RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 OTUD5Q96G74 571 aa14.05□□□□□ -0.16
SMARCE1-214ENST00000578112 JAG2Q9Y219 1238 aa14.05□□□□□ -0.16
SMARCE1-214ENST00000578112 SLC45A1Q9Y2W3 748 aa14.05□□□□□ -0.16
SMARCE1-214ENST00000578112 ZNF316A6NFI3 1004 aaPredicted RBP14.04□□□□□ -0.16
SMARCE1-214ENST00000578112 LACTBP83111 547 aaPredicted RBP14.04□□□□□ -0.16
SMARCE1-214ENST00000578112 CHAF1AQ13111 956 aaPredicted RBP14.04□□□□□ -0.16
SMARCE1-214ENST00000578112 LRRC24Q50LG9 513 aa14.04□□□□□ -0.16
SMARCE1-214ENST00000578112 FAM43AQ8N2R8 423 aa14.04□□□□□ -0.16
SMARCE1-214ENST00000578112 WRNIP1Q96S55 665 aa14.04□□□□□ -0.16
SMARCE1-214ENST00000578112 DOCK2Q92608 1830 aa14.04□□□□□ -0.16
SMARCE1-214ENST00000578112 ADGRA2Q96PE1 1338 aa14.04□□□□□ -0.16
SMARCE1-214ENST00000578112 CXCL11O14625 94 aa14.04□□□□□ -0.16
SMARCE1-214ENST00000578112 RFX5P48382 616 aaPredicted RBP14.04□□□□□ -0.16
SMARCE1-214ENST00000578112 HABP4Q5JVS0 413 aaKnown RBP14.04□□□□□ -0.16
SMARCE1-214ENST00000578112 PDE4DIPQ5VU43 2346 aa14.04□□□□□ -0.16
SMARCE1-214ENST00000578112 IGSF3O75054 1194 aa14.03□□□□□ -0.16
SMARCE1-214ENST00000578112 C17orf99Q6UX52 265 aa14.03□□□□□ -0.16
SMARCE1-214ENST00000578112 SLF2Q8IX21 1173 aa14.03□□□□□ -0.16
SMARCE1-214ENST00000578112 USP44Q9H0E7 712 aa14.03□□□□□ -0.16
SMARCE1-214ENST00000578112 DENND2AQ9ULE3 1009 aa14.03□□□□□ -0.16
SMARCE1-214ENST00000578112 PTCH2Q9Y6C5 1203 aa14.03□□□□□ -0.16
SMARCE1-214ENST00000578112 BTBD19C9JJ37 291 aa14.03□□□□□ -0.16
SMARCE1-214ENST00000578112 ENTPD3O75355 529 aa14.03□□□□□ -0.16
SMARCE1-214ENST00000578112 COL2A1P02458 1487 aaPredicted RBP14.02□□□□□ -0.16
SMARCE1-214ENST00000578112 BCAMP50895 628 aa14.02□□□□□ -0.16
SMARCE1-214ENST00000578112 TBC1D2Q9BYX2 928 aa14.02□□□□□ -0.16
SMARCE1-214ENST00000578112 NPM3O75607 178 aaKnown RBP14.02□□□□□ -0.17
SMARCE1-214ENST00000578112 PARK7Q99497 189 aaKnown RBP14.02□□□□□ -0.17
SMARCE1-214ENST00000578112 IL15P40933 162 aaPredicted RBP14.01□□□□□ -0.17
SMARCE1-214ENST00000578112 MAP3K10Q02779 954 aa14.01□□□□□ -0.17
SMARCE1-214ENST00000578112 GRIK5Q16478 980 aa14.01□□□□□ -0.17
SMARCE1-214ENST00000578112 IDI2Q9BXS1 227 aa14.01□□□□□ -0.17
SMARCE1-214ENST00000578112 IRF6O14896 467 aa14.01□□□□□ -0.17
SMARCE1-214ENST00000578112 EIF5BO60841 1220 aaKnown RBP14.01□□□□□ -0.17
SMARCE1-214ENST00000578112 FASTKD5Q7L8L6 764 aaKnown RBP14.01□□□□□ -0.17
SMARCE1-214ENST00000578112 SRRDQ9UH36 339 aa14.01□□□□□ -0.17
SMARCE1-214ENST00000578112 SALL2Q9Y467 1007 aaPredicted RBP14.01□□□□□ -0.17
SMARCE1-214ENST00000578112 DAGLAQ9Y4D2 1042 aa14.01□□□□□ -0.17
SMARCE1-214ENST00000578112 RFX7Q2KHR2 1363 aa14□□□□□ -0.17
SMARCE1-214ENST00000578112 SLFN5Q08AF3 891 aa14□□□□□ -0.17
SMARCE1-214ENST00000578112 SLC4A8Q2Y0W8 1093 aa14□□□□□ -0.17
SMARCE1-214ENST00000578112 CDAN1Q8IWY9 1227 aa14□□□□□ -0.17
SMARCE1-214ENST00000578112 CNKSR2Q8WXI2 1034 aa14□□□□□ -0.17
SMARCE1-214ENST00000578112 FAM163AQ96GL9 167 aaPredicted RBP14□□□□□ -0.17
SMARCE1-214ENST00000578112 API5Q9BZZ5 524 aaKnown RBP14□□□□□ -0.17
SMARCE1-214ENST00000578112 CEP126Q9P2H0 1117 aa14□□□□□ -0.17
SMARCE1-214ENST00000578112 GAKO14976 1311 aa14□□□□□ -0.17
SMARCE1-214ENST00000578112 LDHBP07195 334 aaKnown RBP14□□□□□ -0.17
SMARCE1-214ENST00000578112 EN2P19622 333 aaPredicted RBP14□□□□□ -0.17
SMARCE1-214ENST00000578112 SPTY2D1Q68D10 685 aaPredicted RBP14□□□□□ -0.17
SMARCE1-214ENST00000578112 ATG9AQ7Z3C6 839 aa14□□□□□ -0.17
SMARCE1-214ENST00000578112 SSH1Q8WYL5 1049 aa14□□□□□ -0.17
SMARCE1-214ENST00000578112 TRIM47Q96LD4 638 aa14□□□□□ -0.17
SMARCE1-214ENST00000578112 DOCK1Q14185 1865 aa13.99□□□□□ -0.17
SMARCE1-214ENST00000578112 ATP2B3Q16720 1220 aa13.99□□□□□ -0.17
SMARCE1-214ENST00000578112 CDC42EP5Q6NZY7 148 aa13.99□□□□□ -0.17
SMARCE1-214ENST00000578112 MGAMO43451 1857 aa13.99□□□□□ -0.17
SMARCE1-214ENST00000578112 UBXN2AP68543 259 aa13.98□□□□□ -0.17
SMARCE1-214ENST00000578112 SLAIN1Q8ND83 568 aa13.98□□□□□ -0.17
SMARCE1-214ENST00000578112 BCL11AQ9H165 835 aa13.98□□□□□ -0.17
SMARCE1-214ENST00000578112 COPRSQ9NQ92 184 aa13.98□□□□□ -0.17
SMARCE1-214ENST00000578112 ATRNL1Q5VV63 1379 aa13.98□□□□□ -0.17
SMARCE1-214ENST00000578112 UBTFL1P0CB47 393 aaPredicted RBP13.98□□□□□ -0.17
SMARCE1-214ENST00000578112 FCGRTP55899 365 aa13.98□□□□□ -0.17
SMARCE1-214ENST00000578112 TRMT2AQ8IZ69 625 aaKnown RBP13.98□□□□□ -0.17
SMARCE1-214ENST00000578112 FAM9BQ8IZU0 186 aa13.98□□□□□ -0.17
SMARCE1-214ENST00000578112 ZKSCAN4Q969J2 545 aaPredicted RBP13.98□□□□□ -0.17
SMARCE1-214ENST00000578112 IQSEC3Q9UPP2 1182 aaPredicted RBP13.98□□□□□ -0.17
SMARCE1-214ENST00000578112 PDHXO00330 501 aa13.97□□□□□ -0.17
SMARCE1-214ENST00000578112 CAP1Q01518 475 aa13.97□□□□□ -0.17
SMARCE1-214ENST00000578112 MOGSQ13724 837 aa13.97□□□□□ -0.17
SMARCE1-214ENST00000578112 SCYL3Q8IZE3 742 aa13.97□□□□□ -0.17
SMARCE1-214ENST00000578112 HTATIP2Q9BUP3 242 aa13.97□□□□□ -0.17
SMARCE1-214ENST00000578112 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.97□□□□□ -0.17
SMARCE1-214ENST00000578112 A0A0G2JLL6 359 aaPredicted RBP13.97□□□□□ -0.17
SMARCE1-214ENST00000578112 TBC1D12O60347 775 aa13.97□□□□□ -0.17
SMARCE1-214ENST00000578112 BCRP11274 1271 aa13.97□□□□□ -0.17
SMARCE1-214ENST00000578112 PRRT2Q7Z6L0 340 aaPredicted RBP13.97□□□□□ -0.17
SMARCE1-214ENST00000578112 ARHGAP45Q92619 1136 aa13.97□□□□□ -0.17
SMARCE1-214ENST00000578112 AKAP2Q9Y2D5 859 aa13.97□□□□□ -0.17
SMARCE1-214ENST00000578112 CACNB3P54284 484 aa13.96□□□□□ -0.17
SMARCE1-214ENST00000578112 IRF5Q13568 498 aa13.96□□□□□ -0.17
SMARCE1-214ENST00000578112 USP40Q9NVE5 1235 aa13.96□□□□□ -0.17
SMARCE1-214ENST00000578112 FAM198AQ9UFP1 575 aa13.96□□□□□ -0.17
SMARCE1-214ENST00000578112 MYPNQ86TC9 1320 aa13.96□□□□□ -0.17
SMARCE1-214ENST00000578112 GJB1P08034 283 aa13.96□□□□□ -0.18
SMARCE1-214ENST00000578112 GRK4P32298 578 aa13.96□□□□□ -0.18
SMARCE1-214ENST00000578112 PICK1Q9NRD5 415 aa13.96□□□□□ -0.18
SMARCE1-214ENST00000578112 MYH2Q9UKX2 1941 aa13.96□□□□□ -0.18
SMARCE1-214ENST00000578112 CTNND1O60716 968 aaKnown RBP13.95□□□□□ -0.18
SMARCE1-214ENST00000578112 INPP5BP32019 993 aa13.95□□□□□ -0.18
SMARCE1-214ENST00000578112 PSMC4P43686 418 aa13.95□□□□□ -0.18
SMARCE1-214ENST00000578112 GJA8P48165 433 aa13.95□□□□□ -0.18
SMARCE1-214ENST00000578112 MTX1Q13505 466 aa13.95□□□□□ -0.18
SMARCE1-214ENST00000578112 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.95□□□□□ -0.18
SMARCE1-214ENST00000578112 RAET1EQ8TD07 263 aa13.95□□□□□ -0.18
SMARCE1-214ENST00000578112 PXYLP1Q8TE99 480 aa13.95□□□□□ -0.18
SMARCE1-214ENST00000578112 PHIPQ8WWQ0 1821 aa13.95□□□□□ -0.18
SMARCE1-214ENST00000578112 LOC285556D6RIA3 1793 aa13.95□□□□□ -0.18
SMARCE1-214ENST00000578112 A0A1W2PPC1 479 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms