RNA–Protein interactions for RNA: ENST00000578009.5

IFT20-205, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-205ENST00000578009 FBXL18Q96ME1 805 aa6.94□□□□□ -1.3
IFT20-205ENST00000578009 ABCC2Q92887 1545 aa6.94□□□□□ -1.3
IFT20-205ENST00000578009 DNMT1P26358 1616 aaKnown RBP6.94□□□□□ -1.3
IFT20-205ENST00000578009 ITSN2Q9NZM3 1697 aa6.93□□□□□ -1.3
IFT20-205ENST00000578009 ADGRL2O95490 1459 aa6.93□□□□□ -1.3
IFT20-205ENST00000578009 SOX1O00570 391 aaPredicted RBP6.93□□□□□ -1.3
IFT20-205ENST00000578009 CYP26A1O43174 497 aa6.93□□□□□ -1.3
IFT20-205ENST00000578009 RPLP1P05386 114 aaKnown RBP6.93□□□□□ -1.3
IFT20-205ENST00000578009 DRD2P14416 443 aa6.93□□□□□ -1.3
IFT20-205ENST00000578009 JAG1P78504 1218 aa6.93□□□□□ -1.3
IFT20-205ENST00000578009 KRTAP5-3Q6L8H2 238 aa6.93□□□□□ -1.3
IFT20-205ENST00000578009 VSIG10LQ86VR7 867 aa6.93□□□□□ -1.3
IFT20-205ENST00000578009 SMG8Q8ND04 991 aaKnown RBP6.93□□□□□ -1.3
IFT20-205ENST00000578009 TTC16Q8NEE8 873 aa6.93□□□□□ -1.3
IFT20-205ENST00000578009 FBLIM1Q8WUP2 373 aa6.93□□□□□ -1.3
IFT20-205ENST00000578009 EDEM1Q92611 657 aa6.93□□□□□ -1.3
IFT20-205ENST00000578009 METTL22Q9BUU2 404 aaPredicted RBP6.93□□□□□ -1.3
IFT20-205ENST00000578009 TMPRSS13Q9BYE2 586 aa6.93□□□□□ -1.3
IFT20-205ENST00000578009 KIF14Q15058 1648 aa6.93□□□□□ -1.3
IFT20-205ENST00000578009 NCOA1Q15788 1441 aa6.93□□□□□ -1.3
IFT20-205ENST00000578009 CAMSAP2Q08AD1 1489 aa6.92□□□□□ -1.3
IFT20-205ENST00000578009 PPP1R15AO75807 674 aaPredicted RBP6.92□□□□□ -1.3
IFT20-205ENST00000578009 TIAF1O95411 115 aa6.92□□□□□ -1.3
IFT20-205ENST00000578009 PRNPP04156 253 aa6.92□□□□□ -1.3
IFT20-205ENST00000578009 PCSK2P16519 638 aa6.92□□□□□ -1.3
IFT20-205ENST00000578009 DNM1Q05193 864 aaKnown RBP6.92□□□□□ -1.3
IFT20-205ENST00000578009 CPSF6Q16630 551 aaKnown RBP eCLIP6.92□□□□□ -1.3
IFT20-205ENST00000578009 C8orf34Q49A92 452 aa6.92□□□□□ -1.3
IFT20-205ENST00000578009 CBLL1Q75N03 491 aa6.92□□□□□ -1.3
IFT20-205ENST00000578009 BSNDQ8WZ55 320 aa6.92□□□□□ -1.3
IFT20-205ENST00000578009 TBC1D32Q96NH3 1257 aa6.92□□□□□ -1.3
IFT20-205ENST00000578009 RRP7BPQ9NSQ0 103 aa6.92□□□□□ -1.3
IFT20-205ENST00000578009 GCC2Q8IWJ2 1684 aa6.92□□□□□ -1.3
IFT20-205ENST00000578009 ZNF644Q9H582 1327 aaPredicted RBP6.92□□□□□ -1.3
IFT20-205ENST00000578009 SHANK2Q9UPX8 1470 aa6.92□□□□□ -1.3
IFT20-205ENST00000578009 KDM5BQ9UGL1 1544 aa6.91□□□□□ -1.3
IFT20-205ENST00000578009 LOC100289279A0A1B0GTE1 492 aa6.91□□□□□ -1.3
IFT20-205ENST00000578009 A6NHS1 94 aa6.91□□□□□ -1.3
IFT20-205ENST00000578009 DLGAP3O95886 979 aa6.91□□□□□ -1.3
IFT20-205ENST00000578009 C8AP07357 584 aa6.91□□□□□ -1.3
IFT20-205ENST00000578009 TMEM164Q5U3C3 297 aa6.91□□□□□ -1.3
IFT20-205ENST00000578009 CDPF1Q6NVV7 123 aa6.91□□□□□ -1.3
IFT20-205ENST00000578009 VN1R5Q7Z5H4 357 aa6.91□□□□□ -1.3
IFT20-205ENST00000578009 TMEM102Q8N9M5 508 aaPredicted RBP6.91□□□□□ -1.3
IFT20-205ENST00000578009 OSMRQ99650 979 aa6.91□□□□□ -1.3
IFT20-205ENST00000578009 GGNBP2Q9H3C7 697 aa6.91□□□□□ -1.3
IFT20-205ENST00000578009 SUGCTQ9HAC7 445 aa6.91□□□□□ -1.3
IFT20-205ENST00000578009 BSDC1Q9NW68 430 aaPredicted RBP6.91□□□□□ -1.3
IFT20-205ENST00000578009 SEPT3Q9UH03 358 aa6.91□□□□□ -1.3
IFT20-205ENST00000578009 ANKRD30AQ9BXX3 1397 aa6.91□□□□□ -1.3
IFT20-205ENST00000578009 ADMP35318 185 aa6.9□□□□□ -1.3
IFT20-205ENST00000578009 XKR5Q6UX68 686 aa6.9□□□□□ -1.3
IFT20-205ENST00000578009 NFXL1Q6ZNB6 911 aa6.9□□□□□ -1.3
IFT20-205ENST00000578009 FLCNQ8NFG4 579 aa6.9□□□□□ -1.3
IFT20-205ENST00000578009 PMEPA1Q969W9 287 aa6.9□□□□□ -1.3
IFT20-205ENST00000578009 NXPE3Q969Y0 559 aa6.9□□□□□ -1.3
IFT20-205ENST00000578009 SIN3AQ96ST3 1273 aa6.9□□□□□ -1.3
IFT20-205ENST00000578009 MPHOSPH9Q99550 1183 aa6.9□□□□□ -1.3
IFT20-205ENST00000578009 KIAA1107Q9UPP5 1409 aa6.9□□□□□ -1.31
IFT20-205ENST00000578009 PLEKHH2Q8IVE3 1493 aa6.9□□□□□ -1.31
IFT20-205ENST00000578009 ARHGEF5Q12774 1597 aa6.9□□□□□ -1.31
IFT20-205ENST00000578009 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.89□□□□□ -1.31
IFT20-205ENST00000578009 TSPY4P0CV99 314 aa6.89□□□□□ -1.31
IFT20-205ENST00000578009 TSPY10P0CW01 314 aa6.89□□□□□ -1.31
IFT20-205ENST00000578009 EXOSC6Q5RKV6 272 aaKnown RBP6.89□□□□□ -1.31
IFT20-205ENST00000578009 POU5F2Q8N7G0 328 aa6.89□□□□□ -1.31
IFT20-205ENST00000578009 ASAP3Q8TDY4 903 aa6.89□□□□□ -1.31
IFT20-205ENST00000578009 CLP1Q92989 425 aaKnown RBP6.89□□□□□ -1.31
IFT20-205ENST00000578009 ZKSCAN3Q9BRR0 538 aa6.89□□□□□ -1.31
IFT20-205ENST00000578009 YIPF2Q9BWQ6 316 aa6.89□□□□□ -1.31
IFT20-205ENST00000578009 CHRDQ9H2X0 955 aa6.89□□□□□ -1.31
IFT20-205ENST00000578009 ERCC6L2Q5T890 1561 aa6.88□□□□□ -1.31
IFT20-205ENST00000578009 MBD5Q9P267 1494 aa6.88□□□□□ -1.31
IFT20-205ENST00000578009 FAM170BA6NMN3 283 aa6.88□□□□□ -1.31
IFT20-205ENST00000578009 PDGFAP04085 211 aa6.88□□□□□ -1.31
IFT20-205ENST00000578009 JUNBP17275 347 aaPredicted RBP6.88□□□□□ -1.31
IFT20-205ENST00000578009 ITGB5P18084 799 aa6.88□□□□□ -1.31
IFT20-205ENST00000578009 GSTM4Q03013 218 aa6.88□□□□□ -1.31
IFT20-205ENST00000578009 COL19A1Q14993 1142 aa6.88□□□□□ -1.31
IFT20-205ENST00000578009 ZAR1Q86SH2 424 aa6.88□□□□□ -1.31
IFT20-205ENST00000578009 C2CD4AQ8NCU7 369 aaPredicted RBP6.88□□□□□ -1.31
IFT20-205ENST00000578009 LRRC4CQ9HCJ2 640 aa6.88□□□□□ -1.31
IFT20-205ENST00000578009 PRKAG2Q9UGJ0 569 aa6.88□□□□□ -1.31
IFT20-205ENST00000578009 PLCH2O75038 1416 aa6.87□□□□□ -1.31
IFT20-205ENST00000578009 TONSLQ96HA7 1378 aa6.87□□□□□ -1.31
IFT20-205ENST00000578009 EREGO14944 169 aa6.87□□□□□ -1.31
IFT20-205ENST00000578009 ATG7O95352 703 aa6.87□□□□□ -1.31
IFT20-205ENST00000578009 SOX4Q06945 474 aaPredicted RBP6.87□□□□□ -1.31
IFT20-205ENST00000578009 EFCAB2Q5VUJ9 269 aa6.87□□□□□ -1.31
IFT20-205ENST00000578009 DUSP27Q5VZP5 1158 aa6.87□□□□□ -1.31
IFT20-205ENST00000578009 AGBL5Q8NDL9 886 aa6.87□□□□□ -1.31
IFT20-205ENST00000578009 CDC42BPAQ5VT25 1732 aa6.87□□□□□ -1.31
IFT20-205ENST00000578009 ARAP3Q8WWN8 1544 aa6.86□□□□□ -1.31
IFT20-205ENST00000578009 DENND4BO75064 1496 aaPredicted RBP6.86□□□□□ -1.31
IFT20-205ENST00000578009 C9orf84Q5VXU9 1444 aa6.86□□□□□ -1.31
IFT20-205ENST00000578009 ANKRD50Q9ULJ7 1429 aa6.86□□□□□ -1.31
IFT20-205ENST00000578009 ANKRD30BQ9BXX2 1392 aa6.86□□□□□ -1.31
IFT20-205ENST00000578009 ATP2B4P23634 1241 aa6.86□□□□□ -1.31
IFT20-205ENST00000578009 NOM1Q5C9Z4 860 aaKnown RBP6.86□□□□□ -1.31
IFT20-205ENST00000578009 SOX17Q9H6I2 414 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms