RNA–Protein interactions for RNA: ENST00000576601.1

CIITA-211, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 4

Gene CIITA, Length 626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-211ENST00000576601 EVI5O60447 810 aa17.5■□□□□ 0.39
CIITA-211ENST00000576601 SGPL1O95470 568 aa17.5■□□□□ 0.39
CIITA-211ENST00000576601 FOXO4P98177 505 aa17.5■□□□□ 0.39
CIITA-211ENST00000576601 EXOSC9Q06265 439 aaKnown RBP17.5■□□□□ 0.39
CIITA-211ENST00000576601 FKBP5Q13451 457 aaPredicted RBP17.5■□□□□ 0.39
CIITA-211ENST00000576601 ANKRD23Q86SG2 305 aa17.5■□□□□ 0.39
CIITA-211ENST00000576601 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.5■□□□□ 0.39
CIITA-211ENST00000576601 GABRQQ9UN88 632 aa17.5■□□□□ 0.39
CIITA-211ENST00000576601 STXBP5LQ9Y2K9 1186 aa17.5■□□□□ 0.39
CIITA-211ENST00000576601 RPAP1Q9BWH6 1393 aaPredicted RBP17.5■□□□□ 0.39
CIITA-211ENST00000576601 PDHXO00330 501 aa17.49■□□□□ 0.39
CIITA-211ENST00000576601 FMNL1O95466 1100 aaPredicted RBP17.49■□□□□ 0.39
CIITA-211ENST00000576601 BCRP11274 1271 aa17.49■□□□□ 0.39
CIITA-211ENST00000576601 TNNI2P48788 182 aa17.49■□□□□ 0.39
CIITA-211ENST00000576601 DEFB123Q8N688 67 aa17.49■□□□□ 0.39
CIITA-211ENST00000576601 CHMP4AQ9BY43 222 aa17.49■□□□□ 0.39
CIITA-211ENST00000576601 PLXNB2O15031 1838 aa17.49■□□□□ 0.39
CIITA-211ENST00000576601 F6X3S4 739 aa17.48■□□□□ 0.39
CIITA-211ENST00000576601 VAMP4O75379 141 aa17.48■□□□□ 0.39
CIITA-211ENST00000576601 HOXD10P28358 340 aa17.48■□□□□ 0.39
CIITA-211ENST00000576601 UBXN2AP68543 259 aa17.48■□□□□ 0.39
CIITA-211ENST00000576601 SLAIN1Q8ND83 568 aa17.48■□□□□ 0.39
CIITA-211ENST00000576601 DNAAF4Q8WXU2 420 aa17.48■□□□□ 0.39
CIITA-211ENST00000576601 KCNH4Q9UQ05 1017 aa17.48■□□□□ 0.39
CIITA-211ENST00000576601 DOCK1Q14185 1865 aa17.48■□□□□ 0.39
CIITA-211ENST00000576601 ANP32CO43423 234 aa17.47■□□□□ 0.39
CIITA-211ENST00000576601 INPP5BP32019 993 aa17.47■□□□□ 0.39
CIITA-211ENST00000576601 BMP8BP34820 402 aa17.47■□□□□ 0.39
CIITA-211ENST00000576601 GYG1P46976 350 aa17.47■□□□□ 0.39
CIITA-211ENST00000576601 PPATQ06203 517 aa17.47■□□□□ 0.39
CIITA-211ENST00000576601 ZNF594Q96JF6 807 aaPredicted RBP17.47■□□□□ 0.39
CIITA-211ENST00000576601 PAK6Q9NQU5 681 aaPredicted RBP17.47■□□□□ 0.39
CIITA-211ENST00000576601 MTMR10Q9NXD2 777 aa17.47■□□□□ 0.39
CIITA-211ENST00000576601 BIN2Q9UBW5 565 aaPredicted RBP17.47■□□□□ 0.39
CIITA-211ENST00000576601 ZNF316A6NFI3 1004 aaPredicted RBP17.46■□□□□ 0.39
CIITA-211ENST00000576601 ELNP15502 786 aa17.46■□□□□ 0.39
CIITA-211ENST00000576601 IFIT5Q13325 482 aaKnown RBP17.46■□□□□ 0.39
CIITA-211ENST00000576601 NCBP3Q53F19 620 aaKnown RBP17.46■□□□□ 0.39
CIITA-211ENST00000576601 FAM83AQ86UY5 434 aa17.46■□□□□ 0.39
CIITA-211ENST00000576601 DIS3LQ8TF46 1054 aaKnown RBP17.46■□□□□ 0.39
CIITA-211ENST00000576601 FAM84BQ96KN1 310 aaPredicted RBP17.46■□□□□ 0.39
CIITA-211ENST00000576601 CRISPLD2Q9H0B8 497 aa17.46■□□□□ 0.39
CIITA-211ENST00000576601 FRMPD3Q5JV73 1810 aa17.46■□□□□ 0.39
CIITA-211ENST00000576601 INHAP05111 366 aa17.45■□□□□ 0.38
CIITA-211ENST00000576601 EPHA10Q5JZY3 1008 aa17.45■□□□□ 0.38
CIITA-211ENST00000576601 WDR63Q8IWG1 891 aa17.45■□□□□ 0.38
CIITA-211ENST00000576601 LINS1Q8NG48 757 aa17.45■□□□□ 0.38
CIITA-211ENST00000576601 DEFB118Q96PH6 123 aa17.45■□□□□ 0.38
CIITA-211ENST00000576601 ADCY3O60266 1144 aa17.44■□□□□ 0.38
CIITA-211ENST00000576601 CYP2C8P10632 490 aa17.44■□□□□ 0.38
CIITA-211ENST00000576601 LRIT3Q3SXY7 679 aa17.44■□□□□ 0.38
CIITA-211ENST00000576601 GPAT2Q6NUI2 795 aa17.44■□□□□ 0.38
CIITA-211ENST00000576601 PAWRQ96IZ0 340 aaKnown RBP17.44■□□□□ 0.38
CIITA-211ENST00000576601 MYH16Q9H6N6 1097 aa17.44■□□□□ 0.38
CIITA-211ENST00000576601 COL2A1P02458 1487 aaPredicted RBP17.44■□□□□ 0.38
CIITA-211ENST00000576601 LOC285556D6RIA3 1793 aa17.43■□□□□ 0.38
CIITA-211ENST00000576601 PLIN1O60240 522 aa17.43■□□□□ 0.38
CIITA-211ENST00000576601 FLT3LGP49771 235 aa17.43■□□□□ 0.38
CIITA-211ENST00000576601 BCAMP50895 628 aa17.43■□□□□ 0.38
CIITA-211ENST00000576601 FCGRTP55899 365 aa17.43■□□□□ 0.38
CIITA-211ENST00000576601 HDLBPQ00341 1268 aaKnown RBP17.43■□□□□ 0.38
CIITA-211ENST00000576601 FKBP1CQ5VVH2 108 aa17.43■□□□□ 0.38
CIITA-211ENST00000576601 APOBEC3HQ6NTF7 200 aaKnown RBP17.43■□□□□ 0.38
CIITA-211ENST00000576601 ZDHHC15Q96MV8 337 aa17.43■□□□□ 0.38
CIITA-211ENST00000576601 ATAD5Q96QE3 1844 aa17.42■□□□□ 0.38
CIITA-211ENST00000576601 HIBADHP31937 336 aaKnown RBP17.42■□□□□ 0.38
CIITA-211ENST00000576601 BEND3Q5T5X7 828 aa17.42■□□□□ 0.38
CIITA-211ENST00000576601 MIGA2Q7L4E1 593 aa17.42■□□□□ 0.38
CIITA-211ENST00000576601 C7orf61Q8IZ16 206 aa17.42■□□□□ 0.38
CIITA-211ENST00000576601 FAM9BQ8IZU0 186 aa17.42■□□□□ 0.38
CIITA-211ENST00000576601 PARK7Q99497 189 aaKnown RBP17.42■□□□□ 0.38
CIITA-211ENST00000576601 ZNF341Q9BYN7 854 aa17.42■□□□□ 0.38
CIITA-211ENST00000576601 ZNF112Q9UJU3 913 aa17.42■□□□□ 0.38
CIITA-211ENST00000576601 ZMYND8Q9ULU4 1186 aaPredicted RBP17.42■□□□□ 0.38
CIITA-211ENST00000576601 CHMP3Q9Y3E7 222 aa17.42■□□□□ 0.38
CIITA-211ENST00000576601 MAST2Q6P0Q8 1798 aa17.42■□□□□ 0.38
CIITA-211ENST00000576601 NCOR1O75376 2440 aa17.42■□□□□ 0.38
CIITA-211ENST00000576601 MYH2Q9UKX2 1941 aa17.41■□□□□ 0.38
CIITA-211ENST00000576601 IRF5Q13568 498 aa17.41■□□□□ 0.38
CIITA-211ENST00000576601 UBE4AQ14139 1066 aa17.41■□□□□ 0.38
CIITA-211ENST00000576601 DCAF15Q66K64 600 aa17.41■□□□□ 0.38
CIITA-211ENST00000576601 LMBR1LQ6UX01 489 aa17.41■□□□□ 0.38
CIITA-211ENST00000576601 LDHAL6AQ6ZMR3 332 aa17.41■□□□□ 0.38
CIITA-211ENST00000576601 PXYLP1Q8TE99 480 aa17.41■□□□□ 0.38
CIITA-211ENST00000576601 TEKT1Q969V4 418 aa17.41■□□□□ 0.38
CIITA-211ENST00000576601 IQSEC3Q9UPP2 1182 aaPredicted RBP17.41■□□□□ 0.38
CIITA-211ENST00000576601 TFRCP02786 760 aaKnown RBP17.4■□□□□ 0.38
CIITA-211ENST00000576601 MAGEA10P43363 369 aaPredicted RBP17.4■□□□□ 0.38
CIITA-211ENST00000576601 NOL9Q5SY16 702 aaKnown RBP17.4■□□□□ 0.38
CIITA-211ENST00000576601 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.4■□□□□ 0.38
CIITA-211ENST00000576601 ATRNL1Q5VV63 1379 aa17.4■□□□□ 0.38
CIITA-211ENST00000576601 ZEB1P37275 1124 aaPredicted RBP17.39■□□□□ 0.37
CIITA-211ENST00000576601 FBXO33Q7Z6M2 555 aa17.39■□□□□ 0.37
CIITA-211ENST00000576601 TDHQ8IZJ6 230 aa17.39■□□□□ 0.37
CIITA-211ENST00000576601 HOOK2Q96ED9 719 aa17.39■□□□□ 0.37
CIITA-211ENST00000576601 PUS3Q9BZE2 481 aaKnown RBP17.39■□□□□ 0.37
CIITA-211ENST00000576601 CNNM1Q9NRU3 951 aa17.39■□□□□ 0.37
CIITA-211ENST00000576601 LTBP2Q14767 1821 aa17.39■□□□□ 0.37
CIITA-211ENST00000576601 REV3LO60673 3130 aa17.38■□□□□ 0.37
CIITA-211ENST00000576601 CAPN2P17655 700 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms