RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 FAM151AQ8WW52 585 aa22.33■■□□□ 1.17
MKS1-209ENST00000580127 ZKSCAN4Q969J2 545 aaPredicted RBP22.33■■□□□ 1.17
MKS1-209ENST00000580127 SNCAIPQ9Y6H5 919 aa22.33■■□□□ 1.17
MKS1-209ENST00000580127 AK9Q5TCS8 1911 aa22.31■■□□□ 1.16
MKS1-209ENST00000580127 IRF6O14896 467 aa22.31■■□□□ 1.16
MKS1-209ENST00000580127 UBTFL1P0CB47 393 aaPredicted RBP22.31■■□□□ 1.16
MKS1-209ENST00000580127 BTBD19C9JJ37 291 aa22.3■■□□□ 1.16
MKS1-209ENST00000580127 LDHBP07195 334 aaKnown RBP22.3■■□□□ 1.16
MKS1-209ENST00000580127 EN2P19622 333 aaPredicted RBP22.3■■□□□ 1.16
MKS1-209ENST00000580127 HOXD10P28358 340 aa22.3■■□□□ 1.16
MKS1-209ENST00000580127 SLFN5Q08AF3 891 aa22.3■■□□□ 1.16
MKS1-209ENST00000580127 MIGA2Q7L4E1 593 aa22.3■■□□□ 1.16
MKS1-209ENST00000580127 ZNF333Q96JL9 665 aa22.3■■□□□ 1.16
MKS1-209ENST00000580127 SMC4Q9NTJ3 1288 aa22.3■■□□□ 1.16
MKS1-209ENST00000580127 RPAP1Q9BWH6 1393 aaPredicted RBP22.29■■□□□ 1.16
MKS1-209ENST00000580127 SEMA3EO15041 775 aa22.29■■□□□ 1.16
MKS1-209ENST00000580127 CIAO1O76071 339 aa22.29■■□□□ 1.16
MKS1-209ENST00000580127 LACTBP83111 547 aaPredicted RBP22.29■■□□□ 1.16
MKS1-209ENST00000580127 ATP2B3Q16720 1220 aa22.29■■□□□ 1.16
MKS1-209ENST00000580127 DENND2AQ9ULE3 1009 aa22.29■■□□□ 1.16
MKS1-209ENST00000580127 PTCH2Q9Y6C5 1203 aa22.29■■□□□ 1.16
MKS1-209ENST00000580127 ZGPATQ8N5A5 531 aaKnown RBP22.28■■□□□ 1.16
MKS1-209ENST00000580127 CT47B1P0C2W7 299 aaPredicted RBP22.27■■□□□ 1.16
MKS1-209ENST00000580127 RFX5P48382 616 aaPredicted RBP22.27■■□□□ 1.16
MKS1-209ENST00000580127 TCP10Q12799 353 aa22.27■■□□□ 1.16
MKS1-209ENST00000580127 CDC42EP5Q6NZY7 148 aa22.27■■□□□ 1.16
MKS1-209ENST00000580127 ANKRD23Q86SG2 305 aa22.27■■□□□ 1.16
MKS1-209ENST00000580127 SLF2Q8IX21 1173 aa22.27■■□□□ 1.16
MKS1-209ENST00000580127 USP40Q9NVE5 1235 aa22.27■■□□□ 1.16
MKS1-209ENST00000580127 RBBP6Q7Z6E9 1792 aaKnown RBP22.27■■□□□ 1.16
MKS1-209ENST00000580127 MYH13Q9UKX3 1938 aa22.26■■□□□ 1.15
MKS1-209ENST00000580127 IL15P40933 162 aaPredicted RBP22.26■■□□□ 1.15
MKS1-209ENST00000580127 ATG9AQ7Z3C6 839 aa22.26■■□□□ 1.15
MKS1-209ENST00000580127 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.26■■□□□ 1.15
MKS1-209ENST00000580127 API5Q9BZZ5 524 aaKnown RBP22.26■■□□□ 1.15
MKS1-209ENST00000580127 SIL1Q9H173 461 aa22.26■■□□□ 1.15
MKS1-209ENST00000580127 ZNF112Q9UJU3 913 aa22.26■■□□□ 1.15
MKS1-209ENST00000580127 DAGLAQ9Y4D2 1042 aa22.26■■□□□ 1.15
MKS1-209ENST00000580127 PDHXO00330 501 aa22.24■■□□□ 1.15
MKS1-209ENST00000580127 INPP5BP32019 993 aa22.24■■□□□ 1.15
MKS1-209ENST00000580127 SPTY2D1Q68D10 685 aaPredicted RBP22.24■■□□□ 1.15
MKS1-209ENST00000580127 SALL1Q9NSC2 1324 aa22.24■■□□□ 1.15
MKS1-209ENST00000580127 CXCL11O14625 94 aa22.23■■□□□ 1.15
MKS1-209ENST00000580127 FMNL1O95466 1100 aaPredicted RBP22.23■■□□□ 1.15
MKS1-209ENST00000580127 DIXDC1Q155Q3 683 aa22.23■■□□□ 1.15
MKS1-209ENST00000580127 HABP4Q5JVS0 413 aaKnown RBP22.23■■□□□ 1.15
MKS1-209ENST00000580127 C17orf99Q6UX52 265 aa22.23■■□□□ 1.15
MKS1-209ENST00000580127 KCNH4Q9UQ05 1017 aa22.23■■□□□ 1.15
MKS1-209ENST00000580127 PRDX5P30044 214 aa22.22■■□□□ 1.15
MKS1-209ENST00000580127 PSMC4P43686 418 aa22.22■■□□□ 1.15
MKS1-209ENST00000580127 CAP1Q01518 475 aa22.22■■□□□ 1.15
MKS1-209ENST00000580127 NOL9Q5SY16 702 aaKnown RBP22.22■■□□□ 1.15
MKS1-209ENST00000580127 FASTKD5Q7L8L6 764 aaKnown RBP22.22■■□□□ 1.15
MKS1-209ENST00000580127 PICK1Q9NRD5 415 aa22.22■■□□□ 1.15
MKS1-209ENST00000580127 AKAP2Q9Y2D5 859 aa22.22■■□□□ 1.15
MKS1-209ENST00000580127 ENTPD3O75355 529 aa22.21■■□□□ 1.15
MKS1-209ENST00000580127 MYCP01106 439 aaPredicted RBP22.21■■□□□ 1.15
MKS1-209ENST00000580127 ZSCAN29Q8IWY8 852 aaPredicted RBP22.21■■□□□ 1.15
MKS1-209ENST00000580127 NKX2-3Q8TAU0 364 aa22.21■■□□□ 1.15
MKS1-209ENST00000580127 RAET1EQ8TD07 263 aa22.21■■□□□ 1.15
MKS1-209ENST00000580127 PARK7Q99497 189 aaKnown RBP22.21■■□□□ 1.15
MKS1-209ENST00000580127 ARHGAP39Q9C0H5 1083 aa22.21■■□□□ 1.15
MKS1-209ENST00000580127 CPA4Q9UI42 421 aa22.21■■□□□ 1.15
MKS1-209ENST00000580127 NOB1Q9ULX3 412 aaKnown RBP22.21■■□□□ 1.15
MKS1-209ENST00000580127 ZBTB22O15209 634 aa22.2■■□□□ 1.14
MKS1-209ENST00000580127 DZIP1Q86YF9 867 aaKnown RBP22.2■■□□□ 1.14
MKS1-209ENST00000580127 SH3TC2Q8TF17 1288 aa22.2■■□□□ 1.14
MKS1-209ENST00000580127 TRIM47Q96LD4 638 aa22.2■■□□□ 1.14
MKS1-209ENST00000580127 SRRDQ9UH36 339 aa22.2■■□□□ 1.14
MKS1-209ENST00000580127 LRRFIP2Q9Y608 721 aaKnown RBP22.2■■□□□ 1.14
MKS1-209ENST00000580127 NFIAQ12857 509 aa22.19■■□□□ 1.14
MKS1-209ENST00000580127 IDI2Q9BXS1 227 aa22.19■■□□□ 1.14
MKS1-209ENST00000580127 COPRSQ9NQ92 184 aa22.19■■□□□ 1.14
MKS1-209ENST00000580127 BIN2Q9UBW5 565 aaPredicted RBP22.19■■□□□ 1.14
MKS1-209ENST00000580127 FAM198AQ9UFP1 575 aa22.19■■□□□ 1.14
MKS1-209ENST00000580127 GNAI3P08754 354 aa22.18■■□□□ 1.14
MKS1-209ENST00000580127 PHKA1P46020 1223 aa22.18■■□□□ 1.14
MKS1-209ENST00000580127 CCDC102BQ68D86 513 aa22.18■■□□□ 1.14
MKS1-209ENST00000580127 CDCA7LQ96GN5 454 aa22.18■■□□□ 1.14
MKS1-209ENST00000580127 ABCF2Q9UG63 623 aa22.18■■□□□ 1.14
MKS1-209ENST00000580127 ZHX2Q9Y6X8 837 aa22.18■■□□□ 1.14
MKS1-209ENST00000580127 GRK4P32298 578 aa22.17■■□□□ 1.14
MKS1-209ENST00000580127 RGS3P49796 1198 aa22.17■■□□□ 1.14
MKS1-209ENST00000580127 FCGRTP55899 365 aa22.17■■□□□ 1.14
MKS1-209ENST00000580127 UBXN2AP68543 259 aa22.17■■□□□ 1.14
MKS1-209ENST00000580127 SCYL3Q8IZE3 742 aa22.17■■□□□ 1.14
MKS1-209ENST00000580127 PDS5AQ29RF7 1337 aaKnown RBP22.16■■□□□ 1.14
MKS1-209ENST00000580127 MVPQ14764 893 aaKnown RBP22.16■■□□□ 1.14
MKS1-209ENST00000580127 TRMT2AQ8IZ69 625 aaKnown RBP22.16■■□□□ 1.14
MKS1-209ENST00000580127 FAM163AQ96GL9 167 aaPredicted RBP22.16■■□□□ 1.14
MKS1-209ENST00000580127 CTNND1O60716 968 aaKnown RBP22.15■■□□□ 1.14
MKS1-209ENST00000580127 ECM2O94769 699 aaPredicted RBP22.15■■□□□ 1.14
MKS1-209ENST00000580127 LDHCP07864 332 aa22.15■■□□□ 1.14
MKS1-209ENST00000580127 OSBPP22059 807 aa22.15■■□□□ 1.14
MKS1-209ENST00000580127 TIMM10P62072 90 aa22.15■■□□□ 1.14
MKS1-209ENST00000580127 GORABQ5T7V8 394 aa22.15■■□□□ 1.14
MKS1-209ENST00000580127 ARHGAP45Q92619 1136 aa22.15■■□□□ 1.14
MKS1-209ENST00000580127 MYH2Q9UKX2 1941 aa22.15■■□□□ 1.14
MKS1-209ENST00000580127 HTTP42858 3142 aa22.15■■□□□ 1.14
MKS1-209ENST00000580127 MYPNQ86TC9 1320 aa22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms