RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-208	ENST00000579466	DCAF15	Q66K64	600 aa		12.07	□□□□□ -0.48
MSI2-208	ENST00000579466	ZNF341	Q9BYN7	854 aa		12.07	□□□□□ -0.48
MSI2-208	ENST00000579466	COLQ	Q9Y215	455 aa	Predicted RBP	12.07	□□□□□ -0.48
MSI2-208	ENST00000579466	UTY	O14607	1347 aa		12.07	□□□□□ -0.48
MSI2-208	ENST00000579466	MGAM	O43451	1857 aa		12.06	□□□□□ -0.48
MSI2-208	ENST00000579466	CTGF	P29279	349 aa		12.06	□□□□□ -0.48
MSI2-208	ENST00000579466	FXR1	P51114	621 aa	Known RBP eCLIP	12.06	□□□□□ -0.48
MSI2-208	ENST00000579466	MTFR1	Q15390	333 aa		12.06	□□□□□ -0.48
MSI2-208	ENST00000579466	FAM83A	Q86UY5	434 aa		12.06	□□□□□ -0.48
MSI2-208	ENST00000579466	MRPL50	Q8N5N7	158 aa	Known RBP	12.06	□□□□□ -0.48
MSI2-208	ENST00000579466	SIL1	Q9H173	461 aa		12.06	□□□□□ -0.48
MSI2-208	ENST00000579466	RPAP1	Q9BWH6	1393 aa	Predicted RBP	12.05	□□□□□ -0.48
MSI2-208	ENST00000579466		H0YGN5	161 aa		12.05	□□□□□ -0.48
MSI2-208	ENST00000579466	PDHX	O00330	501 aa		12.05	□□□□□ -0.48
MSI2-208	ENST00000579466	FMNL1	O95466	1100 aa	Predicted RBP	12.05	□□□□□ -0.48
MSI2-208	ENST00000579466	SLC5A1	P13866	664 aa		12.05	□□□□□ -0.48
MSI2-208	ENST00000579466	PSMC4	P43686	418 aa		12.05	□□□□□ -0.48
MSI2-208	ENST00000579466	NFIA	Q12857	509 aa		12.05	□□□□□ -0.48
MSI2-208	ENST00000579466	HOOK2	Q96ED9	719 aa		12.05	□□□□□ -0.48
MSI2-208	ENST00000579466	DAGLA	Q9Y4D2	1042 aa		12.05	□□□□□ -0.48
MSI2-208	ENST00000579466	MYH2	Q9UKX2	1941 aa		12.05	□□□□□ -0.48
MSI2-208	ENST00000579466	EYA2	O00167	538 aa		12.04	□□□□□ -0.48
MSI2-208	ENST00000579466	FGFR2	P21802	821 aa		12.04	□□□□□ -0.48
MSI2-208	ENST00000579466	PRDX5	P30044	214 aa		12.04	□□□□□ -0.48
MSI2-208	ENST00000579466	PPAT	Q06203	517 aa		12.04	□□□□□ -0.48
MSI2-208	ENST00000579466	CDC42EP5	Q6NZY7	148 aa		12.04	□□□□□ -0.48
MSI2-208	ENST00000579466	HHIPL2	Q6UWX4	724 aa		12.04	□□□□□ -0.48
MSI2-208	ENST00000579466	RAET1E	Q8TD07	263 aa		12.04	□□□□□ -0.48
MSI2-208	ENST00000579466	TRIM47	Q96LD4	638 aa		12.04	□□□□□ -0.48
MSI2-208	ENST00000579466	MYPN	Q86TC9	1320 aa		12.04	□□□□□ -0.48
MSI2-208	ENST00000579466	CYP2C8	P10632	490 aa		12.03	□□□□□ -0.48
MSI2-208	ENST00000579466	OSBP	P22059	807 aa		12.03	□□□□□ -0.48
MSI2-208	ENST00000579466	FKBP1C	Q5VVH2	108 aa		12.03	□□□□□ -0.48
MSI2-208	ENST00000579466	C17orf99	Q6UX52	265 aa		12.03	□□□□□ -0.48
MSI2-208	ENST00000579466	CHRDL2	Q6WN34	429 aa		12.03	□□□□□ -0.48
MSI2-208	ENST00000579466	WDR66	Q8TBY9	1149 aa		12.03	□□□□□ -0.48
MSI2-208	ENST00000579466	FAM151A	Q8WW52	585 aa		12.03	□□□□□ -0.48
MSI2-208	ENST00000579466	DPF3	Q92784	378 aa		12.03	□□□□□ -0.48
MSI2-208	ENST00000579466	SHISA4	Q96DD7	197 aa		12.03	□□□□□ -0.48
MSI2-208	ENST00000579466	USP44	Q9H0E7	712 aa		12.03	□□□□□ -0.48
MSI2-208	ENST00000579466	ZCCHC17	Q9NP64	241 aa	Known RBP	12.03	□□□□□ -0.48
MSI2-208	ENST00000579466	BIN2	Q9UBW5	565 aa	Predicted RBP	12.03	□□□□□ -0.48
MSI2-208	ENST00000579466	DOCK1	Q14185	1865 aa		12.02	□□□□□ -0.48
MSI2-208	ENST00000579466	PTPRF	P10586	1907 aa		12.02	□□□□□ -0.49
MSI2-208	ENST00000579466	GRK4	P32298	578 aa		12.02	□□□□□ -0.49
MSI2-208	ENST00000579466	RFX5	P48382	616 aa	Predicted RBP	12.02	□□□□□ -0.49
MSI2-208	ENST00000579466	ANKRD23	Q86SG2	305 aa		12.02	□□□□□ -0.49
MSI2-208	ENST00000579466	SSH1	Q8WYL5	1049 aa		12.02	□□□□□ -0.49
MSI2-208	ENST00000579466	LPIN2	Q92539	896 aa		12.02	□□□□□ -0.49
MSI2-208	ENST00000579466	USP40	Q9NVE5	1235 aa		12.02	□□□□□ -0.49
MSI2-208	ENST00000579466	SRRD	Q9UH36	339 aa		12.02	□□□□□ -0.49
MSI2-208	ENST00000579466	SUGT1	Q9Y2Z0	365 aa		12.02	□□□□□ -0.49
MSI2-208	ENST00000579466	PTPRC	P08575	1304 aa		12.02	□□□□□ -0.49
MSI2-208	ENST00000579466	KIF16B	Q96L93	1317 aa		12.02	□□□□□ -0.49
MSI2-208	ENST00000579466	GNRH1	P01148	92 aa		12.01	□□□□□ -0.49
MSI2-208	ENST00000579466	LDHB	P07195	334 aa	Known RBP	12.01	□□□□□ -0.49
MSI2-208	ENST00000579466	SLURP2	P0DP57	97 aa		12.01	□□□□□ -0.49
MSI2-208	ENST00000579466	PRKCZ	Q05513	592 aa		12.01	□□□□□ -0.49
MSI2-208	ENST00000579466	ATP2B3	Q16720	1220 aa		12.01	□□□□□ -0.49
MSI2-208	ENST00000579466	ATG9A	Q7Z3C6	839 aa		12.01	□□□□□ -0.49
MSI2-208	ENST00000579466	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	12.01	□□□□□ -0.49
MSI2-208	ENST00000579466	ZFPM1	Q8IX07	1006 aa		12.01	□□□□□ -0.49
MSI2-208	ENST00000579466	PARK7	Q99497	189 aa	Known RBP	12.01	□□□□□ -0.49
MSI2-208	ENST00000579466	MRI	Q9BWK5	157 aa		12.01	□□□□□ -0.49
MSI2-208	ENST00000579466	FAM198A	Q9UFP1	575 aa		12.01	□□□□□ -0.49
MSI2-208	ENST00000579466	KCNH4	Q9UQ05	1017 aa		12.01	□□□□□ -0.49
MSI2-208	ENST00000579466	ADGRA2	Q96PE1	1338 aa		12.01	□□□□□ -0.49
MSI2-208	ENST00000579466	CCL5	P13501	91 aa		12	□□□□□ -0.49
MSI2-208	ENST00000579466	HOXD10	P28358	340 aa		12	□□□□□ -0.49
MSI2-208	ENST00000579466	PHKA1	P46020	1223 aa		12	□□□□□ -0.49
MSI2-208	ENST00000579466	RGS3	P49796	1198 aa		12	□□□□□ -0.49
MSI2-208	ENST00000579466	PRMT2	P55345	433 aa		12	□□□□□ -0.49
MSI2-208	ENST00000579466	MOGS	Q13724	837 aa		12	□□□□□ -0.49
MSI2-208	ENST00000579466	GADL1	Q6ZQY3	521 aa		12	□□□□□ -0.49
MSI2-208	ENST00000579466	RNF208	Q9H0X6	261 aa		12	□□□□□ -0.49
MSI2-208	ENST00000579466	SMC4	Q9NTJ3	1288 aa		12	□□□□□ -0.49
MSI2-208	ENST00000579466	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	12	□□□□□ -0.49
MSI2-208	ENST00000579466	TAOK2	Q9UL54	1235 aa		12	□□□□□ -0.49
MSI2-208	ENST00000579466	PA2G4	Q9UQ80	394 aa	Known RBP	12	□□□□□ -0.49
MSI2-208	ENST00000579466	ZNF521	Q96K83	1311 aa		12	□□□□□ -0.49
MSI2-208	ENST00000579466	PHIP	Q8WWQ0	1821 aa		12	□□□□□ -0.49
MSI2-208	ENST00000579466	UBTFL1	P0CB47	393 aa	Predicted RBP	11.99	□□□□□ -0.49
MSI2-208	ENST00000579466	ADORA1	P30542	326 aa		11.99	□□□□□ -0.49
MSI2-208	ENST00000579466	FCGRT	P55899	365 aa		11.99	□□□□□ -0.49
MSI2-208	ENST00000579466	PICALM	Q13492	652 aa		11.99	□□□□□ -0.49
MSI2-208	ENST00000579466	NOL9	Q5SY16	702 aa	Known RBP	11.99	□□□□□ -0.49
MSI2-208	ENST00000579466	CCDC84	Q86UT8	332 aa	Predicted RBP	11.99	□□□□□ -0.49
MSI2-208	ENST00000579466	PICK1	Q9NRD5	415 aa		11.99	□□□□□ -0.49
MSI2-208	ENST00000579466	GNL3L	Q9NVN8	582 aa	Known RBP	11.99	□□□□□ -0.49
MSI2-208	ENST00000579466	CEP126	Q9P2H0	1117 aa		11.99	□□□□□ -0.49
MSI2-208	ENST00000579466	ZNF112	Q9UJU3	913 aa		11.99	□□□□□ -0.49
MSI2-208	ENST00000579466	GABRQ	Q9UN88	632 aa		11.99	□□□□□ -0.49
MSI2-208	ENST00000579466	ZHX2	Q9Y6X8	837 aa		11.99	□□□□□ -0.49
MSI2-208	ENST00000579466	ATAD5	Q96QE3	1844 aa		11.98	□□□□□ -0.49
MSI2-208	ENST00000579466	TRIM75P	A6NK02	468 aa		11.98	□□□□□ -0.49
MSI2-208	ENST00000579466	ELN	P15502	786 aa		11.98	□□□□□ -0.49
MSI2-208	ENST00000579466	UBXN2A	P68543	259 aa		11.98	□□□□□ -0.49
MSI2-208	ENST00000579466	GPAT2	Q6NUI2	795 aa		11.98	□□□□□ -0.49
MSI2-208	ENST00000579466	DZIP1	Q86YF9	867 aa	Known RBP	11.98	□□□□□ -0.49
MSI2-208	ENST00000579466	SCYL3	Q8IZE3	742 aa		11.98	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms