RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 USP44Q9H0E7 712 aa17.72■□□□□ 0.43
SMARCD2-205ENST00000577686 SEMA3EO15041 775 aa17.71■□□□□ 0.43
SMARCD2-205ENST00000577686 UBTFL1P0CB47 393 aaPredicted RBP17.71■□□□□ 0.43
SMARCD2-205ENST00000577686 HOXD10P28358 340 aa17.71■□□□□ 0.43
SMARCD2-205ENST00000577686 SSH1Q8WYL5 1049 aa17.71■□□□□ 0.43
SMARCD2-205ENST00000577686 SMC4Q9NTJ3 1288 aa17.71■□□□□ 0.43
SMARCD2-205ENST00000577686 CEP126Q9P2H0 1117 aa17.71■□□□□ 0.43
SMARCD2-205ENST00000577686 PTCH2Q9Y6C5 1203 aa17.71■□□□□ 0.43
SMARCD2-205ENST00000577686 RBBP6Q7Z6E9 1792 aaKnown RBP17.71■□□□□ 0.43
SMARCD2-205ENST00000577686 BTBD19C9JJ37 291 aa17.7■□□□□ 0.42
SMARCD2-205ENST00000577686 IRF6O14896 467 aa17.7■□□□□ 0.42
SMARCD2-205ENST00000577686 CIAO1O76071 339 aa17.7■□□□□ 0.42
SMARCD2-205ENST00000577686 LDHBP07195 334 aaKnown RBP17.7■□□□□ 0.42
SMARCD2-205ENST00000577686 LACTBP83111 547 aaPredicted RBP17.7■□□□□ 0.42
SMARCD2-205ENST00000577686 ATP2B3Q16720 1220 aa17.7■□□□□ 0.42
SMARCD2-205ENST00000577686 KLHDC4Q8TBB5 520 aa17.7■□□□□ 0.42
SMARCD2-205ENST00000577686 ZKSCAN4Q969J2 545 aaPredicted RBP17.7■□□□□ 0.42
SMARCD2-205ENST00000577686 DENND2AQ9ULE3 1009 aa17.7■□□□□ 0.42
SMARCD2-205ENST00000577686 CT47B1P0C2W7 299 aaPredicted RBP17.69■□□□□ 0.42
SMARCD2-205ENST00000577686 ANKRD23Q86SG2 305 aa17.69■□□□□ 0.42
SMARCD2-205ENST00000577686 SLF2Q8IX21 1173 aa17.69■□□□□ 0.42
SMARCD2-205ENST00000577686 EN2P19622 333 aaPredicted RBP17.68■□□□□ 0.42
SMARCD2-205ENST00000577686 API5Q9BZZ5 524 aaKnown RBP17.68■□□□□ 0.42
SMARCD2-205ENST00000577686 IL15P40933 162 aaPredicted RBP17.67■□□□□ 0.42
SMARCD2-205ENST00000577686 MIGA2Q7L4E1 593 aa17.67■□□□□ 0.42
SMARCD2-205ENST00000577686 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.67■□□□□ 0.42
SMARCD2-205ENST00000577686 PARK7Q99497 189 aaKnown RBP17.67■□□□□ 0.42
SMARCD2-205ENST00000577686 DAGLAQ9Y4D2 1042 aa17.67■□□□□ 0.42
SMARCD2-205ENST00000577686 SALL1Q9NSC2 1324 aa17.67■□□□□ 0.42
SMARCD2-205ENST00000577686 INPP5BP32019 993 aa17.66■□□□□ 0.42
SMARCD2-205ENST00000577686 RFX5P48382 616 aaPredicted RBP17.66■□□□□ 0.42
SMARCD2-205ENST00000577686 SLFN5Q08AF3 891 aa17.66■□□□□ 0.42
SMARCD2-205ENST00000577686 TCP10Q12799 353 aa17.66■□□□□ 0.42
SMARCD2-205ENST00000577686 HABP4Q5JVS0 413 aaKnown RBP17.66■□□□□ 0.42
SMARCD2-205ENST00000577686 NOL9Q5SY16 702 aaKnown RBP17.66■□□□□ 0.42
SMARCD2-205ENST00000577686 CDC42EP5Q6NZY7 148 aa17.66■□□□□ 0.42
SMARCD2-205ENST00000577686 NKX2-3Q8TAU0 364 aa17.66■□□□□ 0.42
SMARCD2-205ENST00000577686 SIL1Q9H173 461 aa17.66■□□□□ 0.42
SMARCD2-205ENST00000577686 USP40Q9NVE5 1235 aa17.66■□□□□ 0.42
SMARCD2-205ENST00000577686 PDHXO00330 501 aa17.65■□□□□ 0.42
SMARCD2-205ENST00000577686 SPTY2D1Q68D10 685 aaPredicted RBP17.65■□□□□ 0.42
SMARCD2-205ENST00000577686 DZIP1Q86YF9 867 aaKnown RBP17.65■□□□□ 0.42
SMARCD2-205ENST00000577686 RAET1EQ8TD07 263 aa17.65■□□□□ 0.42
SMARCD2-205ENST00000577686 PICK1Q9NRD5 415 aa17.65■□□□□ 0.42
SMARCD2-205ENST00000577686 ZNF112Q9UJU3 913 aa17.65■□□□□ 0.42
SMARCD2-205ENST00000577686 KCNH4Q9UQ05 1017 aa17.65■□□□□ 0.42
SMARCD2-205ENST00000577686 CXCL11O14625 94 aa17.64■□□□□ 0.41
SMARCD2-205ENST00000577686 ZBTB22O15209 634 aa17.64■□□□□ 0.41
SMARCD2-205ENST00000577686 ENTPD3O75355 529 aa17.64■□□□□ 0.41
SMARCD2-205ENST00000577686 FMNL1O95466 1100 aaPredicted RBP17.64■□□□□ 0.41
SMARCD2-205ENST00000577686 PRDX5P30044 214 aa17.64■□□□□ 0.41
SMARCD2-205ENST00000577686 DIXDC1Q155Q3 683 aa17.64■□□□□ 0.41
SMARCD2-205ENST00000577686 C17orf99Q6UX52 265 aa17.64■□□□□ 0.41
SMARCD2-205ENST00000577686 FASTKD5Q7L8L6 764 aaKnown RBP17.64■□□□□ 0.41
SMARCD2-205ENST00000577686 ATG9AQ7Z3C6 839 aa17.64■□□□□ 0.41
SMARCD2-205ENST00000577686 PSMC4P43686 418 aa17.63■□□□□ 0.41
SMARCD2-205ENST00000577686 ZSCAN29Q8IWY8 852 aaPredicted RBP17.63■□□□□ 0.41
SMARCD2-205ENST00000577686 SH3TC2Q8TF17 1288 aa17.63■□□□□ 0.41
SMARCD2-205ENST00000577686 TRIM47Q96LD4 638 aa17.63■□□□□ 0.41
SMARCD2-205ENST00000577686 SRRDQ9UH36 339 aa17.63■□□□□ 0.41
SMARCD2-205ENST00000577686 CPA4Q9UI42 421 aa17.63■□□□□ 0.41
SMARCD2-205ENST00000577686 AKAP2Q9Y2D5 859 aa17.63■□□□□ 0.41
SMARCD2-205ENST00000577686 MYH13Q9UKX3 1938 aa17.62■□□□□ 0.41
SMARCD2-205ENST00000577686 FCGRTP55899 365 aa17.62■□□□□ 0.41
SMARCD2-205ENST00000577686 UBXN2AP68543 259 aa17.62■□□□□ 0.41
SMARCD2-205ENST00000577686 ARHGAP39Q9C0H5 1083 aa17.62■□□□□ 0.41
SMARCD2-205ENST00000577686 LRRFIP2Q9Y608 721 aaKnown RBP17.62■□□□□ 0.41
SMARCD2-205ENST00000577686 PDS5AQ29RF7 1337 aaKnown RBP17.62■□□□□ 0.41
SMARCD2-205ENST00000577686 MYCP01106 439 aaPredicted RBP17.61■□□□□ 0.41
SMARCD2-205ENST00000577686 CAP1Q01518 475 aa17.61■□□□□ 0.41
SMARCD2-205ENST00000577686 NFIAQ12857 509 aa17.61■□□□□ 0.41
SMARCD2-205ENST00000577686 MVPQ14764 893 aaKnown RBP17.61■□□□□ 0.41
SMARCD2-205ENST00000577686 SCYL3Q8IZE3 742 aa17.61■□□□□ 0.41
SMARCD2-205ENST00000577686 IDI2Q9BXS1 227 aa17.61■□□□□ 0.41
SMARCD2-205ENST00000577686 BIN2Q9UBW5 565 aaPredicted RBP17.61■□□□□ 0.41
SMARCD2-205ENST00000577686 MYPNQ86TC9 1320 aa17.61■□□□□ 0.41
SMARCD2-205ENST00000577686 GNAI3P08754 354 aa17.6■□□□□ 0.41
SMARCD2-205ENST00000577686 CAPN2P17655 700 aa17.6■□□□□ 0.41
SMARCD2-205ENST00000577686 GRK4P32298 578 aa17.6■□□□□ 0.41
SMARCD2-205ENST00000577686 RGS3P49796 1198 aa17.6■□□□□ 0.41
SMARCD2-205ENST00000577686 COPRSQ9NQ92 184 aa17.6■□□□□ 0.41
SMARCD2-205ENST00000577686 FAM198AQ9UFP1 575 aa17.6■□□□□ 0.41
SMARCD2-205ENST00000577686 ABCF2Q9UG63 623 aa17.6■□□□□ 0.41
SMARCD2-205ENST00000577686 GAKO14976 1311 aa17.59■□□□□ 0.41
SMARCD2-205ENST00000577686 OSBPP22059 807 aa17.59■□□□□ 0.41
SMARCD2-205ENST00000577686 PHKA1P46020 1223 aa17.59■□□□□ 0.41
SMARCD2-205ENST00000577686 CCDC102BQ68D86 513 aa17.59■□□□□ 0.41
SMARCD2-205ENST00000577686 SLAIN1Q8ND83 568 aa17.59■□□□□ 0.41
SMARCD2-205ENST00000577686 HTATIP2Q9BUP3 242 aa17.59■□□□□ 0.41
SMARCD2-205ENST00000577686 NOB1Q9ULX3 412 aaKnown RBP17.59■□□□□ 0.41
SMARCD2-205ENST00000577686 SLC45A1Q9Y2W3 748 aa17.59■□□□□ 0.41
SMARCD2-205ENST00000577686 ADGRA2Q96PE1 1338 aa17.58■□□□□ 0.4
SMARCD2-205ENST00000577686 MAP4K4O95819 1239 aaPredicted RBP17.58■□□□□ 0.4
SMARCD2-205ENST00000577686 GSTO1P78417 241 aa17.58■□□□□ 0.4
SMARCD2-205ENST00000577686 ZHX2Q9Y6X8 837 aa17.58■□□□□ 0.4
SMARCD2-205ENST00000577686 A0A0G2JLL6 359 aaPredicted RBP17.57■□□□□ 0.4
SMARCD2-205ENST00000577686 CTNND1O60716 968 aaKnown RBP17.57■□□□□ 0.4
SMARCD2-205ENST00000577686 LDHCP07864 332 aa17.57■□□□□ 0.4
SMARCD2-205ENST00000577686 GORABQ5T7V8 394 aa17.57■□□□□ 0.4
SMARCD2-205ENST00000577686 GADL1Q6ZQY3 521 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms