RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 NACAP1Q9BZK3 213 aa14.1□□□□□ -0.15
SNORD3C-201ENST00000580533 SCN4AP35499 1836 aa14.1□□□□□ -0.15
SNORD3C-201ENST00000580533 REC8O95072 547 aa14.09□□□□□ -0.15
SNORD3C-201ENST00000580533 EPHX2P34913 555 aa14.09□□□□□ -0.15
SNORD3C-201ENST00000580533 TNNI2P48788 182 aa14.09□□□□□ -0.15
SNORD3C-201ENST00000580533 NMIQ13287 307 aaPredicted RBP14.09□□□□□ -0.15
SNORD3C-201ENST00000580533 GRIK5Q16478 980 aa14.09□□□□□ -0.15
SNORD3C-201ENST00000580533 USP40Q9NVE5 1235 aa14.09□□□□□ -0.15
SNORD3C-201ENST00000580533 AATFQ9NY61 560 aaKnown RBP eCLIP14.09□□□□□ -0.159e-43■■■■■ 67.1
SNORD3C-201ENST00000580533 CCDC171Q6TFL3 1326 aa14.09□□□□□ -0.15
SNORD3C-201ENST00000580533 GPAA1O43292 621 aa14.08□□□□□ -0.16
SNORD3C-201ENST00000580533 MBD4O95243 580 aa14.08□□□□□ -0.16
SNORD3C-201ENST00000580533 USP5P45974 858 aa14.08□□□□□ -0.16
SNORD3C-201ENST00000580533 TBC1D10BQ4KMP7 808 aaPredicted RBP14.08□□□□□ -0.16
SNORD3C-201ENST00000580533 FKBP1CQ5VVH2 108 aa14.08□□□□□ -0.16
SNORD3C-201ENST00000580533 APOBEC3FQ8IUX4 373 aaKnown RBP14.08□□□□□ -0.16
SNORD3C-201ENST00000580533 TEX11Q8IYF3 940 aa14.08□□□□□ -0.16
SNORD3C-201ENST00000580533 MIGA1Q8NAN2 632 aa14.08□□□□□ -0.16
SNORD3C-201ENST00000580533 ZC3H15Q8WU90 426 aaKnown RBP14.08□□□□□ -0.16
SNORD3C-201ENST00000580533 MYH2Q9UKX2 1941 aa14.07□□□□□ -0.16
SNORD3C-201ENST00000580533 WNT10BO00744 389 aa14.07□□□□□ -0.16
SNORD3C-201ENST00000580533 NPM3O75607 178 aaKnown RBP14.07□□□□□ -0.16
SNORD3C-201ENST00000580533 EPS15P42566 896 aa14.07□□□□□ -0.16
SNORD3C-201ENST00000580533 RBM26Q5T8P6 1007 aaKnown RBP14.07□□□□□ -0.16
SNORD3C-201ENST00000580533 APOBEC3HQ6NTF7 200 aaKnown RBP14.07□□□□□ -0.16
SNORD3C-201ENST00000580533 GIMAP6Q6P9H5 292 aa14.07□□□□□ -0.16
SNORD3C-201ENST00000580533 OSBP2Q969R2 916 aa14.07□□□□□ -0.16
SNORD3C-201ENST00000580533 FAM227BQ96M60 508 aa14.07□□□□□ -0.16
SNORD3C-201ENST00000580533 PUS7LQ9H0K6 701 aaKnown RBP14.07□□□□□ -0.16
SNORD3C-201ENST00000580533 GPBP1L1Q9HC44 474 aaPredicted RBP14.07□□□□□ -0.16
SNORD3C-201ENST00000580533 ATP8A2Q9NTI2 1148 aa14.07□□□□□ -0.16
SNORD3C-201ENST00000580533 PITPNM2Q9BZ72 1349 aa14.07□□□□□ -0.16
SNORD3C-201ENST00000580533 UTRNP46939 3433 aa14.06□□□□□ -0.16
SNORD3C-201ENST00000580533 A0A0D9SFI3 127 aa14.06□□□□□ -0.16
SNORD3C-201ENST00000580533 SGSM2O43147 1006 aa14.06□□□□□ -0.16
SNORD3C-201ENST00000580533 EPB41L2O43491 1005 aaKnown RBP14.06□□□□□ -0.16
SNORD3C-201ENST00000580533 APPP05067 770 aa14.06□□□□□ -0.16
SNORD3C-201ENST00000580533 SPDYE2Q495Y8 402 aa14.06□□□□□ -0.16
SNORD3C-201ENST00000580533 SAMD7Q7Z3H4 446 aa14.06□□□□□ -0.16
SNORD3C-201ENST00000580533 ADGRA1Q86SQ6 560 aa14.06□□□□□ -0.16
SNORD3C-201ENST00000580533 ZNF384Q8TF68 577 aa14.06□□□□□ -0.16
SNORD3C-201ENST00000580533 DCPSQ96C86 337 aaKnown RBP14.06□□□□□ -0.16
SNORD3C-201ENST00000580533 HOOK2Q96ED9 719 aa14.06□□□□□ -0.16
SNORD3C-201ENST00000580533 ZBED3Q96IU2 234 aaPredicted RBP14.06□□□□□ -0.16
SNORD3C-201ENST00000580533 STRBPQ96SI9 672 aaKnown RBP14.06□□□□□ -0.16
SNORD3C-201ENST00000580533 RIOK1Q9BRS2 568 aaKnown RBP14.06□□□□□ -0.16
SNORD3C-201ENST00000580533 ESYT1Q9BSJ8 1104 aa14.06□□□□□ -0.16
SNORD3C-201ENST00000580533 TAF1DQ9H5J8 278 aaPredicted RBP14.06□□□□□ -0.16
SNORD3C-201ENST00000580533 UPF2Q9HAU5 1272 aaKnown RBP14.06□□□□□ -0.16
SNORD3C-201ENST00000580533 CTNNA3Q9UI47 895 aa14.06□□□□□ -0.16
SNORD3C-201ENST00000580533 PPP2R3BQ9Y5P8 575 aa14.06□□□□□ -0.16
SNORD3C-201ENST00000580533 SLC4A4Q9Y6R1 1079 aa14.06□□□□□ -0.16
SNORD3C-201ENST00000580533 PATL2C9JE40 543 aaKnown RBP14.05□□□□□ -0.16
SNORD3C-201ENST00000580533 M0R2C6 588 aa14.05□□□□□ -0.16
SNORD3C-201ENST00000580533 EAPPQ56P03 285 aaPredicted RBP14.05□□□□□ -0.16
SNORD3C-201ENST00000580533 CDC42EP5Q6NZY7 148 aa14.05□□□□□ -0.16
SNORD3C-201ENST00000580533 LCORLQ8N3X6 602 aa14.05□□□□□ -0.16
SNORD3C-201ENST00000580533 PRMT6Q96LA8 375 aaPredicted RBP14.05□□□□□ -0.16
SNORD3C-201ENST00000580533 IDI2Q9BXS1 227 aa14.05□□□□□ -0.16
SNORD3C-201ENST00000580533 ARMT1Q9H993 441 aa14.05□□□□□ -0.16
SNORD3C-201ENST00000580533 VEZTQ9HBM0 779 aa14.05□□□□□ -0.16
SNORD3C-201ENST00000580533 ZNF70Q9UC06 446 aaPredicted RBP14.05□□□□□ -0.16
SNORD3C-201ENST00000580533 TAOK2Q9UL54 1235 aa14.05□□□□□ -0.16
SNORD3C-201ENST00000580533 MYO5AQ9Y4I1 1855 aaKnown RBP14.04□□□□□ -0.16
SNORD3C-201ENST00000580533 ENTPD3O75355 529 aa14.04□□□□□ -0.16
SNORD3C-201ENST00000580533 HLA-DOAP06340 250 aa14.04□□□□□ -0.16
SNORD3C-201ENST00000580533 YY1P25490 414 aa14.04□□□□□ -0.16
SNORD3C-201ENST00000580533 TDO2P48775 406 aa14.04□□□□□ -0.16
SNORD3C-201ENST00000580533 FAM83AQ86UY5 434 aa14.04□□□□□ -0.16
SNORD3C-201ENST00000580533 SULF1Q8IWU6 871 aa14.04□□□□□ -0.16
SNORD3C-201ENST00000580533 TRPM4Q8TD43 1214 aa14.04□□□□□ -0.16
SNORD3C-201ENST00000580533 SH3RF3Q8TEJ3 882 aaPredicted RBP14.04□□□□□ -0.16
SNORD3C-201ENST00000580533 DSCC1Q9BVC3 393 aa14.04□□□□□ -0.16
SNORD3C-201ENST00000580533 DHX36Q9H2U1 1008 aaKnown RBP14.04□□□□□ -0.16
SNORD3C-201ENST00000580533 TDRD3Q9H7E2 651 aaKnown RBP14.04□□□□□ -0.16
SNORD3C-201ENST00000580533 RRAGCQ9HB90 399 aa14.04□□□□□ -0.16
SNORD3C-201ENST00000580533 ANO2Q9NQ90 1003 aa14.04□□□□□ -0.16
SNORD3C-201ENST00000580533 ARPP21Q9UBL0 812 aaPredicted RBP14.04□□□□□ -0.16
SNORD3C-201ENST00000580533 ZMYM6O95789 1325 aa14.04□□□□□ -0.16
SNORD3C-201ENST00000580533 SLC3A2P08195 630 aaKnown RBP14.03□□□□□ -0.16
SNORD3C-201ENST00000580533 MCCP23508 829 aa14.03□□□□□ -0.16
SNORD3C-201ENST00000580533 RHBDL3P58872 404 aa14.03□□□□□ -0.16
SNORD3C-201ENST00000580533 DYNLL1P63167 89 aaKnown RBP14.03□□□□□ -0.16
SNORD3C-201ENST00000580533 NBPF9Q3BBW0 867 aa14.03□□□□□ -0.16
SNORD3C-201ENST00000580533 LDHDQ86WU2 507 aa14.03□□□□□ -0.16
SNORD3C-201ENST00000580533 ZNF526Q8TF50 670 aaPredicted RBP14.03□□□□□ -0.16
SNORD3C-201ENST00000580533 TGFBRAP1Q8WUH2 860 aa14.03□□□□□ -0.16
SNORD3C-201ENST00000580533 SEC62Q99442 399 aaKnown RBP14.03□□□□□ -0.16
SNORD3C-201ENST00000580533 NAPBQ9H115 298 aa14.03□□□□□ -0.16
SNORD3C-201ENST00000580533 GGA3Q9NZ52 723 aa14.03□□□□□ -0.16
SNORD3C-201ENST00000580533 CLEC11AQ9Y240 323 aa14.03□□□□□ -0.16
SNORD3C-201ENST00000580533 U3KPZ7 1027 aaPredicted RBP14.03□□□□□ -0.16
SNORD3C-201ENST00000580533 ECM29Q5VYK3 1845 aa14.02□□□□□ -0.16
SNORD3C-201ENST00000580533 COL2A1P02458 1487 aaPredicted RBP14.02□□□□□ -0.16
SNORD3C-201ENST00000580533 SHTN1A0MZ66 631 aa14.02□□□□□ -0.17
SNORD3C-201ENST00000580533 CLRN2A0PK11 232 aa14.02□□□□□ -0.17
SNORD3C-201ENST00000580533 PICALMQ13492 652 aa14.02□□□□□ -0.17
SNORD3C-201ENST00000580533 ANGEL2Q5VTE6 544 aaKnown RBP14.02□□□□□ -0.17
SNORD3C-201ENST00000580533 RNF20Q5VTR2 975 aa14.02□□□□□ -0.17
SNORD3C-201ENST00000580533 TTC6Q86TZ1 520 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms