RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 TIMM10P62072 90 aa5.6□□□□□ -1.51
PPP4R1-209ENST00000578329 MAP3K9P80192 1104 aa5.6□□□□□ -1.51
PPP4R1-209ENST00000578329 MAP3K10Q02779 954 aa5.6□□□□□ -1.51
PPP4R1-209ENST00000578329 PUM3Q15397 648 aaKnown RBP5.6□□□□□ -1.51
PPP4R1-209ENST00000578329 TAF7LQ5H9L4 462 aa5.6□□□□□ -1.51
PPP4R1-209ENST00000578329 FKBP1CQ5VVH2 108 aa5.6□□□□□ -1.51
PPP4R1-209ENST00000578329 GPAT2Q6NUI2 795 aa5.6□□□□□ -1.51
PPP4R1-209ENST00000578329 POTEEQ6S8J3 1075 aa5.6□□□□□ -1.51
PPP4R1-209ENST00000578329 HHIPL2Q6UWX4 724 aa5.6□□□□□ -1.51
PPP4R1-209ENST00000578329 MIGA2Q7L4E1 593 aa5.6□□□□□ -1.51
PPP4R1-209ENST00000578329 FAM83AQ86UY5 434 aa5.6□□□□□ -1.51
PPP4R1-209ENST00000578329 ANKRD13AQ8IZ07 590 aa5.6□□□□□ -1.51
PPP4R1-209ENST00000578329 SP7Q8TDD2 431 aaPredicted RBP5.6□□□□□ -1.51
PPP4R1-209ENST00000578329 ARMC5Q96C12 935 aa5.6□□□□□ -1.51
PPP4R1-209ENST00000578329 SIL1Q9H173 461 aa5.6□□□□□ -1.51
PPP4R1-209ENST00000578329 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.6□□□□□ -1.51
PPP4R1-209ENST00000578329 PTPN22Q9Y2R2 807 aa5.6□□□□□ -1.51
PPP4R1-209ENST00000578329 MYH2Q9UKX2 1941 aa5.6□□□□□ -1.51
PPP4R1-209ENST00000578329 RANBP2P49792 3224 aaKnown RBP5.59□□□□□ -1.51
PPP4R1-209ENST00000578329 SALL1Q9NSC2 1324 aa5.59□□□□□ -1.51
PPP4R1-209ENST00000578329 DDTLA6NHG4 134 aaPredicted RBP5.59□□□□□ -1.51
PPP4R1-209ENST00000578329 EN2P19622 333 aaPredicted RBP5.59□□□□□ -1.51
PPP4R1-209ENST00000578329 NF2P35240 595 aa5.59□□□□□ -1.51
PPP4R1-209ENST00000578329 RBM5P52756 815 aaKnown RBP eCLIP5.59□□□□□ -1.51
PPP4R1-209ENST00000578329 SREBF2Q12772 1141 aa5.59□□□□□ -1.51
PPP4R1-209ENST00000578329 TFCP2Q12800 502 aa5.59□□□□□ -1.51
PPP4R1-209ENST00000578329 SHROOM1Q2M3G4 852 aaPredicted RBP5.59□□□□□ -1.51
PPP4R1-209ENST00000578329 SUPT20HL1Q3ZLR7 823 aa5.59□□□□□ -1.51
PPP4R1-209ENST00000578329 CCDC102BQ68D86 513 aa5.59□□□□□ -1.51
PPP4R1-209ENST00000578329 C17orf99Q6UX52 265 aa5.59□□□□□ -1.51
PPP4R1-209ENST00000578329 ADGRA1Q86SQ6 560 aa5.59□□□□□ -1.51
PPP4R1-209ENST00000578329 CCDC84Q86UT8 332 aaPredicted RBP5.59□□□□□ -1.51
PPP4R1-209ENST00000578329 LPIN2Q92539 896 aa5.59□□□□□ -1.51
PPP4R1-209ENST00000578329 SHISA4Q96DD7 197 aa5.59□□□□□ -1.51
PPP4R1-209ENST00000578329 OTUD5Q96G74 571 aa5.59□□□□□ -1.51
PPP4R1-209ENST00000578329 ZNF333Q96JL9 665 aa5.59□□□□□ -1.51
PPP4R1-209ENST00000578329 SMC4Q9NTJ3 1288 aa5.59□□□□□ -1.51
PPP4R1-209ENST00000578329 KCNH4Q9UQ05 1017 aa5.59□□□□□ -1.51
PPP4R1-209ENST00000578329 TRIM17Q9Y577 477 aa5.59□□□□□ -1.51
PPP4R1-209ENST00000578329 CDK5RAP2Q96SN8 1893 aa5.59□□□□□ -1.51
PPP4R1-209ENST00000578329 DOCK3Q8IZD9 2030 aa5.58□□□□□ -1.52
PPP4R1-209ENST00000578329 DOCK2Q92608 1830 aa5.58□□□□□ -1.52
PPP4R1-209ENST00000578329 CCL15-CCL14A0A0B4J2E2 113 aa5.58□□□□□ -1.52
PPP4R1-209ENST00000578329 CCER2I3L3R5 266 aa5.58□□□□□ -1.52
PPP4R1-209ENST00000578329 PPP1R12BO60237 982 aaPredicted RBP5.58□□□□□ -1.52
PPP4R1-209ENST00000578329 IREB2P48200 963 aaKnown RBP5.58□□□□□ -1.52
PPP4R1-209ENST00000578329 INHBEP58166 350 aa5.58□□□□□ -1.52
PPP4R1-209ENST00000578329 TCP10Q12799 353 aa5.58□□□□□ -1.52
PPP4R1-209ENST00000578329 POLA2Q14181 598 aa5.58□□□□□ -1.52
PPP4R1-209ENST00000578329 PKN2Q16513 984 aaKnown RBP5.58□□□□□ -1.52
PPP4R1-209ENST00000578329 CCL15Q16663 113 aa5.58□□□□□ -1.52
PPP4R1-209ENST00000578329 ATP2B3Q16720 1220 aa5.58□□□□□ -1.52
PPP4R1-209ENST00000578329 NOL9Q5SY16 702 aaKnown RBP5.58□□□□□ -1.52
PPP4R1-209ENST00000578329 TBC1D9Q6ZT07 1266 aa5.58□□□□□ -1.52
PPP4R1-209ENST00000578329 UBE2Q1Q7Z7E8 422 aa5.58□□□□□ -1.52
PPP4R1-209ENST00000578329 TBC1D22AQ8WUA7 517 aa5.58□□□□□ -1.52
PPP4R1-209ENST00000578329 FAM151AQ8WW52 585 aa5.58□□□□□ -1.52
PPP4R1-209ENST00000578329 TEKT1Q969V4 418 aa5.58□□□□□ -1.52
PPP4R1-209ENST00000578329 FAM163AQ96GL9 167 aaPredicted RBP5.58□□□□□ -1.52
PPP4R1-209ENST00000578329 TRIM47Q96LD4 638 aa5.58□□□□□ -1.52
PPP4R1-209ENST00000578329 WRNIP1Q96S55 665 aa5.58□□□□□ -1.52
PPP4R1-209ENST00000578329 DNAJC18Q9H819 358 aa5.58□□□□□ -1.52
PPP4R1-209ENST00000578329 HMG20BQ9P0W2 317 aa5.58□□□□□ -1.52
PPP4R1-209ENST00000578329 SUGT1Q9Y2Z0 365 aa5.58□□□□□ -1.52
PPP4R1-209ENST00000578329 PTCH2Q9Y6C5 1203 aa5.58□□□□□ -1.52
PPP4R1-209ENST00000578329 PLXNB2O15031 1838 aa5.58□□□□□ -1.52
PPP4R1-209ENST00000578329 TRIOBPQ9H2D6 2365 aa5.57□□□□□ -1.52
PPP4R1-209ENST00000578329 A0A1B0GUL7 405 aa5.57□□□□□ -1.52
PPP4R1-209ENST00000578329 FAM196BA6NMK8 535 aa5.57□□□□□ -1.52
PPP4R1-209ENST00000578329 MYO1BO43795 1136 aa5.57□□□□□ -1.52
PPP4R1-209ENST00000578329 TLR2O60603 784 aa5.57□□□□□ -1.52
PPP4R1-209ENST00000578329 PEX10O60683 326 aa5.57□□□□□ -1.52
PPP4R1-209ENST00000578329 ALDH1A1P00352 501 aa5.57□□□□□ -1.52
PPP4R1-209ENST00000578329 IFIT1P09914 478 aaKnown RBP5.57□□□□□ -1.52
PPP4R1-209ENST00000578329 UBTFL1P0CB47 393 aaPredicted RBP5.57□□□□□ -1.52
PPP4R1-209ENST00000578329 BCRP11274 1271 aa5.57□□□□□ -1.52
PPP4R1-209ENST00000578329 IL15P40933 162 aaPredicted RBP5.57□□□□□ -1.52
PPP4R1-209ENST00000578329 MCAMP43121 646 aa5.57□□□□□ -1.52
PPP4R1-209ENST00000578329 RGS3P49796 1198 aa5.57□□□□□ -1.52
PPP4R1-209ENST00000578329 SP3Q02447 781 aa5.57□□□□□ -1.52
PPP4R1-209ENST00000578329 MECOMQ03112 1051 aa5.57□□□□□ -1.52
PPP4R1-209ENST00000578329 EVX2Q03828 476 aa5.57□□□□□ -1.52
PPP4R1-209ENST00000578329 PPIL2Q13356 520 aa5.57□□□□□ -1.52
PPP4R1-209ENST00000578329 ERO1BQ86YB8 467 aa5.57□□□□□ -1.52
PPP4R1-209ENST00000578329 MIER1Q8N108 512 aa5.57□□□□□ -1.52
PPP4R1-209ENST00000578329 TMEM57Q8N5G2 664 aa5.57□□□□□ -1.52
PPP4R1-209ENST00000578329 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.57□□□□□ -1.52
PPP4R1-209ENST00000578329 ARHGAP45Q92619 1136 aa5.57□□□□□ -1.52
PPP4R1-209ENST00000578329 XAGE2Q96GT9 111 aa5.57□□□□□ -1.52
PPP4R1-209ENST00000578329 IDI2Q9BXS1 227 aa5.57□□□□□ -1.52
PPP4R1-209ENST00000578329 PCDH10Q9P2E7 1040 aa5.57□□□□□ -1.52
PPP4R1-209ENST00000578329 FBXO3Q9UK99 471 aa5.57□□□□□ -1.52
PPP4R1-209ENST00000578329 SZT2Q5T011 3432 aa5.57□□□□□ -1.52
PPP4R1-209ENST00000578329 MGAMO43451 1857 aa5.56□□□□□ -1.52
PPP4R1-209ENST00000578329 DOCK1Q14185 1865 aa5.56□□□□□ -1.52
PPP4R1-209ENST00000578329 PDS5AQ29RF7 1337 aaKnown RBP5.56□□□□□ -1.52
PPP4R1-209ENST00000578329 FOCADQ5VW36 1801 aa5.56□□□□□ -1.52
PPP4R1-209ENST00000578329 GPR75-ASB3A0A0A6YYF3 556 aa5.56□□□□□ -1.52
PPP4R1-209ENST00000578329 CT47B1P0C2W7 299 aaPredicted RBP5.56□□□□□ -1.52
PPP4R1-209ENST00000578329 CYP2C8P10632 490 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms