RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 SALL1Q9NSC2 1324 aa16.4■□□□□ 0.22
CSNK1D-220ENST00000581737 PDE4AP27815 886 aa16.39■□□□□ 0.21
CSNK1D-220ENST00000581737 ANP32AP39687 249 aaKnown RBP16.39■□□□□ 0.21
CSNK1D-220ENST00000581737 SPTY2D1Q68D10 685 aaPredicted RBP16.39■□□□□ 0.21
CSNK1D-220ENST00000581737 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.39■□□□□ 0.21
CSNK1D-220ENST00000581737 MXD3Q9BW11 206 aa16.39■□□□□ 0.21
CSNK1D-220ENST00000581737 HMG20BQ9P0W2 317 aa16.39■□□□□ 0.21
CSNK1D-220ENST00000581737 JAG2Q9Y219 1238 aa16.39■□□□□ 0.21
CSNK1D-220ENST00000581737 MCAMP43121 646 aa16.38■□□□□ 0.21
CSNK1D-220ENST00000581737 NUCB1Q02818 461 aa16.38■□□□□ 0.21
CSNK1D-220ENST00000581737 MKRN3Q13064 507 aaKnown RBP16.38■□□□□ 0.21
CSNK1D-220ENST00000581737 NBPF9Q3BBW0 867 aa16.38■□□□□ 0.21
CSNK1D-220ENST00000581737 CHD1LQ86WJ1 897 aa16.38■□□□□ 0.21
CSNK1D-220ENST00000581737 CERS5Q8N5B7 392 aa16.38■□□□□ 0.21
CSNK1D-220ENST00000581737 MYOZ2Q9NPC6 264 aa16.38■□□□□ 0.21
CSNK1D-220ENST00000581737 ECHDC1Q9NTX5 307 aa16.38■□□□□ 0.21
CSNK1D-220ENST00000581737 IGSF3O75054 1194 aa16.37■□□□□ 0.21
CSNK1D-220ENST00000581737 ATP5JP18859 108 aa16.37■□□□□ 0.21
CSNK1D-220ENST00000581737 KIAA0825Q8IV33 1275 aa16.37■□□□□ 0.21
CSNK1D-220ENST00000581737 BACH2Q9BYV9 841 aa16.37■□□□□ 0.21
CSNK1D-220ENST00000581737 LNPKQ9C0E8 428 aa16.37■□□□□ 0.21
CSNK1D-220ENST00000581737 TTC41PQ6P2S7 1318 aa16.37■□□□□ 0.21
CSNK1D-220ENST00000581737 MAST2Q6P0Q8 1798 aa16.36■□□□□ 0.21
CSNK1D-220ENST00000581737 ERC2O15083 957 aa16.36■□□□□ 0.21
CSNK1D-220ENST00000581737 LDHBP07195 334 aaKnown RBP16.36■□□□□ 0.21
CSNK1D-220ENST00000581737 MX1P20591 662 aa16.36■□□□□ 0.21
CSNK1D-220ENST00000581737 TTF2Q9UNY4 1162 aaKnown RBP16.36■□□□□ 0.21
CSNK1D-220ENST00000581737 PAPPA2Q9BXP8 1791 aa16.36■□□□□ 0.21
CSNK1D-220ENST00000581737 GPR25O00155 361 aa16.35■□□□□ 0.21
CSNK1D-220ENST00000581737 FKBP1BP68106 108 aa16.35■□□□□ 0.21
CSNK1D-220ENST00000581737 HDLBPQ00341 1268 aaKnown RBP16.35■□□□□ 0.21
CSNK1D-220ENST00000581737 TTF1Q15361 905 aaPredicted RBP16.35■□□□□ 0.21
CSNK1D-220ENST00000581737 REM2Q8IYK8 340 aaPredicted RBP16.35■□□□□ 0.21
CSNK1D-220ENST00000581737 SNRKQ9NRH2 765 aa16.35■□□□□ 0.21
CSNK1D-220ENST00000581737 ABCF2Q9UG63 623 aa16.35■□□□□ 0.21
CSNK1D-220ENST00000581737 F8W031 263 aaPredicted RBP16.34■□□□□ 0.21
CSNK1D-220ENST00000581737 GLRX3O76003 335 aaKnown RBP16.34■□□□□ 0.21
CSNK1D-220ENST00000581737 ZAP70P43403 619 aa16.34■□□□□ 0.21
CSNK1D-220ENST00000581737 TM4SF4P48230 202 aa16.34■□□□□ 0.21
CSNK1D-220ENST00000581737 PI16Q6UXB8 463 aa16.34■□□□□ 0.21
CSNK1D-220ENST00000581737 ERICH6Q7L0X2 663 aa16.34■□□□□ 0.21
CSNK1D-220ENST00000581737 DZIP1Q86YF9 867 aaKnown RBP16.34■□□□□ 0.21
CSNK1D-220ENST00000581737 SLF2Q8IX21 1173 aa16.34■□□□□ 0.21
CSNK1D-220ENST00000581737 UPF2Q9HAU5 1272 aaKnown RBP16.34■□□□□ 0.21
CSNK1D-220ENST00000581737 SERPINA10Q9UK55 444 aa16.34■□□□□ 0.21
CSNK1D-220ENST00000581737 FZD1Q9UP38 647 aa16.34■□□□□ 0.21
CSNK1D-220ENST00000581737 PITPNM2Q9BZ72 1349 aa16.34■□□□□ 0.21
CSNK1D-220ENST00000581737 DOCK2Q92608 1830 aa16.33■□□□□ 0.21
CSNK1D-220ENST00000581737 TMED8Q6PL24 325 aaPredicted RBP16.33■□□□□ 0.2
CSNK1D-220ENST00000581737 TEKT1Q969V4 418 aa16.33■□□□□ 0.2
CSNK1D-220ENST00000581737 DNAJC2Q99543 621 aaKnown RBP16.33■□□□□ 0.2
CSNK1D-220ENST00000581737 HAUS7Q99871 368 aa16.33■□□□□ 0.2
CSNK1D-220ENST00000581737 MRIQ9BWK5 157 aa16.33■□□□□ 0.2
CSNK1D-220ENST00000581737 LRP2BPQ9P2M1 347 aa16.33■□□□□ 0.2
CSNK1D-220ENST00000581737 STAP2Q9UGK3 403 aa16.33■□□□□ 0.2
CSNK1D-220ENST00000581737 AOX1Q06278 1338 aa16.33■□□□□ 0.2
CSNK1D-220ENST00000581737 SALL3Q9BXA9 1300 aa16.33■□□□□ 0.2
CSNK1D-220ENST00000581737 ECM29Q5VYK3 1845 aa16.33■□□□□ 0.2
CSNK1D-220ENST00000581737 CYP2E1P05181 493 aaPredicted RBP16.32■□□□□ 0.2
CSNK1D-220ENST00000581737 PRDX5P30044 214 aa16.32■□□□□ 0.2
CSNK1D-220ENST00000581737 GSTO1P78417 241 aa16.32■□□□□ 0.2
CSNK1D-220ENST00000581737 DLGAP5Q15398 846 aa16.32■□□□□ 0.2
CSNK1D-220ENST00000581737 PKN2Q16513 984 aaKnown RBP16.32■□□□□ 0.2
CSNK1D-220ENST00000581737 MTMR14Q8NCE2 650 aa16.32■□□□□ 0.2
CSNK1D-220ENST00000581737 BOLA2Q9H3K6 86 aa16.32■□□□□ 0.2
CSNK1D-220ENST00000581737 RAI14Q9P0K7 980 aa16.32■□□□□ 0.2
CSNK1D-220ENST00000581737 MYH2Q9UKX2 1941 aa16.32■□□□□ 0.2
CSNK1D-220ENST00000581737 WNT10BO00744 389 aa16.31■□□□□ 0.2
CSNK1D-220ENST00000581737 MYO1BO43795 1136 aa16.31■□□□□ 0.2
CSNK1D-220ENST00000581737 CRKP46108 304 aa16.31■□□□□ 0.2
CSNK1D-220ENST00000581737 RBM5P52756 815 aaKnown RBP eCLIP16.31■□□□□ 0.2
CSNK1D-220ENST00000581737 PDE1AP54750 535 aa16.31■□□□□ 0.2
CSNK1D-220ENST00000581737 MAP3K12Q12852 859 aa16.31■□□□□ 0.2
CSNK1D-220ENST00000581737 PRKG1Q13976 671 aa16.31■□□□□ 0.2
CSNK1D-220ENST00000581737 TTLL12Q14166 644 aaPredicted RBP16.31■□□□□ 0.2
CSNK1D-220ENST00000581737 FBXO46Q6PJ61 603 aaPredicted RBP16.31■□□□□ 0.2
CSNK1D-220ENST00000581737 OTUD7AQ8TE49 926 aaPredicted RBP16.31■□□□□ 0.2
CSNK1D-220ENST00000581737 PAG1Q9NWQ8 432 aa16.31■□□□□ 0.2
CSNK1D-220ENST00000581737 MYH7P12883 1935 aa16.31■□□□□ 0.2
CSNK1D-220ENST00000581737 GOLIM4O00461 696 aa16.3■□□□□ 0.2
CSNK1D-220ENST00000581737 LDHCP07864 332 aa16.3■□□□□ 0.2
CSNK1D-220ENST00000581737 GRIK5Q16478 980 aa16.3■□□□□ 0.2
CSNK1D-220ENST00000581737 CFAP100Q494V2 611 aa16.3■□□□□ 0.2
CSNK1D-220ENST00000581737 HHIPL2Q6UWX4 724 aa16.3■□□□□ 0.2
CSNK1D-220ENST00000581737 TBC1D9Q6ZT07 1266 aa16.3■□□□□ 0.2
CSNK1D-220ENST00000581737 MYO5AQ9Y4I1 1855 aaKnown RBP16.3■□□□□ 0.2
CSNK1D-220ENST00000581737 POTEFA5A3E0 1075 aa16.29■□□□□ 0.2
CSNK1D-220ENST00000581737 SPDYE2BA6NHP3 402 aa16.29■□□□□ 0.2
CSNK1D-220ENST00000581737 IDH1O75874 414 aaKnown RBP16.29■□□□□ 0.2
CSNK1D-220ENST00000581737 SPDYE6P0CI01 402 aa16.29■□□□□ 0.2
CSNK1D-220ENST00000581737 MECOMQ03112 1051 aa16.29■□□□□ 0.2
CSNK1D-220ENST00000581737 NOM1Q5C9Z4 860 aaKnown RBP16.29■□□□□ 0.2
CSNK1D-220ENST00000581737 TSHZ3Q63HK5 1081 aa16.29■□□□□ 0.2
CSNK1D-220ENST00000581737 PI4K2BQ8TCG2 481 aa16.29■□□□□ 0.2
CSNK1D-220ENST00000581737 ZDHHC15Q96MV8 337 aa16.29■□□□□ 0.2
CSNK1D-220ENST00000581737 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.29■□□□□ 0.2
CSNK1D-220ENST00000581737 PIH1D3Q9NQM4 214 aaKnown RBP16.29■□□□□ 0.2
CSNK1D-220ENST00000581737 LRRFIP1Q32MZ4 808 aaKnown RBP16.28■□□□□ 0.2
CSNK1D-220ENST00000581737 NAA16Q6N069 864 aaPredicted RBP16.28■□□□□ 0.2
CSNK1D-220ENST00000581737 NSUN4Q96CB9 384 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms