RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 RRP1P56182 461 aaKnown RBP13.35□□□□□ -0.27
NDEL1-208ENST00000580237 MKRN3Q13064 507 aaKnown RBP13.35□□□□□ -0.27
NDEL1-208ENST00000580237 APOBEC3HQ6NTF7 200 aaKnown RBP13.35□□□□□ -0.27
NDEL1-208ENST00000580237 HOOK2Q96ED9 719 aa13.35□□□□□ -0.27
NDEL1-208ENST00000580237 KIF1BPQ96EK5 621 aa13.35□□□□□ -0.27
NDEL1-208ENST00000580237 CCDC8Q9H0W5 538 aaPredicted RBP13.35□□□□□ -0.27
NDEL1-208ENST00000580237 IL1RAPL2Q9NP60 686 aa13.35□□□□□ -0.27
NDEL1-208ENST00000580237 SNRKQ9NRH2 765 aa13.35□□□□□ -0.27
NDEL1-208ENST00000580237 TLR7Q9NYK1 1049 aaKnown RBP13.35□□□□□ -0.27
NDEL1-208ENST00000580237 LRP2BPQ9P2M1 347 aa13.35□□□□□ -0.27
NDEL1-208ENST00000580237 DBNLQ9UJU6 430 aaKnown RBP13.35□□□□□ -0.27
NDEL1-208ENST00000580237 CDK5RAP2Q96SN8 1893 aa13.35□□□□□ -0.27
NDEL1-208ENST00000580237 LAMB1P07942 1786 aa13.35□□□□□ -0.27
NDEL1-208ENST00000580237 CASP8AP2Q9UKL3 1982 aa13.34□□□□□ -0.27
NDEL1-208ENST00000580237 CA12O43570 354 aa13.34□□□□□ -0.27
NDEL1-208ENST00000580237 GSTO1P78417 241 aa13.34□□□□□ -0.27
NDEL1-208ENST00000580237 KIF23Q02241 960 aaPredicted RBP13.34□□□□□ -0.27
NDEL1-208ENST00000580237 FKBP1CQ5VVH2 108 aa13.34□□□□□ -0.27
NDEL1-208ENST00000580237 CDC42EP5Q6NZY7 148 aa13.34□□□□□ -0.27
NDEL1-208ENST00000580237 FAM83AQ86UY5 434 aa13.34□□□□□ -0.27
NDEL1-208ENST00000580237 CLASRPQ8N2M8 674 aaKnown RBP13.34□□□□□ -0.27
NDEL1-208ENST00000580237 RHPN1Q8TCX5 695 aa13.34□□□□□ -0.27
NDEL1-208ENST00000580237 NOL10Q9BSC4 688 aaKnown RBP13.34□□□□□ -0.27
NDEL1-208ENST00000580237 USP40Q9NVE5 1235 aa13.34□□□□□ -0.27
NDEL1-208ENST00000580237 MROH7-TTC4A0A0A0MT08 1334 aa13.34□□□□□ -0.27
NDEL1-208ENST00000580237 MYH7P12883 1935 aa13.33□□□□□ -0.28
NDEL1-208ENST00000580237 BTDP43251 543 aa13.33□□□□□ -0.28
NDEL1-208ENST00000580237 LBX1P52954 281 aa13.33□□□□□ -0.28
NDEL1-208ENST00000580237 MECOMQ03112 1051 aa13.33□□□□□ -0.28
NDEL1-208ENST00000580237 TCP10Q12799 353 aa13.33□□□□□ -0.28
NDEL1-208ENST00000580237 TBC1D9Q6ZT07 1266 aa13.33□□□□□ -0.28
NDEL1-208ENST00000580237 CDAN1Q8IWY9 1227 aa13.33□□□□□ -0.28
NDEL1-208ENST00000580237 EAF2Q96CJ1 260 aaPredicted RBP13.33□□□□□ -0.28
NDEL1-208ENST00000580237 ZIC5Q96T25 663 aa13.33□□□□□ -0.28
NDEL1-208ENST00000580237 TSKSQ9UJT2 592 aa13.33□□□□□ -0.28
NDEL1-208ENST00000580237 FOCADQ5VW36 1801 aa13.33□□□□□ -0.28
NDEL1-208ENST00000580237 GAKO14976 1311 aa13.33□□□□□ -0.28
NDEL1-208ENST00000580237 PCNTO95613 3336 aa13.32□□□□□ -0.28
NDEL1-208ENST00000580237 RAB11FIP3O75154 756 aa13.32□□□□□ -0.28
NDEL1-208ENST00000580237 LDHCP07864 332 aa13.32□□□□□ -0.28
NDEL1-208ENST00000580237 IFIT2P09913 472 aaKnown RBP13.32□□□□□ -0.28
NDEL1-208ENST00000580237 HSPA8P11142 646 aaKnown RBP13.32□□□□□ -0.28
NDEL1-208ENST00000580237 DCAF15Q66K64 600 aa13.32□□□□□ -0.28
NDEL1-208ENST00000580237 SIRT2Q8IXJ6 389 aa13.32□□□□□ -0.28
NDEL1-208ENST00000580237 ANKRD13AQ8IZ07 590 aa13.32□□□□□ -0.28
NDEL1-208ENST00000580237 SLC10A4Q96EP9 437 aa13.32□□□□□ -0.28
NDEL1-208ENST00000580237 TEPSINQ96N21 525 aa13.32□□□□□ -0.28
NDEL1-208ENST00000580237 CSADQ9Y600 493 aa13.32□□□□□ -0.28
NDEL1-208ENST00000580237 SREBF2Q12772 1141 aa13.31□□□□□ -0.28
NDEL1-208ENST00000580237 MAP3K11Q16584 847 aa13.31□□□□□ -0.28
NDEL1-208ENST00000580237 LDLRAD1Q5T700 205 aa13.31□□□□□ -0.28
NDEL1-208ENST00000580237 COL13A1Q5TAT6 717 aaPredicted RBP13.31□□□□□ -0.28
NDEL1-208ENST00000580237 NAA16Q6N069 864 aaPredicted RBP13.31□□□□□ -0.28
NDEL1-208ENST00000580237 ZSCAN29Q8IWY8 852 aaPredicted RBP13.31□□□□□ -0.28
NDEL1-208ENST00000580237 REM2Q8IYK8 340 aaPredicted RBP13.31□□□□□ -0.28
NDEL1-208ENST00000580237 CLMNQ96JQ2 1002 aa13.31□□□□□ -0.28
NDEL1-208ENST00000580237 ZNF512BQ96KM6 892 aaPredicted RBP13.31□□□□□ -0.28
NDEL1-208ENST00000580237 PRDM10Q9NQV6 1147 aa13.31□□□□□ -0.28
NDEL1-208ENST00000580237 DOCK1Q14185 1865 aa13.3□□□□□ -0.28
NDEL1-208ENST00000580237 USP2O75604 605 aaPredicted RBP13.3□□□□□ -0.28
NDEL1-208ENST00000580237 IDH1O75874 414 aaKnown RBP13.3□□□□□ -0.28
NDEL1-208ENST00000580237 ZAP70P43403 619 aa13.3□□□□□ -0.28
NDEL1-208ENST00000580237 RGS3P49796 1198 aa13.3□□□□□ -0.28
NDEL1-208ENST00000580237 NFIAQ12857 509 aa13.3□□□□□ -0.28
NDEL1-208ENST00000580237 PICALMQ13492 652 aa13.3□□□□□ -0.28
NDEL1-208ENST00000580237 TNS4Q8IZW8 715 aa13.3□□□□□ -0.28
NDEL1-208ENST00000580237 FAM151AQ8WW52 585 aa13.3□□□□□ -0.28
NDEL1-208ENST00000580237 NSUN4Q96CB9 384 aaKnown RBP13.3□□□□□ -0.28
NDEL1-208ENST00000580237 WRNIP1Q96S55 665 aa13.3□□□□□ -0.28
NDEL1-208ENST00000580237 ELP3Q9H9T3 547 aa13.3□□□□□ -0.28
NDEL1-208ENST00000580237 ATAD5Q96QE3 1844 aa13.29□□□□□ -0.28
NDEL1-208ENST00000580237 MYH1P12882 1939 aa13.29□□□□□ -0.28
NDEL1-208ENST00000580237 UNCXA6NJT0 531 aa13.29□□□□□ -0.28
NDEL1-208ENST00000580237 ZBTB48P10074 688 aaPredicted RBP13.29□□□□□ -0.28
NDEL1-208ENST00000580237 SPRYD7Q5W111 196 aa13.29□□□□□ -0.28
NDEL1-208ENST00000580237 WNK4Q96J92 1243 aa13.29□□□□□ -0.28
NDEL1-208ENST00000580237 CSRNP1Q96S65 589 aa13.29□□□□□ -0.28
NDEL1-208ENST00000580237 ZNF341Q9BYN7 854 aa13.29□□□□□ -0.28
NDEL1-208ENST00000580237 LRRCC1Q9C099 1032 aa13.29□□□□□ -0.28
NDEL1-208ENST00000580237 SAGE1Q9NXZ1 904 aa13.29□□□□□ -0.28
NDEL1-208ENST00000580237 RFX7Q2KHR2 1363 aa13.29□□□□□ -0.28
NDEL1-208ENST00000580237 NAV1Q8NEY1 1877 aa13.29□□□□□ -0.28
NDEL1-208ENST00000580237 GPR75-ASB3A0A0A6YYF3 556 aa13.28□□□□□ -0.28
NDEL1-208ENST00000580237 MANSC4A6NHS7 340 aaPredicted RBP13.28□□□□□ -0.28
NDEL1-208ENST00000580237 ENTPD3O75355 529 aa13.28□□□□□ -0.28
NDEL1-208ENST00000580237 TRPA1O75762 1119 aa13.28□□□□□ -0.28
NDEL1-208ENST00000580237 BAG3O95817 575 aa13.28□□□□□ -0.28
NDEL1-208ENST00000580237 CYP2E1P05181 493 aaPredicted RBP13.28□□□□□ -0.28
NDEL1-208ENST00000580237 MAP3K9P80192 1104 aa13.28□□□□□ -0.28
NDEL1-208ENST00000580237 VGLL4Q14135 290 aa13.28□□□□□ -0.28
NDEL1-208ENST00000580237 MIGA2Q7L4E1 593 aa13.28□□□□□ -0.28
NDEL1-208ENST00000580237 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.28□□□□□ -0.28
NDEL1-208ENST00000580237 FAM163AQ96GL9 167 aaPredicted RBP13.28□□□□□ -0.28
NDEL1-208ENST00000580237 DNAJC2Q99543 621 aaKnown RBP13.28□□□□□ -0.28
NDEL1-208ENST00000580237 PIH1D3Q9NQM4 214 aaKnown RBP13.28□□□□□ -0.28
NDEL1-208ENST00000580237 FAM198AQ9UFP1 575 aa13.28□□□□□ -0.28
NDEL1-208ENST00000580237 PLCG2P16885 1265 aa13.27□□□□□ -0.29
NDEL1-208ENST00000580237 MAP3K12Q12852 859 aa13.27□□□□□ -0.29
NDEL1-208ENST00000580237 TEX11Q8IYF3 940 aa13.27□□□□□ -0.29
NDEL1-208ENST00000580237 ZNF384Q8TF68 577 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms