RNA–Protein interactions for RNA: ENST00000575909.1

TOM1L1-222, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-222ENST00000575909 LINC01387J3KSC0 135 aa9.42□□□□□ -0.9
TOM1L1-222ENST00000575909 M0R082 166 aa9.42□□□□□ -0.9
TOM1L1-222ENST00000575909 RPL6Q02878 288 aaKnown RBP9.42□□□□□ -0.9
TOM1L1-222ENST00000575909 WFDC8Q8IUA0 241 aa9.42□□□□□ -0.9
TOM1L1-222ENST00000575909 ZNF417Q8TAU3 575 aa9.42□□□□□ -0.9
TOM1L1-222ENST00000575909 EDARADDQ8WWZ3 215 aa9.42□□□□□ -0.9
TOM1L1-222ENST00000575909 SHDQ96IW2 340 aa9.42□□□□□ -0.9
TOM1L1-222ENST00000575909 ZNF587Q96SQ5 575 aaPredicted RBP9.42□□□□□ -0.9
TOM1L1-222ENST00000575909 PRDM6Q9NQX0 595 aa9.42□□□□□ -0.9
TOM1L1-222ENST00000575909 LRRC4BQ9NT99 713 aa9.42□□□□□ -0.9
TOM1L1-222ENST00000575909 ERBB4Q15303 1308 aa9.41□□□□□ -0.9
TOM1L1-222ENST00000575909 FSCN2O14926 492 aa9.41□□□□□ -0.9
TOM1L1-222ENST00000575909 ADAMTS2O95450 1211 aa9.41□□□□□ -0.9
TOM1L1-222ENST00000575909 IMPDH2P12268 514 aa9.41□□□□□ -0.9
TOM1L1-222ENST00000575909 HNRNPUQ00839 825 aaKnown RBP eCLIP9.41□□□□□ -0.9
TOM1L1-222ENST00000575909 HGSNATQ68CP4 663 aa9.41□□□□□ -0.9
TOM1L1-222ENST00000575909 MSL1Q68DK7 614 aa9.41□□□□□ -0.9
TOM1L1-222ENST00000575909 C1orf229Q6ZS94 237 aaPredicted RBP9.41□□□□□ -0.9
TOM1L1-222ENST00000575909 ANKS3Q6ZW76 656 aa9.41□□□□□ -0.9
TOM1L1-222ENST00000575909 CHSY3Q70JA7 882 aa9.41□□□□□ -0.9
TOM1L1-222ENST00000575909 GALNT6Q8NCL4 622 aa9.41□□□□□ -0.9
TOM1L1-222ENST00000575909 KCNB2Q92953 911 aa9.41□□□□□ -0.9
TOM1L1-222ENST00000575909 IRF7Q92985 503 aa9.41□□□□□ -0.9
TOM1L1-222ENST00000575909 ANAPC16Q96DE5 110 aa9.41□□□□□ -0.9
TOM1L1-222ENST00000575909 CORO1BQ9BR76 489 aa9.41□□□□□ -0.9
TOM1L1-222ENST00000575909 BRMS1Q9HCU9 246 aa9.41□□□□□ -0.9
TOM1L1-222ENST00000575909 KRT82Q9NSB4 513 aa9.41□□□□□ -0.9
TOM1L1-222ENST00000575909 PRKAG3Q9UGI9 489 aa9.41□□□□□ -0.9
TOM1L1-222ENST00000575909 PPT2Q9UMR5 302 aa9.41□□□□□ -0.9
TOM1L1-222ENST00000575909 CADPSQ9ULU8 1353 aa9.4□□□□□ -0.9
TOM1L1-222ENST00000575909 EIF6P56537 245 aaKnown RBP9.4□□□□□ -0.9
TOM1L1-222ENST00000575909 POU4F3Q15319 338 aa9.4□□□□□ -0.9
TOM1L1-222ENST00000575909 NFE2L2Q16236 605 aa9.4□□□□□ -0.9
TOM1L1-222ENST00000575909 TNNI3KQ59H18 835 aa9.4□□□□□ -0.9
TOM1L1-222ENST00000575909 TXNDC11Q6PKC3 985 aa9.4□□□□□ -0.9
TOM1L1-222ENST00000575909 KLHL23Q8NBE8 558 aa9.4□□□□□ -0.9
TOM1L1-222ENST00000575909 FERD3LQ96RJ6 166 aa9.4□□□□□ -0.9
TOM1L1-222ENST00000575909 CRBNQ96SW2 442 aa9.4□□□□□ -0.9
TOM1L1-222ENST00000575909 NRSN2Q9GZP1 204 aa9.4□□□□□ -0.9
TOM1L1-222ENST00000575909 KLF4O43474 513 aa9.39□□□□□ -0.91
TOM1L1-222ENST00000575909 OIP5O43482 229 aa9.39□□□□□ -0.91
TOM1L1-222ENST00000575909 KRT76Q01546 638 aa9.39□□□□□ -0.91
TOM1L1-222ENST00000575909 PTPN11Q06124 597 aaPredicted RBP9.39□□□□□ -0.91
TOM1L1-222ENST00000575909 SERINC3Q13530 473 aa9.39□□□□□ -0.91
TOM1L1-222ENST00000575909 MPRIPQ6WCQ1 1025 aa9.39□□□□□ -0.91
TOM1L1-222ENST00000575909 CCDC81Q6ZN84 652 aa9.39□□□□□ -0.91
TOM1L1-222ENST00000575909 MAP4K3Q8IVH8 894 aa9.39□□□□□ -0.91
TOM1L1-222ENST00000575909 OR6P1Q8NGX9 317 aa9.39□□□□□ -0.91
TOM1L1-222ENST00000575909 MKL1Q969V6 931 aa9.39□□□□□ -0.91
TOM1L1-222ENST00000575909 BTBD6Q96KE9 485 aa9.39□□□□□ -0.91
TOM1L1-222ENST00000575909 SIRPGQ9P1W8 387 aa9.39□□□□□ -0.91
TOM1L1-222ENST00000575909 ZNRF3Q9ULT6 936 aa9.39□□□□□ -0.91
TOM1L1-222ENST00000575909 R3HCC1Q9Y3T6 440 aaKnown RBP9.39□□□□□ -0.91
TOM1L1-222ENST00000575909 GIPRP48546 466 aa9.38□□□□□ -0.91
TOM1L1-222ENST00000575909 ZNF787Q6DD87 383 aa9.38□□□□□ -0.91
TOM1L1-222ENST00000575909 GK5Q6ZS86 529 aa9.38□□□□□ -0.91
TOM1L1-222ENST00000575909 TRIM55Q9BYV6 548 aa9.38□□□□□ -0.91
TOM1L1-222ENST00000575909 PIF1Q9H611 641 aa9.38□□□□□ -0.91
TOM1L1-222ENST00000575909 EHMT1Q9H9B1 1298 aa9.38□□□□□ -0.91
TOM1L1-222ENST00000575909 TMA7Q9Y2S6 64 aaKnown RBP9.38□□□□□ -0.91
TOM1L1-222ENST00000575909 TLDC2A0PJX2 215 aa9.37□□□□□ -0.91
TOM1L1-222ENST00000575909 U2SURPO15042 1029 aaKnown RBP9.37□□□□□ -0.91
TOM1L1-222ENST00000575909 SLURP2P0DP57 97 aa9.37□□□□□ -0.91
TOM1L1-222ENST00000575909 MAOBP27338 520 aa9.37□□□□□ -0.91
TOM1L1-222ENST00000575909 CLCQ05315 142 aa9.37□□□□□ -0.91
TOM1L1-222ENST00000575909 RAB33AQ14088 237 aa9.37□□□□□ -0.91
TOM1L1-222ENST00000575909 SUZ12Q15022 739 aaKnown RBP9.37□□□□□ -0.91
TOM1L1-222ENST00000575909 FBXW10Q5XX13 1052 aa9.37□□□□□ -0.91
TOM1L1-222ENST00000575909 C8orf86Q6ZUL3 223 aa9.37□□□□□ -0.91
TOM1L1-222ENST00000575909 GPBAR1Q8TDU6 330 aa9.37□□□□□ -0.91
TOM1L1-222ENST00000575909 ACSBG1Q96GR2 724 aa9.37□□□□□ -0.91
TOM1L1-222ENST00000575909 ZC3H12CQ9C0D7 883 aaKnown RBP9.37□□□□□ -0.91
TOM1L1-222ENST00000575909 PCDHA4Q9UN74 947 aa9.37□□□□□ -0.91
TOM1L1-222ENST00000575909 SNCAIPQ9Y6H5 919 aa9.37□□□□□ -0.91
TOM1L1-222ENST00000575909 K7ELQ4 463 aaPredicted RBP9.36□□□□□ -0.91
TOM1L1-222ENST00000575909 ATE1O95260 518 aa9.36□□□□□ -0.91
TOM1L1-222ENST00000575909 BCRP11274 1271 aa9.36□□□□□ -0.91
TOM1L1-222ENST00000575909 BMS1Q14692 1282 aaKnown RBP9.36□□□□□ -0.91
TOM1L1-222ENST00000575909 HP1BP3Q5SSJ5 553 aaPredicted RBP9.36□□□□□ -0.91
TOM1L1-222ENST00000575909 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.36□□□□□ -0.91
TOM1L1-222ENST00000575909 RBBP8NLQ8NC74 664 aaPredicted RBP9.36□□□□□ -0.91
TOM1L1-222ENST00000575909 KLHDC7BQ96G42 594 aa9.36□□□□□ -0.91
TOM1L1-222ENST00000575909 CARD10Q9BWT7 1032 aa9.36□□□□□ -0.91
TOM1L1-222ENST00000575909 CCDC86Q9H6F5 360 aaKnown RBP9.36□□□□□ -0.91
TOM1L1-222ENST00000575909 CDK11AQ9UQ88 783 aaPredicted RBP9.36□□□□□ -0.91
TOM1L1-222ENST00000575909 PCDHB14Q9Y5E9 798 aa9.36□□□□□ -0.91
TOM1L1-222ENST00000575909 SMAD7O15105 426 aaKnown RBP9.35□□□□□ -0.91
TOM1L1-222ENST00000575909 SETDB1Q15047 1291 aa9.35□□□□□ -0.91
TOM1L1-222ENST00000575909 DCAF11Q8TEB1 546 aa9.35□□□□□ -0.91
TOM1L1-222ENST00000575909 HNRNPLLQ8WVV9 542 aaKnown RBP9.35□□□□□ -0.91
TOM1L1-222ENST00000575909 MRFAP1L1Q96HT8 127 aa9.35□□□□□ -0.91
TOM1L1-222ENST00000575909 POLR3KQ9Y2Y1 108 aaPredicted RBP9.35□□□□□ -0.91
TOM1L1-222ENST00000575909 PRR36Q9H6K5 1346 aa9.34□□□□□ -0.91
TOM1L1-222ENST00000575909 GFRA2O00451 464 aa9.34□□□□□ -0.91
TOM1L1-222ENST00000575909 TM4SF5O14894 197 aa9.34□□□□□ -0.91
TOM1L1-222ENST00000575909 ECEL1O95672 775 aa9.34□□□□□ -0.91
TOM1L1-222ENST00000575909 ZNF746Q6NUN9 644 aaPredicted RBP9.34□□□□□ -0.91
TOM1L1-222ENST00000575909 ILDR2Q71H61 639 aa9.34□□□□□ -0.91
TOM1L1-222ENST00000575909 HDXQ7Z353 690 aa9.34□□□□□ -0.91
TOM1L1-222ENST00000575909 TACC3Q9Y6A5 838 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms