RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 MRIQ9BWK5 157 aa16.26■□□□□ 0.19
RPAIN-216ENST00000575599 SNRKQ9NRH2 765 aa16.26■□□□□ 0.19
RPAIN-216ENST00000575599 TMOD2Q9NZR1 351 aa16.26■□□□□ 0.19
RPAIN-216ENST00000575599 DAGLAQ9Y4D2 1042 aa16.26■□□□□ 0.19
RPAIN-216ENST00000575599 PPP2R3BQ9Y5P8 575 aa16.26■□□□□ 0.19
RPAIN-216ENST00000575599 PCNTO95613 3336 aa16.25■□□□□ 0.19
RPAIN-216ENST00000575599 FKBP1BP68106 108 aa16.25■□□□□ 0.19
RPAIN-216ENST00000575599 SPTY2D1Q68D10 685 aaPredicted RBP16.25■□□□□ 0.19
RPAIN-216ENST00000575599 TBC1D9Q6ZT07 1266 aa16.25■□□□□ 0.19
RPAIN-216ENST00000575599 ERICH6Q7L0X2 663 aa16.25■□□□□ 0.19
RPAIN-216ENST00000575599 CRBNQ96SW2 442 aa16.25■□□□□ 0.19
RPAIN-216ENST00000575599 THSD7BQ9C0I4 1608 aa16.24■□□□□ 0.19
RPAIN-216ENST00000575599 MYH2Q9UKX2 1941 aa16.24■□□□□ 0.19
RPAIN-216ENST00000575599 SSC5DA1L4H1 1573 aa16.24■□□□□ 0.19
RPAIN-216ENST00000575599 AOC2O75106 756 aa16.24■□□□□ 0.19
RPAIN-216ENST00000575599 HSPA1AP0DMV8 641 aaKnown RBP16.24■□□□□ 0.19
RPAIN-216ENST00000575599 HSPA1BP0DMV9 641 aaKnown RBP16.24■□□□□ 0.19
RPAIN-216ENST00000575599 TNNI2P48788 182 aa16.24■□□□□ 0.19
RPAIN-216ENST00000575599 ZNF157P51786 506 aaPredicted RBP16.24■□□□□ 0.19
RPAIN-216ENST00000575599 RGMBQ6NW40 437 aa16.24■□□□□ 0.19
RPAIN-216ENST00000575599 CLASRPQ8N2M8 674 aaKnown RBP16.24■□□□□ 0.19
RPAIN-216ENST00000575599 FZD1Q9UP38 647 aa16.24■□□□□ 0.19
RPAIN-216ENST00000575599 UBE2Q2LH0YL09 131 aa16.23■□□□□ 0.19
RPAIN-216ENST00000575599 RAB11FIP3O75154 756 aa16.23■□□□□ 0.19
RPAIN-216ENST00000575599 NBPF12Q5TAG4 269 aaPredicted RBP16.23■□□□□ 0.19
RPAIN-216ENST00000575599 TMEM39BQ9GZU3 492 aa16.23■□□□□ 0.19
RPAIN-216ENST00000575599 RAI14Q9P0K7 980 aa16.23■□□□□ 0.19
RPAIN-216ENST00000575599 AKAP11Q9UKA4 1901 aa16.22■□□□□ 0.19
RPAIN-216ENST00000575599 MECOMQ03112 1051 aa16.22■□□□□ 0.19
RPAIN-216ENST00000575599 SUPT20HL1Q3ZLR7 823 aa16.22■□□□□ 0.19
RPAIN-216ENST00000575599 ARMC9Q7Z3E5 817 aa16.22■□□□□ 0.19
RPAIN-216ENST00000575599 CDAN1Q8IWY9 1227 aa16.22■□□□□ 0.19
RPAIN-216ENST00000575599 SLF2Q8IX21 1173 aa16.22■□□□□ 0.19
RPAIN-216ENST00000575599 LRP2BPQ9P2M1 347 aa16.22■□□□□ 0.19
RPAIN-216ENST00000575599 ANGEL1Q9UNK9 670 aaKnown RBP16.22■□□□□ 0.19
RPAIN-216ENST00000575599 IFIT2P09913 472 aaKnown RBP16.21■□□□□ 0.19
RPAIN-216ENST00000575599 ZAP70P43403 619 aa16.21■□□□□ 0.19
RPAIN-216ENST00000575599 CDC42EP5Q6NZY7 148 aa16.21■□□□□ 0.19
RPAIN-216ENST00000575599 ZNF512BQ96KM6 892 aaPredicted RBP16.21■□□□□ 0.19
RPAIN-216ENST00000575599 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.21■□□□□ 0.19
RPAIN-216ENST00000575599 MAST2Q6P0Q8 1798 aa16.21■□□□□ 0.18
RPAIN-216ENST00000575599 MROH7-TTC4A0A0A0MT08 1334 aa16.2■□□□□ 0.18
RPAIN-216ENST00000575599 GAKO14976 1311 aa16.2■□□□□ 0.18
RPAIN-216ENST00000575599 NSUN4Q96CB9 384 aaKnown RBP16.2■□□□□ 0.18
RPAIN-216ENST00000575599 USP40Q9NVE5 1235 aa16.2■□□□□ 0.18
RPAIN-216ENST00000575599 PCDHB15Q9Y5E8 787 aa16.2■□□□□ 0.18
RPAIN-216ENST00000575599 NDUFB9Q9Y6M9 179 aa16.2■□□□□ 0.18
RPAIN-216ENST00000575599 FAM155AB1AL88 458 aaPredicted RBP16.19■□□□□ 0.18
RPAIN-216ENST00000575599 PPP1R12BO60237 982 aaPredicted RBP16.19■□□□□ 0.18
RPAIN-216ENST00000575599 CYP2E1P05181 493 aaPredicted RBP16.19■□□□□ 0.18
RPAIN-216ENST00000575599 SLC10A3P09131 477 aa16.19■□□□□ 0.18
RPAIN-216ENST00000575599 BTDP43251 543 aa16.19■□□□□ 0.18
RPAIN-216ENST00000575599 IRX6P78412 446 aaPredicted RBP16.19■□□□□ 0.18
RPAIN-216ENST00000575599 GSTO1P78417 241 aa16.19■□□□□ 0.18
RPAIN-216ENST00000575599 TCP10Q12799 353 aa16.19■□□□□ 0.18
RPAIN-216ENST00000575599 NOGQ13253 232 aa16.19■□□□□ 0.18
RPAIN-216ENST00000575599 RASAL3Q86YV0 1011 aa16.19■□□□□ 0.18
RPAIN-216ENST00000575599 ZNF384Q8TF68 577 aa16.19■□□□□ 0.18
RPAIN-216ENST00000575599 CCDC102AQ96A19 550 aa16.19■□□□□ 0.18
RPAIN-216ENST00000575599 AIDAQ96BJ3 306 aa16.19■□□□□ 0.18
RPAIN-216ENST00000575599 TEPSINQ96N21 525 aa16.19■□□□□ 0.18
RPAIN-216ENST00000575599 LRRCC1Q9C099 1032 aa16.19■□□□□ 0.18
RPAIN-216ENST00000575599 SMARCA5O60264 1052 aaPredicted RBP16.18■□□□□ 0.18
RPAIN-216ENST00000575599 ATXN8OSP0DMR3 200 aa16.18■□□□□ 0.18
RPAIN-216ENST00000575599 MAP2K2P36507 400 aa16.18■□□□□ 0.18
RPAIN-216ENST00000575599 MAP2K1Q02750 393 aaPredicted RBP16.18■□□□□ 0.18
RPAIN-216ENST00000575599 NFIAQ12857 509 aa16.18■□□□□ 0.18
RPAIN-216ENST00000575599 FKBP1CQ5VVH2 108 aa16.18■□□□□ 0.18
RPAIN-216ENST00000575599 FAM83AQ86UY5 434 aa16.18■□□□□ 0.18
RPAIN-216ENST00000575599 ZIC5Q96T25 663 aa16.18■□□□□ 0.18
RPAIN-216ENST00000575599 PIH1D3Q9NQM4 214 aaKnown RBP16.18■□□□□ 0.18
RPAIN-216ENST00000575599 MYO5AQ9Y4I1 1855 aaKnown RBP16.17■□□□□ 0.18
RPAIN-216ENST00000575599 NAA16Q6N069 864 aaPredicted RBP16.17■□□□□ 0.18
RPAIN-216ENST00000575599 DCTPP1Q9H773 170 aa16.17■□□□□ 0.18
RPAIN-216ENST00000575599 WBP1LQ9NX94 342 aa16.17■□□□□ 0.18
RPAIN-216ENST00000575599 IDH1O75874 414 aaKnown RBP16.16■□□□□ 0.18
RPAIN-216ENST00000575599 LDHCP07864 332 aa16.16■□□□□ 0.18
RPAIN-216ENST00000575599 IREB2P48200 963 aaKnown RBP16.16■□□□□ 0.18
RPAIN-216ENST00000575599 MKRN3Q13064 507 aaKnown RBP16.16■□□□□ 0.18
RPAIN-216ENST00000575599 FAM163AQ96GL9 167 aaPredicted RBP16.16■□□□□ 0.18
RPAIN-216ENST00000575599 BEGAINQ9BUH8 593 aa16.16■□□□□ 0.18
RPAIN-216ENST00000575599 OTOFQ9HC10 1997 aa16.16■□□□□ 0.18
RPAIN-216ENST00000575599 RPAP1Q9BWH6 1393 aaPredicted RBP16.16■□□□□ 0.18
RPAIN-216ENST00000575599 GPR75-ASB3A0A0A6YYF3 556 aa16.15■□□□□ 0.18
RPAIN-216ENST00000575599 FOXN1O15353 648 aa16.15■□□□□ 0.18
RPAIN-216ENST00000575599 USP2O75604 605 aaPredicted RBP16.15■□□□□ 0.18
RPAIN-216ENST00000575599 CLCN6P51797 869 aa16.15■□□□□ 0.18
RPAIN-216ENST00000575599 KIF23Q02241 960 aaPredicted RBP16.15■□□□□ 0.18
RPAIN-216ENST00000575599 PICALMQ13492 652 aa16.15■□□□□ 0.18
RPAIN-216ENST00000575599 MAP3K11Q16584 847 aa16.15■□□□□ 0.18
RPAIN-216ENST00000575599 LDLRAD1Q5T700 205 aa16.15■□□□□ 0.18
RPAIN-216ENST00000575599 FAM151AQ8WW52 585 aa16.15■□□□□ 0.18
RPAIN-216ENST00000575599 CLMNQ96JQ2 1002 aa16.15■□□□□ 0.18
RPAIN-216ENST00000575599 DNAJC2Q99543 621 aaKnown RBP16.15■□□□□ 0.18
RPAIN-216ENST00000575599 NOL10Q9BSC4 688 aaKnown RBP16.15■□□□□ 0.18
RPAIN-216ENST00000575599 ANTXR1Q9H6X2 564 aa16.15■□□□□ 0.18
RPAIN-216ENST00000575599 FAM198AQ9UFP1 575 aa16.15■□□□□ 0.18
RPAIN-216ENST00000575599 GTF3C3Q9Y5Q9 886 aa16.15■□□□□ 0.18
RPAIN-216ENST00000575599 AK9Q5TCS8 1911 aa16.15■□□□□ 0.18
RPAIN-216ENST00000575599 RGS3P49796 1198 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms