RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 ALDH8A1Q9H2A2 487 aaPredicted RBP10.99□□□□□ -0.65
SS18-220ENST00000582092 NAP1L2Q9ULW6 460 aaPredicted RBP10.99□□□□□ -0.65
SS18-220ENST00000582092 IQSEC3Q9UPP2 1182 aaPredicted RBP10.99□□□□□ -0.65
SS18-220ENST00000582092 LEMD3Q9Y2U8 911 aa10.99□□□□□ -0.65
SS18-220ENST00000582092 ZNF804BA4D1E1 1349 aa10.99□□□□□ -0.65
SS18-220ENST00000582092 SNAP23O00161 211 aa10.98□□□□□ -0.65
SS18-220ENST00000582092 RIMBP2O15034 1052 aa10.98□□□□□ -0.65
SS18-220ENST00000582092 CPA1P15085 419 aa10.98□□□□□ -0.65
SS18-220ENST00000582092 CYP7A1P22680 504 aa10.98□□□□□ -0.65
SS18-220ENST00000582092 CXCL9Q07325 125 aa10.98□□□□□ -0.65
SS18-220ENST00000582092 SKOR2Q2VWA4 1001 aaPredicted RBP10.98□□□□□ -0.65
SS18-220ENST00000582092 USP50Q70EL3 339 aaPredicted RBP10.98□□□□□ -0.65
SS18-220ENST00000582092 DHX32Q7L7V1 743 aaKnown RBP10.98□□□□□ -0.65
SS18-220ENST00000582092 ZNF804AQ7Z570 1209 aa10.98□□□□□ -0.65
SS18-220ENST00000582092 ZGPATQ8N5A5 531 aaKnown RBP10.98□□□□□ -0.65
SS18-220ENST00000582092 TBC1D16Q8TBP0 767 aa10.98□□□□□ -0.65
SS18-220ENST00000582092 TTC14Q96N46 770 aa10.98□□□□□ -0.65
SS18-220ENST00000582092 NOL10Q9BSC4 688 aaKnown RBP10.98□□□□□ -0.65
SS18-220ENST00000582092 PUS7LQ9H0K6 701 aaKnown RBP10.98□□□□□ -0.65
SS18-220ENST00000582092 KIF3AQ9Y496 699 aa10.98□□□□□ -0.65
SS18-220ENST00000582092 H7C1D1 291 aa10.97□□□□□ -0.65
SS18-220ENST00000582092 CYP21A2P08686 494 aa10.97□□□□□ -0.65
SS18-220ENST00000582092 NCLP19338 710 aaKnown RBP10.97□□□□□ -0.65
SS18-220ENST00000582092 CHAF1AQ13111 956 aaPredicted RBP10.97□□□□□ -0.65
SS18-220ENST00000582092 SLFNL1Q499Z3 407 aa10.97□□□□□ -0.65
SS18-220ENST00000582092 Q6ZUG5 572 aa10.97□□□□□ -0.65
SS18-220ENST00000582092 CCDC83Q8IWF9 413 aa10.97□□□□□ -0.65
SS18-220ENST00000582092 NCOA7Q8NI08 942 aa10.97□□□□□ -0.65
SS18-220ENST00000582092 LARP6Q9BRS8 491 aaKnown RBP10.97□□□□□ -0.65
SS18-220ENST00000582092 NAPBQ9H115 298 aa10.97□□□□□ -0.65
SS18-220ENST00000582092 POLLQ9UGP5 575 aa10.97□□□□□ -0.65
SS18-220ENST00000582092 WDR33Q9C0J8 1336 aaKnown RBP10.97□□□□□ -0.65
SS18-220ENST00000582092 LTBP1Q14766 1721 aa10.96□□□□□ -0.65
SS18-220ENST00000582092 MAGEB6P1A0A0J9YX57 407 aa10.96□□□□□ -0.65
SS18-220ENST00000582092 PATL2C9JE40 543 aaKnown RBP10.96□□□□□ -0.65
SS18-220ENST00000582092 E7EWF7 191 aa10.96□□□□□ -0.65
SS18-220ENST00000582092 ECE2O60344 883 aa10.96□□□□□ -0.65
SS18-220ENST00000582092 RAD17O75943 681 aa10.96□□□□□ -0.65
SS18-220ENST00000582092 MBD4O95243 580 aa10.96□□□□□ -0.65
SS18-220ENST00000582092 FGAP02671 866 aa10.96□□□□□ -0.65
SS18-220ENST00000582092 CHGBP05060 677 aa10.96□□□□□ -0.65
SS18-220ENST00000582092 PDCP20941 246 aa10.96□□□□□ -0.65
SS18-220ENST00000582092 RPS12P25398 132 aaKnown RBP10.96□□□□□ -0.65
SS18-220ENST00000582092 DDIT3P35638 169 aa10.96□□□□□ -0.65
SS18-220ENST00000582092 TDO2P48775 406 aa10.96□□□□□ -0.65
SS18-220ENST00000582092 NAA16Q6N069 864 aaPredicted RBP10.96□□□□□ -0.65
SS18-220ENST00000582092 TMED8Q6PL24 325 aaPredicted RBP10.96□□□□□ -0.65
SS18-220ENST00000582092 FBXO33Q7Z6M2 555 aa10.96□□□□□ -0.65
SS18-220ENST00000582092 FAM84BQ96KN1 310 aaPredicted RBP10.96□□□□□ -0.65
SS18-220ENST00000582092 DBNDD1Q9H9R9 158 aa10.96□□□□□ -0.65
SS18-220ENST00000582092 ADARB2Q9NS39 739 aaKnown RBP10.96□□□□□ -0.65
SS18-220ENST00000582092 GPRC5DQ9NZD1 345 aa10.96□□□□□ -0.65
SS18-220ENST00000582092 ATP6V1DQ9Y5K8 247 aa10.96□□□□□ -0.65
SS18-220ENST00000582092 COL4A5P29400 1685 aa10.95□□□□□ -0.66
SS18-220ENST00000582092 DUOX1Q9NRD9 1551 aa10.95□□□□□ -0.66
SS18-220ENST00000582092 RPAP1Q9BWH6 1393 aaPredicted RBP10.95□□□□□ -0.66
SS18-220ENST00000582092 MCM5P33992 734 aa10.95□□□□□ -0.66
SS18-220ENST00000582092 SCNN1DP51172 638 aa10.95□□□□□ -0.66
SS18-220ENST00000582092 HAND2P61296 217 aa10.95□□□□□ -0.66
SS18-220ENST00000582092 PODNQ7Z5L7 613 aa10.95□□□□□ -0.66
SS18-220ENST00000582092 WDR66Q8TBY9 1149 aa10.95□□□□□ -0.66
SS18-220ENST00000582092 DPF2Q92785 391 aa10.95□□□□□ -0.66
SS18-220ENST00000582092 SLC4A4Q9Y6R1 1079 aa10.95□□□□□ -0.66
SS18-220ENST00000582092 TRPM7Q96QT4 1865 aa10.95□□□□□ -0.66
SS18-220ENST00000582092 PSME4Q14997 1843 aa10.95□□□□□ -0.66
SS18-220ENST00000582092 DHX16O60231 1041 aaKnown RBP10.94□□□□□ -0.66
SS18-220ENST00000582092 IGSF3O75054 1194 aa10.94□□□□□ -0.66
SS18-220ENST00000582092 LDHCP07864 332 aa10.94□□□□□ -0.66
SS18-220ENST00000582092 EPS15P42566 896 aa10.94□□□□□ -0.66
SS18-220ENST00000582092 GMPSP49915 693 aaPredicted RBP10.94□□□□□ -0.66
SS18-220ENST00000582092 GSTO1P78417 241 aa10.94□□□□□ -0.66
SS18-220ENST00000582092 STK3Q13188 491 aa10.94□□□□□ -0.66
SS18-220ENST00000582092 ALX1Q15699 326 aa10.94□□□□□ -0.66
SS18-220ENST00000582092 DOK7Q18PE1 504 aa10.94□□□□□ -0.66
SS18-220ENST00000582092 FOXD4L5Q5VV16 416 aaPredicted RBP10.94□□□□□ -0.66
SS18-220ENST00000582092 TTLL5Q6EMB2 1281 aa10.94□□□□□ -0.66
SS18-220ENST00000582092 DZIP1Q86YF9 867 aaKnown RBP10.94□□□□□ -0.66
SS18-220ENST00000582092 FAM184AQ8NB25 1140 aa10.94□□□□□ -0.66
SS18-220ENST00000582092 FOXD4L4Q8WXT5 416 aaPredicted RBP10.94□□□□□ -0.66
SS18-220ENST00000582092 TCEANC2Q96MN5 208 aa10.94□□□□□ -0.66
SS18-220ENST00000582092 STRBPQ96SI9 672 aaKnown RBP10.94□□□□□ -0.66
SS18-220ENST00000582092 CNNM2Q9H8M5 875 aa10.94□□□□□ -0.66
SS18-220ENST00000582092 ARMT1Q9H993 441 aa10.94□□□□□ -0.66
SS18-220ENST00000582092 TOMM22Q9NS69 142 aa10.94□□□□□ -0.66
SS18-220ENST00000582092 CNOT7Q9UIV1 285 aaKnown RBP10.94□□□□□ -0.66
SS18-220ENST00000582092 ARAP2Q8WZ64 1704 aa10.94□□□□□ -0.66
SS18-220ENST00000582092 PDS5AQ29RF7 1337 aaKnown RBP10.93□□□□□ -0.66
SS18-220ENST00000582092 ERICH2A1L162 156 aa10.93□□□□□ -0.66
SS18-220ENST00000582092 YDJCA8MPS7 323 aa10.93□□□□□ -0.66
SS18-220ENST00000582092 PSMD14O00487 310 aa10.93□□□□□ -0.66
SS18-220ENST00000582092 BAG4O95429 457 aaKnown RBP10.93□□□□□ -0.66
SS18-220ENST00000582092 GJB2P29033 226 aa10.93□□□□□ -0.66
SS18-220ENST00000582092 SART3Q15020 963 aaKnown RBP10.93□□□□□ -0.66
SS18-220ENST00000582092 ME3Q16798 604 aa10.93□□□□□ -0.66
SS18-220ENST00000582092 CSPP1Q1MSJ5 1256 aa10.93□□□□□ -0.66
SS18-220ENST00000582092 LARP1BQ659C4 914 aaKnown RBP10.93□□□□□ -0.66
SS18-220ENST00000582092 MCTP1Q6DN14 999 aa10.93□□□□□ -0.66
SS18-220ENST00000582092 SYNE3Q6ZMZ3 975 aa10.93□□□□□ -0.66
SS18-220ENST00000582092 MFSD6Q6ZSS7 791 aa10.93□□□□□ -0.66
SS18-220ENST00000582092 SLC51AQ86UW1 340 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms