RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 CHD9Q3L8U1 2897 aa9.23□□□□□ -0.93
CDK5RAP3-209ENST00000578663 KRT37O76014 449 aa9.23□□□□□ -0.93
CDK5RAP3-209ENST00000578663 CETPP11597 493 aa9.23□□□□□ -0.93
CDK5RAP3-209ENST00000578663 KLRK1P26718 216 aa9.23□□□□□ -0.93
CDK5RAP3-209ENST00000578663 HOXD10P28358 340 aa9.23□□□□□ -0.93
CDK5RAP3-209ENST00000578663 PSMC4P43686 418 aa9.23□□□□□ -0.93
CDK5RAP3-209ENST00000578663 MAP3K9P80192 1104 aa9.23□□□□□ -0.93
CDK5RAP3-209ENST00000578663 SPDYE2Q495Y8 402 aa9.23□□□□□ -0.93
CDK5RAP3-209ENST00000578663 KHSRPQ92945 711 aaKnown RBP eCLIP9.23□□□□□ -0.93
CDK5RAP3-209ENST00000578663 COL26A1Q96A83 441 aa9.23□□□□□ -0.93
CDK5RAP3-209ENST00000578663 PRMT6Q96LA8 375 aaPredicted RBP9.23□□□□□ -0.93
CDK5RAP3-209ENST00000578663 ADGRA2Q96PE1 1338 aa9.23□□□□□ -0.93
CDK5RAP3-209ENST00000578663 AK9Q5TCS8 1911 aa9.23□□□□□ -0.93
CDK5RAP3-209ENST00000578663 A0A1B0GUL6 1792 aa9.22□□□□□ -0.93
CDK5RAP3-209ENST00000578663 IL1R1P14778 569 aa9.22□□□□□ -0.93
CDK5RAP3-209ENST00000578663 KCNJ4P48050 445 aa9.22□□□□□ -0.93
CDK5RAP3-209ENST00000578663 PRKCZQ05513 592 aa9.22□□□□□ -0.93
CDK5RAP3-209ENST00000578663 SNAPC2Q13487 334 aa9.22□□□□□ -0.93
CDK5RAP3-209ENST00000578663 GRIN2CQ14957 1233 aa9.22□□□□□ -0.93
CDK5RAP3-209ENST00000578663 C17orf99Q6UX52 265 aa9.22□□□□□ -0.93
CDK5RAP3-209ENST00000578663 ERO1BQ86YB8 467 aa9.22□□□□□ -0.93
CDK5RAP3-209ENST00000578663 TEPSINQ96N21 525 aa9.22□□□□□ -0.93
CDK5RAP3-209ENST00000578663 PLA2G12BQ9BX93 195 aa9.22□□□□□ -0.93
CDK5RAP3-209ENST00000578663 PHAXQ9H814 394 aaKnown RBP9.22□□□□□ -0.93
CDK5RAP3-209ENST00000578663 PCDHAC2Q9Y5I4 1007 aa9.22□□□□□ -0.93
CDK5RAP3-209ENST00000578663 BTBD19C9JJ37 291 aa9.21□□□□□ -0.94
CDK5RAP3-209ENST00000578663 BMP1P13497 986 aa9.21□□□□□ -0.94
CDK5RAP3-209ENST00000578663 PPIL2Q13356 520 aa9.21□□□□□ -0.94
CDK5RAP3-209ENST00000578663 POTEEQ6S8J3 1075 aa9.21□□□□□ -0.94
CDK5RAP3-209ENST00000578663 ZNF804AQ7Z570 1209 aa9.21□□□□□ -0.94
CDK5RAP3-209ENST00000578663 SLAIN1Q8ND83 568 aa9.21□□□□□ -0.94
CDK5RAP3-209ENST00000578663 JARID2Q92833 1246 aaPredicted RBP9.21□□□□□ -0.94
CDK5RAP3-209ENST00000578663 MPHOSPH8Q99549 860 aa9.21□□□□□ -0.94
CDK5RAP3-209ENST00000578663 SERPINA10Q9UK55 444 aa9.21□□□□□ -0.94
CDK5RAP3-209ENST00000578663 TRIM35Q9UPQ4 493 aa9.21□□□□□ -0.94
CDK5RAP3-209ENST00000578663 LAS1LQ9Y4W2 734 aaKnown RBP9.21□□□□□ -0.94
CDK5RAP3-209ENST00000578663 LRRC37A2A6NM11 1700 aa9.21□□□□□ -0.94
CDK5RAP3-209ENST00000578663 PFASO15067 1338 aa9.21□□□□□ -0.94
CDK5RAP3-209ENST00000578663 AOX1Q06278 1338 aa9.21□□□□□ -0.94
CDK5RAP3-209ENST00000578663 FRMPD3Q5JV73 1810 aa9.21□□□□□ -0.94
CDK5RAP3-209ENST00000578663 CHD6Q8TD26 2715 aa9.2□□□□□ -0.94
CDK5RAP3-209ENST00000578663 INHAP05111 366 aa9.2□□□□□ -0.94
CDK5RAP3-209ENST00000578663 IGKV5-2P06315 115 aa9.2□□□□□ -0.94
CDK5RAP3-209ENST00000578663 ITGA6P23229 1130 aa9.2□□□□□ -0.94
CDK5RAP3-209ENST00000578663 TNNI2P48788 182 aa9.2□□□□□ -0.94
CDK5RAP3-209ENST00000578663 SMAD3P84022 425 aaKnown RBP9.2□□□□□ -0.94
CDK5RAP3-209ENST00000578663 CHRNDQ07001 517 aa9.2□□□□□ -0.94
CDK5RAP3-209ENST00000578663 NEXNQ0ZGT2 675 aa9.2□□□□□ -0.94
CDK5RAP3-209ENST00000578663 ANKLE1Q8NAG6 615 aa9.2□□□□□ -0.94
CDK5RAP3-209ENST00000578663 PPM1EQ8WY54 764 aa9.2□□□□□ -0.94
CDK5RAP3-209ENST00000578663 HOOK2Q96ED9 719 aa9.2□□□□□ -0.94
CDK5RAP3-209ENST00000578663 ZNF70Q9UC06 446 aaPredicted RBP9.2□□□□□ -0.94
CDK5RAP3-209ENST00000578663 GABRQQ9UN88 632 aa9.2□□□□□ -0.94
CDK5RAP3-209ENST00000578663 SNCAIPQ9Y6H5 919 aa9.2□□□□□ -0.94
CDK5RAP3-209ENST00000578663 RPAP1Q9BWH6 1393 aaPredicted RBP9.2□□□□□ -0.94
CDK5RAP3-209ENST00000578663 ATRXP46100 2492 aa9.2□□□□□ -0.94
CDK5RAP3-209ENST00000578663 F8W031 263 aaPredicted RBP9.19□□□□□ -0.94
CDK5RAP3-209ENST00000578663 H7C1W4 665 aa9.19□□□□□ -0.94
CDK5RAP3-209ENST00000578663 SMIM22K7EJ46 135 aa9.19□□□□□ -0.94
CDK5RAP3-209ENST00000578663 CSF1RP07333 972 aa9.19□□□□□ -0.94
CDK5RAP3-209ENST00000578663 ZNF853P0CG23 659 aa9.19□□□□□ -0.94
CDK5RAP3-209ENST00000578663 ELNP15502 786 aa9.19□□□□□ -0.94
CDK5RAP3-209ENST00000578663 RBM5P52756 815 aaKnown RBP eCLIP9.19□□□□□ -0.94
CDK5RAP3-209ENST00000578663 SHHQ15465 462 aa9.19□□□□□ -0.94
CDK5RAP3-209ENST00000578663 C9orf50Q5SZB4 431 aa9.19□□□□□ -0.94
CDK5RAP3-209ENST00000578663 KSR2Q6VAB6 950 aa9.19□□□□□ -0.94
CDK5RAP3-209ENST00000578663 ANKRD23Q86SG2 305 aa9.19□□□□□ -0.94
CDK5RAP3-209ENST00000578663 PHOX2BQ99453 314 aa9.19□□□□□ -0.94
CDK5RAP3-209ENST00000578663 NBPF3Q9H094 633 aa9.19□□□□□ -0.94
CDK5RAP3-209ENST00000578663 C11orf49Q9H6J7 331 aa9.19□□□□□ -0.94
CDK5RAP3-209ENST00000578663 MBIPQ9NS73 344 aa9.19□□□□□ -0.94
CDK5RAP3-209ENST00000578663 MAP3K2Q9Y2U5 619 aa9.19□□□□□ -0.94
CDK5RAP3-209ENST00000578663 PLXNA1Q9UIW2 1896 aa9.19□□□□□ -0.94
CDK5RAP3-209ENST00000578663 NEURL1BA8MQ27 555 aa9.18□□□□□ -0.94
CDK5RAP3-209ENST00000578663 IRF6O14896 467 aa9.18□□□□□ -0.94
CDK5RAP3-209ENST00000578663 FMNL1O95466 1100 aaPredicted RBP9.18□□□□□ -0.94
CDK5RAP3-209ENST00000578663 FKBP1CQ5VVH2 108 aa9.18□□□□□ -0.94
CDK5RAP3-209ENST00000578663 CCDC30Q5VVM6 783 aa9.18□□□□□ -0.94
CDK5RAP3-209ENST00000578663 UBE3BQ7Z3V4 1068 aa9.18□□□□□ -0.94
CDK5RAP3-209ENST00000578663 CDAN1Q8IWY9 1227 aa9.18□□□□□ -0.94
CDK5RAP3-209ENST00000578663 RUNDC1Q96C34 613 aa9.18□□□□□ -0.94
CDK5RAP3-209ENST00000578663 FBXL18Q96ME1 805 aa9.18□□□□□ -0.94
CDK5RAP3-209ENST00000578663 TMEM39BQ9GZU3 492 aa9.18□□□□□ -0.94
CDK5RAP3-209ENST00000578663 IFT57Q9NWB7 429 aa9.18□□□□□ -0.94
CDK5RAP3-209ENST00000578663 CPA4Q9UI42 421 aa9.18□□□□□ -0.94
CDK5RAP3-209ENST00000578663 CHD7Q9P2D1 2997 aa9.18□□□□□ -0.94
CDK5RAP3-209ENST00000578663 PI4KAP2A4QPH2 592 aa9.17□□□□□ -0.94
CDK5RAP3-209ENST00000578663 ADCY3O60266 1144 aa9.17□□□□□ -0.94
CDK5RAP3-209ENST00000578663 FCGRTP55899 365 aa9.17□□□□□ -0.94
CDK5RAP3-209ENST00000578663 HDLBPQ00341 1268 aaKnown RBP9.17□□□□□ -0.94
CDK5RAP3-209ENST00000578663 CALD1Q05682 793 aaKnown RBP9.17□□□□□ -0.94
CDK5RAP3-209ENST00000578663 PPATQ06203 517 aa9.17□□□□□ -0.94
CDK5RAP3-209ENST00000578663 NEUROD2Q15784 382 aa9.17□□□□□ -0.94
CDK5RAP3-209ENST00000578663 FAM83AQ86UY5 434 aa9.17□□□□□ -0.94
CDK5RAP3-209ENST00000578663 DZIP1LQ8IYY4 767 aaKnown RBP9.17□□□□□ -0.94
CDK5RAP3-209ENST00000578663 PI4KAP1Q8N8J0 262 aa9.17□□□□□ -0.94
CDK5RAP3-209ENST00000578663 PXYLP1Q8TE99 480 aa9.17□□□□□ -0.94
CDK5RAP3-209ENST00000578663 WRNIP1Q96S55 665 aa9.17□□□□□ -0.94
CDK5RAP3-209ENST00000578663 TDRD3Q9H7E2 651 aaKnown RBP9.17□□□□□ -0.94
CDK5RAP3-209ENST00000578663 TTF2Q9UNY4 1162 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms