RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-208	ENST00000578178	TNS4	Q8IZW8	715 aa		13.44	□□□□□ -0.26
PPP4R1-208	ENST00000578178	DBNDD2	Q9BQY9	259 aa		13.44	□□□□□ -0.26
PPP4R1-208	ENST00000578178	SAGE1	Q9NXZ1	904 aa		13.44	□□□□□ -0.26
PPP4R1-208	ENST00000578178	TSKS	Q9UJT2	592 aa		13.44	□□□□□ -0.26
PPP4R1-208	ENST00000578178	EXOC6B	Q9Y2D4	811 aa		13.44	□□□□□ -0.26
PPP4R1-208	ENST00000578178	DOCK2	Q92608	1830 aa		13.43	□□□□□ -0.26
PPP4R1-208	ENST00000578178	HMMR	O75330	724 aa		13.43	□□□□□ -0.26
PPP4R1-208	ENST00000578178	HSP90AB4P	Q58FF6	505 aa		13.43	□□□□□ -0.26
PPP4R1-208	ENST00000578178	CCDC158	Q5M9N0	1113 aa		13.43	□□□□□ -0.26
PPP4R1-208	ENST00000578178	TTC39A	Q5SRH9	613 aa		13.43	□□□□□ -0.26
PPP4R1-208	ENST00000578178	C20orf194	Q5TEA3	1177 aa		13.43	□□□□□ -0.26
PPP4R1-208	ENST00000578178	ERICH6	Q7L0X2	663 aa		13.43	□□□□□ -0.26
PPP4R1-208	ENST00000578178	SLF2	Q8IX21	1173 aa		13.43	□□□□□ -0.26
PPP4R1-208	ENST00000578178	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.43	□□□□□ -0.26
PPP4R1-208	ENST00000578178	RFX7	Q2KHR2	1363 aa		13.43	□□□□□ -0.26
PPP4R1-208	ENST00000578178	MROH7-TTC4	A0A0A0MT08	1334 aa		13.42	□□□□□ -0.26
PPP4R1-208	ENST00000578178	USP2	O75604	605 aa	Predicted RBP	13.42	□□□□□ -0.26
PPP4R1-208	ENST00000578178	MKRN3	Q13064	507 aa	Known RBP	13.42	□□□□□ -0.26
PPP4R1-208	ENST00000578178	IFFO2	Q5TF58	517 aa		13.42	□□□□□ -0.26
PPP4R1-208	ENST00000578178	SPRYD7	Q5W111	196 aa		13.42	□□□□□ -0.26
PPP4R1-208	ENST00000578178	CDC42EP5	Q6NZY7	148 aa		13.42	□□□□□ -0.26
PPP4R1-208	ENST00000578178	ANKRD13A	Q8IZ07	590 aa		13.42	□□□□□ -0.26
PPP4R1-208	ENST00000578178	HOOK2	Q96ED9	719 aa		13.42	□□□□□ -0.26
PPP4R1-208	ENST00000578178	CLMN	Q96JQ2	1002 aa		13.42	□□□□□ -0.26
PPP4R1-208	ENST00000578178	CSRNP1	Q96S65	589 aa		13.42	□□□□□ -0.26
PPP4R1-208	ENST00000578178	DBNL	Q9UJU6	430 aa	Known RBP	13.42	□□□□□ -0.26
PPP4R1-208	ENST00000578178	AK9	Q5TCS8	1911 aa		13.42	□□□□□ -0.26
PPP4R1-208	ENST00000578178	ZBTB48	P10074	688 aa	Predicted RBP	13.41	□□□□□ -0.26
PPP4R1-208	ENST00000578178	MECOM	Q03112	1051 aa		13.41	□□□□□ -0.26
PPP4R1-208	ENST00000578178	SREBF2	Q12772	1141 aa		13.41	□□□□□ -0.26
PPP4R1-208	ENST00000578178	FAM151A	Q8WW52	585 aa		13.41	□□□□□ -0.26
PPP4R1-208	ENST00000578178	EAF2	Q96CJ1	260 aa	Predicted RBP	13.41	□□□□□ -0.26
PPP4R1-208	ENST00000578178	SLC10A4	Q96EP9	437 aa		13.41	□□□□□ -0.26
PPP4R1-208	ENST00000578178	FAM163A	Q96GL9	167 aa	Predicted RBP	13.41	□□□□□ -0.26
PPP4R1-208	ENST00000578178	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.41	□□□□□ -0.26
PPP4R1-208	ENST00000578178	TLR7	Q9NYK1	1049 aa	Known RBP	13.41	□□□□□ -0.26
PPP4R1-208	ENST00000578178	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.4	□□□□□ -0.26
PPP4R1-208	ENST00000578178	CASP8AP2	Q9UKL3	1982 aa		13.4	□□□□□ -0.26
PPP4R1-208	ENST00000578178	BTD	P43251	543 aa		13.4	□□□□□ -0.26
PPP4R1-208	ENST00000578178	GSTO1	P78417	241 aa		13.4	□□□□□ -0.26
PPP4R1-208	ENST00000578178	NFIA	Q12857	509 aa		13.4	□□□□□ -0.26
PPP4R1-208	ENST00000578178	TBC1D9	Q6ZT07	1266 aa		13.4	□□□□□ -0.26
PPP4R1-208	ENST00000578178	AACS	Q86V21	672 aa		13.4	□□□□□ -0.26
PPP4R1-208	ENST00000578178	SIRT2	Q8IXJ6	389 aa		13.4	□□□□□ -0.26
PPP4R1-208	ENST00000578178	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
PPP4R1-208	ENST00000578178	ZNF384	Q8TF68	577 aa		13.4	□□□□□ -0.26
PPP4R1-208	ENST00000578178	WNK4	Q96J92	1243 aa		13.4	□□□□□ -0.26
PPP4R1-208	ENST00000578178	YTHDC1	Q96MU7	727 aa	Known RBP	13.4	□□□□□ -0.26
PPP4R1-208	ENST00000578178	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.4	□□□□□ -0.26
PPP4R1-208	ENST00000578178	USP40	Q9NVE5	1235 aa		13.4	□□□□□ -0.26
PPP4R1-208	ENST00000578178	RNF186	Q9NXI6	227 aa		13.4	□□□□□ -0.26
PPP4R1-208	ENST00000578178	TRPA1	O75762	1119 aa		13.39	□□□□□ -0.27
PPP4R1-208	ENST00000578178	TCP10	Q12799	353 aa		13.39	□□□□□ -0.27
PPP4R1-208	ENST00000578178	DCAF15	Q66K64	600 aa		13.39	□□□□□ -0.27
PPP4R1-208	ENST00000578178	RHPN1	Q8TCX5	695 aa		13.39	□□□□□ -0.27
PPP4R1-208	ENST00000578178	NSUN4	Q96CB9	384 aa	Known RBP	13.39	□□□□□ -0.27
PPP4R1-208	ENST00000578178	KIF1BP	Q96EK5	621 aa		13.39	□□□□□ -0.27
PPP4R1-208	ENST00000578178	IDI2	Q9BXS1	227 aa		13.39	□□□□□ -0.27
PPP4R1-208	ENST00000578178	RAI14	Q9P0K7	980 aa		13.39	□□□□□ -0.27
PPP4R1-208	ENST00000578178	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.39	□□□□□ -0.27
PPP4R1-208	ENST00000578178	LRP2BP	Q9P2M1	347 aa		13.39	□□□□□ -0.27
PPP4R1-208	ENST00000578178	FAM198A	Q9UFP1	575 aa		13.39	□□□□□ -0.27
PPP4R1-208	ENST00000578178	GPR75-ASB3	A0A0A6YYF3	556 aa		13.38	□□□□□ -0.27
PPP4R1-208	ENST00000578178	MANSC4	A6NHS7	340 aa	Predicted RBP	13.38	□□□□□ -0.27
PPP4R1-208	ENST00000578178	ENTPD3	O75355	529 aa		13.38	□□□□□ -0.27
PPP4R1-208	ENST00000578178	LDHC	P07864	332 aa		13.38	□□□□□ -0.27
PPP4R1-208	ENST00000578178	TM4SF4	P48230	202 aa		13.38	□□□□□ -0.27
PPP4R1-208	ENST00000578178	MAP3K9	P80192	1104 aa		13.38	□□□□□ -0.27
PPP4R1-208	ENST00000578178	VGLL4	Q14135	290 aa		13.38	□□□□□ -0.27
PPP4R1-208	ENST00000578178	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	13.38	□□□□□ -0.27
PPP4R1-208	ENST00000578178	WRNIP1	Q96S55	665 aa		13.38	□□□□□ -0.27
PPP4R1-208	ENST00000578178	ELP3	Q9H9T3	547 aa		13.38	□□□□□ -0.27
PPP4R1-208	ENST00000578178	IL1RAPL2	Q9NP60	686 aa		13.38	□□□□□ -0.27
PPP4R1-208	ENST00000578178	SNRK	Q9NRH2	765 aa		13.38	□□□□□ -0.27
PPP4R1-208	ENST00000578178	CSAD	Q9Y600	493 aa		13.38	□□□□□ -0.27
PPP4R1-208	ENST00000578178	ATRNL1	Q5VV63	1379 aa		13.37	□□□□□ -0.27
PPP4R1-208	ENST00000578178	IGSF3	O75054	1194 aa		13.37	□□□□□ -0.27
PPP4R1-208	ENST00000578178	RAB11FIP3	O75154	756 aa		13.37	□□□□□ -0.27
PPP4R1-208	ENST00000578178	WDHD1	O75717	1129 aa	Predicted RBP	13.37	□□□□□ -0.27
PPP4R1-208	ENST00000578178	CYP2E1	P05181	493 aa	Predicted RBP	13.37	□□□□□ -0.27
PPP4R1-208	ENST00000578178	GJA5	P36382	358 aa		13.37	□□□□□ -0.27
PPP4R1-208	ENST00000578178	ZAP70	P43403	619 aa		13.37	□□□□□ -0.27
PPP4R1-208	ENST00000578178	RGS3	P49796	1198 aa		13.37	□□□□□ -0.27
PPP4R1-208	ENST00000578178	RRP1	P56182	461 aa	Known RBP	13.37	□□□□□ -0.27
PPP4R1-208	ENST00000578178	CLASRP	Q8N2M8	674 aa	Known RBP	13.37	□□□□□ -0.27
PPP4R1-208	ENST00000578178	OPTN	Q96CV9	577 aa		13.37	□□□□□ -0.27
PPP4R1-208	ENST00000578178	ZNF341	Q9BYN7	854 aa		13.37	□□□□□ -0.27
PPP4R1-208	ENST00000578178	FOCAD	Q5VW36	1801 aa		13.36	□□□□□ -0.27
PPP4R1-208	ENST00000578178	COL2A1	P02458	1487 aa	Predicted RBP	13.36	□□□□□ -0.27
PPP4R1-208	ENST00000578178	CDK5RAP2	Q96SN8	1893 aa		13.36	□□□□□ -0.27
PPP4R1-208	ENST00000578178	APBB1	O00213	710 aa		13.36	□□□□□ -0.27
PPP4R1-208	ENST00000578178	MAP4K4	O95819	1239 aa	Predicted RBP	13.36	□□□□□ -0.27
PPP4R1-208	ENST00000578178	RHBDL3	P58872	404 aa		13.36	□□□□□ -0.27
PPP4R1-208	ENST00000578178	NAA16	Q6N069	864 aa	Predicted RBP	13.36	□□□□□ -0.27
PPP4R1-208	ENST00000578178	SNCAIP	Q9Y6H5	919 aa		13.36	□□□□□ -0.27
PPP4R1-208	ENST00000578178	SPDYE5	A6NIY4	337 aa		13.35	□□□□□ -0.27
PPP4R1-208	ENST00000578178	ALDH1A1	P00352	501 aa		13.35	□□□□□ -0.27
PPP4R1-208	ENST00000578178	INHBE	P58166	350 aa		13.35	□□□□□ -0.27
PPP4R1-208	ENST00000578178	PICALM	Q13492	652 aa		13.35	□□□□□ -0.27
PPP4R1-208	ENST00000578178	MIGA2	Q7L4E1	593 aa		13.35	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms