□□□□ 0.58
VAPA-209ENST00000585042 KIF22Q14807 665 aa18.66■□□□□ 0.58
VAPA-209ENST00000585042 SIL1Q9H173 461 aa18.66■□□□□ 0.58
VAPA-209ENST00000585042 POTEFA5A3E0 1075 aa18.65■□□□□ 0.58
VAPA-209ENST00000585042 PRDX5P30044 214 aa18.65■□□□□ 0.58
VAPA-209ENST00000585042 PRMT2P55345 433 aa18.65■□□□□ 0.58
VAPA-209ENST00000585042 MIGA2Q7L4E1 593 aa18.65■□□□□ 0.58
VAPA-209ENST00000585042 GCC1Q96CN9 775 aa18.65■□□□□ 0.58
VAPA-209ENST00000585042 USP40Q9NVE5 1235 aa18.65■□□□□ 0.58
VAPA-209ENST00000585042 LRRFIP2Q9Y608 721 aaKnown RBP18.65■□□□□ 0.58
VAPA-209ENST00000585042 PDS5AQ29RF7 1337 aaKnown RBP18.65■□□□□ 0.58
VAPA-209ENST00000585042 RBBP6Q7Z6E9 1792 aaKnown RBP18.64■□□□□ 0.57
VAPA-209ENST00000585042 CCER2I3L3R5 266 aa18.64■□□□□ 0.57
VAPA-209ENST00000585042 GNAI3P08754 354 aa18.64■□□□□ 0.57
VAPA-209ENST00000585042 RARSP54136 660 aaKnown RBP18.64■□□□□ 0.57
VAPA-209ENST00000585042 CAP1Q01518 475 aa18.64■□□□□ 0.57
VAPA-209ENST00000585042 DIXDC1Q155Q3 683 aa18.64■□□□□ 0.57
VAPA-209ENST00000585042 NOL9Q5SY16 702 aaKnown RBP18.64■□□□□ 0.57
VAPA-209ENST00000585042 ANKRD23Q86SG2 305 aa18.64■□□□□ 0.57
VAPA-209ENST00000585042 SLF2Q8IX21 1173 aa18.64■□□□□ 0.57
VAPA-209ENST00000585042 FAM163AQ96GL9 167 aaPredicted RBP18.64■□□□□ 0.57
VAPA-209ENST00000585042 ZNF333Q96JL9 665 aa18.64■□□□□ 0.57
VAPA-209ENST00000585042 TMEM106CQ9BVX2 250 aa18.64■□□□□ 0.57
VAPA-209ENST00000585042 KCNH4Q9UQ05 1017 aa18.64■□□□□ 0.57
VAPA-209ENST00000585042 AKAP2Q9Y2D5 859 aa18.64■□□□□ 0.57
VAPA-209ENST00000585042 ENTPD3O75355 529 aa18.63■□□□□ 0.57
VAPA-209ENST00000585042 INPP5BP32019 993 aa18.63■□□□□ 0.57
VAPA-209ENST00000585042 PHKA1P46020 1223 aa18.63■□□□□ 0.57
VAPA-209ENST00000585042 LACTBP83111 547 aaPredicted RBP18.63■□□□□ 0.57
VAPA-209ENST00000585042 SLC9C1Q4G0N8 1177 aa18.63■□□□□ 0.57
VAPA-209ENST00000585042 CCDC102BQ68D86 513 aa18.63■□□□□ 0.57
VAPA-209ENST00000585042 IDI2Q9BXS1 227 aa18.63■□□□□ 0.57
VAPA-209ENST00000585042 FAM198AQ9UFP1 575 aa18.63■□□□□ 0.57
VAPA-209ENST00000585042 TCP10Q12799 353 aa18.62■□□□□ 0.57
VAPA-209ENST00000585042 MTX1Q13505 466 aa18.62■□□□□ 0.57
VAPA-209ENST00000585042 SPTY2D1Q68D10 685 aaPredicted RBP18.62■□□□□ 0.57
VAPA-209ENST00000585042 C17orf99Q6UX52 265 aa18.62■□□□□ 0.57
VAPA-209ENST00000585042 GAKO14976 1311 aa18.61■□□□□ 0.57
VAPA-209ENST00000585042 CXCL11O14625 94 aa18.61■□□□□ 0.57
VAPA-209ENST00000585042 IPO8O15397 1037 aaKnown RBP18.61■□□□□ 0.57
VAPA-209ENST00000585042 MAP3K10Q02779 954 aa18.61■□□□□ 0.57
VAPA-209ENST00000585042 NFIAQ12857 509 aa18.61■□□□□ 0.57
VAPA-209ENST00000585042 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.61■□□□□ 0.57
VAPA-209ENST00000585042 MEIS3Q99687 375 aa18.61■□□□□ 0.57
VAPA-209ENST00000585042 PA2G4Q9UQ80 394 aaKnown RBP18.61■□□□□ 0.57
VAPA-209ENST00000585042 PTCH2Q9Y6C5 1203 aa18.61■□□□□ 0.57
VAPA-209ENST00000585042 KIAA0100Q14667 2235 aaKnown RBP18.61■□□□□ 0.57
VAPA-209ENST00000585042 TIMM10P62072 90 aa18.6■□□□□ 0.57
VAPA-209ENST00000585042 AK9Q5TCS8 1911 aa18.6■□□□□ 0.57
VAPA-209ENST00000585042 CENPFP49454 3210 aa18.59■□□□□ 0.57
VAPA-209ENST00000585042 PDHXO00330 501 aa18.59■□□□□ 0.57
VAPA-209ENST00000585042 MAP4K4O95819 1239 aaPredicted RBP18.59■□□□□ 0.57
VAPA-209ENST00000585042 EN2P19622 333 aaPredicted RBP18.59■□□□□ 0.57
VAPA-209ENST00000585042 HOXD10P28358 340 aa18.59■□□□□ 0.57
VAPA-209ENST00000585042 MVPQ14764 893 aaKnown RBP18.59■□□□□ 0.57
VAPA-209ENST00000585042 PHF20L1A8MW92 1017 aa18.58■□□□□ 0.56
VAPA-209ENST00000585042 SRGAP3O43295 1099 aa18.58■□□□□ 0.56
VAPA-209ENST00000585042 ADORA1P30542 326 aa18.58■□□□□ 0.56
VAPA-209ENST00000585042 RASGRF1Q13972 1273 aa18.58■□□□□ 0.56
VAPA-209ENST00000585042 DZIP1Q86YF9 867 aaKnown RBP18.58■□□□□ 0.56
VAPA-209ENST00000585042 MYH2Q9UKX2 1941 aa18.57■□□□□ 0.56
VAPA-209ENST00000585042 A0A1B0GUL7 405 aa18.57■□□□□ 0.56
VAPA-209ENST00000585042 RGS3P49796 1198 aa18.57■□□□□ 0.56
VAPA-209ENST00000585042 MOGSQ13724 837 aa18.57■□□□□ 0.56
VAPA-209ENST00000585042 FASTKD5Q7L8L6 764 aaKnown RBP18.57■□□□□ 0.56
VAPA-209ENST00000585042 ZFPM1Q8IX07 1006 aa18.57■□□□□ 0.56
VAPA-209ENST00000585042 XAGE2Q96GT9 111 aa18.57■□□□□ 0.56
VAPA-209ENST00000585042 ABCF2Q9UG63 623 aa18.57■□□□□ 0.56
VAPA-209ENST00000585042 ATRNL1Q5VV63 1379 aa18.56■□□□□ 0.56
VAPA-209ENST00000585042 ADGRA2Q96PE1 1338 aa18.56■□□□□ 0.56
VAPA-209ENST00000585042 CTNND1O60716 968 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms