RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	ZNF804B	A4D1E1	1349 aa		7	□□□□□ -1.29
MSI2-216	ENST00000582772	CEMIP	Q8WUJ3	1361 aa		6.99	□□□□□ -1.29
MSI2-216	ENST00000582772	SPDYE5	A6NIY4	337 aa		6.99	□□□□□ -1.29
MSI2-216	ENST00000582772	FAM177B	A6PVY3	158 aa		6.99	□□□□□ -1.29
MSI2-216	ENST00000582772	ZIC2	O95409	532 aa	Predicted RBP	6.99	□□□□□ -1.29
MSI2-216	ENST00000582772	A1BG	P04217	495 aa		6.99	□□□□□ -1.29
MSI2-216	ENST00000582772	SSTR3	P32745	418 aa	Predicted RBP	6.99	□□□□□ -1.29
MSI2-216	ENST00000582772	RTP1	P59025	263 aa		6.99	□□□□□ -1.29
MSI2-216	ENST00000582772	SNX17	Q15036	470 aa		6.99	□□□□□ -1.29
MSI2-216	ENST00000582772	RAB30	Q15771	203 aa		6.99	□□□□□ -1.29
MSI2-216	ENST00000582772	MCTP2	Q6DN12	878 aa		6.99	□□□□□ -1.29
MSI2-216	ENST00000582772	SAMD1	Q6SPF0	538 aa	Predicted RBP	6.99	□□□□□ -1.29
MSI2-216	ENST00000582772	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	6.99	□□□□□ -1.29
MSI2-216	ENST00000582772	ANKRD23	Q86SG2	305 aa		6.99	□□□□□ -1.29
MSI2-216	ENST00000582772	EYA3	Q99504	573 aa		6.99	□□□□□ -1.29
MSI2-216	ENST00000582772	PDLIM7	Q9NR12	457 aa		6.99	□□□□□ -1.29
MSI2-216	ENST00000582772	RNF216	Q9NWF9	866 aa	Predicted RBP	6.99	□□□□□ -1.29
MSI2-216	ENST00000582772	AOX1	Q06278	1338 aa		6.99	□□□□□ -1.29
MSI2-216	ENST00000582772	RPAP1	Q9BWH6	1393 aa	Predicted RBP	6.98	□□□□□ -1.29
MSI2-216	ENST00000582772	SNAPC2	Q13487	334 aa		6.98	□□□□□ -1.29
MSI2-216	ENST00000582772	DOK7	Q18PE1	504 aa		6.98	□□□□□ -1.29
MSI2-216	ENST00000582772	HERC4	Q5GLZ8	1057 aa	Predicted RBP	6.98	□□□□□ -1.29
MSI2-216	ENST00000582772	LHX8	Q68G74	356 aa		6.98	□□□□□ -1.29
MSI2-216	ENST00000582772	SUGP1	Q8IWZ8	645 aa	Known RBP	6.98	□□□□□ -1.29
MSI2-216	ENST00000582772	MICALL1	Q8N3F8	863 aa		6.98	□□□□□ -1.29
MSI2-216	ENST00000582772	NKD2	Q969F2	451 aa	Predicted RBP	6.98	□□□□□ -1.29
MSI2-216	ENST00000582772	POLL	Q9UGP5	575 aa		6.98	□□□□□ -1.29
MSI2-216	ENST00000582772	KCNH4	Q9UQ05	1017 aa		6.98	□□□□□ -1.29
MSI2-216	ENST00000582772	PHIP	Q8WWQ0	1821 aa		6.97	□□□□□ -1.29
MSI2-216	ENST00000582772	C19orf67	A6NJJ6	358 aa		6.97	□□□□□ -1.29
MSI2-216	ENST00000582772	KRT38	O76015	456 aa		6.97	□□□□□ -1.29
MSI2-216	ENST00000582772	VGLL4	Q14135	290 aa		6.97	□□□□□ -1.29
MSI2-216	ENST00000582772	LEXM	Q3ZCV2	418 aa		6.97	□□□□□ -1.29
MSI2-216	ENST00000582772	FBXL6	Q8N531	539 aa		6.97	□□□□□ -1.29
MSI2-216	ENST00000582772	NLRP3	Q96P20	1036 aa		6.97	□□□□□ -1.29
MSI2-216	ENST00000582772	MYO3B	Q8WXR4	1341 aa		6.97	□□□□□ -1.29
MSI2-216	ENST00000582772	MYO18B	Q8IUG5	2567 aa		6.97	□□□□□ -1.29
MSI2-216	ENST00000582772	COL4A4	P53420	1690 aa	Predicted RBP	6.96	□□□□□ -1.29
MSI2-216	ENST00000582772	TRIM43B	A6NCK2	446 aa		6.96	□□□□□ -1.3
MSI2-216	ENST00000582772	TNPO2	O14787	897 aa	Known RBP	6.96	□□□□□ -1.3
MSI2-216	ENST00000582772	RIMBP2	O15034	1052 aa		6.96	□□□□□ -1.3
MSI2-216	ENST00000582772	NPM3	O75607	178 aa	Known RBP	6.96	□□□□□ -1.3
MSI2-216	ENST00000582772	SASH1	O94885	1247 aa		6.96	□□□□□ -1.3
MSI2-216	ENST00000582772	NTSR2	O95665	410 aa		6.96	□□□□□ -1.3
MSI2-216	ENST00000582772	GRAP	Q13588	217 aa		6.96	□□□□□ -1.3
MSI2-216	ENST00000582772	HLF	Q16534	295 aa		6.96	□□□□□ -1.3
MSI2-216	ENST00000582772	SLC10A5	Q5PT55	438 aa		6.96	□□□□□ -1.3
MSI2-216	ENST00000582772	C1orf53	Q5VUE5	145 aa		6.96	□□□□□ -1.3
MSI2-216	ENST00000582772	OGFOD1	Q8N543	542 aa		6.96	□□□□□ -1.3
MSI2-216	ENST00000582772	GRAPL	Q8TC17	118 aa	Predicted RBP	6.96	□□□□□ -1.3
MSI2-216	ENST00000582772	TRIM43	Q96BQ3	446 aa	Predicted RBP	6.96	□□□□□ -1.3
MSI2-216	ENST00000582772	GGNBP2	Q9H3C7	697 aa		6.96	□□□□□ -1.3
MSI2-216	ENST00000582772	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	6.96	□□□□□ -1.3
MSI2-216	ENST00000582772	UBN2	Q6ZU65	1347 aa		6.96	□□□□□ -1.3
MSI2-216	ENST00000582772	SH3TC1	Q8TE82	1336 aa		6.96	□□□□□ -1.3
MSI2-216	ENST00000582772	OTOGL	Q3ZCN5	2332 aa		6.95	□□□□□ -1.3
MSI2-216	ENST00000582772	GTPBP6	O43824	516 aa	Predicted RBP	6.95	□□□□□ -1.3
MSI2-216	ENST00000582772	ADRB1	P08588	477 aa		6.95	□□□□□ -1.3
MSI2-216	ENST00000582772	TRIM32	Q13049	653 aa		6.95	□□□□□ -1.3
MSI2-216	ENST00000582772	EIF4A2	Q14240	407 aa	Known RBP	6.95	□□□□□ -1.3
MSI2-216	ENST00000582772	NBPF12	Q5TAG4	269 aa	Predicted RBP	6.95	□□□□□ -1.3
MSI2-216	ENST00000582772	TTC5	Q8N0Z6	440 aa		6.95	□□□□□ -1.3
MSI2-216	ENST00000582772	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	6.95	□□□□□ -1.3
MSI2-216	ENST00000582772	PARK7	Q99497	189 aa	Known RBP	6.95	□□□□□ -1.3
MSI2-216	ENST00000582772	SENP6	Q9GZR1	1112 aa	Predicted RBP	6.95	□□□□□ -1.3
MSI2-216	ENST00000582772	SLC28A3	Q9HAS3	691 aa		6.95	□□□□□ -1.3
MSI2-216	ENST00000582772	PRKAG3	Q9UGI9	489 aa		6.95	□□□□□ -1.3
MSI2-216	ENST00000582772	MSRA	Q9UJ68	235 aa		6.95	□□□□□ -1.3
MSI2-216	ENST00000582772	LAMA5	O15230	3695 aa		6.95	□□□□□ -1.3
MSI2-216	ENST00000582772	CEP295	Q9C0D2	2601 aa		6.94	□□□□□ -1.3
MSI2-216	ENST00000582772	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	6.94	□□□□□ -1.3
MSI2-216	ENST00000582772	USP17L3	A6NCW0	530 aa		6.94	□□□□□ -1.3
MSI2-216	ENST00000582772	USP17L4	A6NCW7	530 aa		6.94	□□□□□ -1.3
MSI2-216	ENST00000582772		H0Y858	1186 aa		6.94	□□□□□ -1.3
MSI2-216	ENST00000582772	PDHX	O00330	501 aa		6.94	□□□□□ -1.3
MSI2-216	ENST00000582772	IRF6	O14896	467 aa		6.94	□□□□□ -1.3
MSI2-216	ENST00000582772	RNMT	O43148	476 aa	Known RBP	6.94	□□□□□ -1.3
MSI2-216	ENST00000582772	FPGS	Q05932	587 aa		6.94	□□□□□ -1.3
MSI2-216	ENST00000582772	ZP2	Q05996	745 aa		6.94	□□□□□ -1.3
MSI2-216	ENST00000582772	DMWD	Q09019	674 aa		6.94	□□□□□ -1.3
MSI2-216	ENST00000582772	PPIL2	Q13356	520 aa		6.94	□□□□□ -1.3
MSI2-216	ENST00000582772	PUS10	Q3MIT2	529 aa	Known RBP	6.94	□□□□□ -1.3
MSI2-216	ENST00000582772	CCDC129	Q6ZRS4	1044 aa		6.94	□□□□□ -1.3
MSI2-216	ENST00000582772	USP17L1	Q7RTZ2	530 aa		6.94	□□□□□ -1.3
MSI2-216	ENST00000582772	ERO1B	Q86YB8	467 aa		6.94	□□□□□ -1.3
MSI2-216	ENST00000582772	TBC1D16	Q8TBP0	767 aa		6.94	□□□□□ -1.3
MSI2-216	ENST00000582772	EDA	Q92838	391 aa		6.94	□□□□□ -1.3
MSI2-216	ENST00000582772	PBXIP1	Q96AQ6	731 aa		6.94	□□□□□ -1.3
MSI2-216	ENST00000582772	UPF3B	Q9BZI7	483 aa	Known RBP	6.94	□□□□□ -1.3
MSI2-216	ENST00000582772	LGR6	Q9HBX8	967 aa		6.94	□□□□□ -1.3
MSI2-216	ENST00000582772	PRDM5	Q9NQX1	630 aa	Predicted RBP	6.94	□□□□□ -1.3
MSI2-216	ENST00000582772	TLR9	Q9NR96	1032 aa		6.94	□□□□□ -1.3
MSI2-216	ENST00000582772	ITPR1	Q14643	2758 aa		6.94	□□□□□ -1.3
MSI2-216	ENST00000582772	TENM4	Q6N022	2769 aa		6.94	□□□□□ -1.3
MSI2-216	ENST00000582772	DSP	P15924	2871 aa	Known RBP	6.94	□□□□□ -1.3
MSI2-216	ENST00000582772	GRXCR2	A6NFK2	248 aa		6.93	□□□□□ -1.3
MSI2-216	ENST00000582772	TMEM221	A6NGB7	291 aa		6.93	□□□□□ -1.3
MSI2-216	ENST00000582772	GRXCR1	A8MXD5	290 aa		6.93	□□□□□ -1.3
MSI2-216	ENST00000582772	ERVV-1	B6SEH8	477 aa		6.93	□□□□□ -1.3
MSI2-216	ENST00000582772		M0R296	226 aa		6.93	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms