RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 ATP2B3Q16720 1220 aa13.03□□□□□ -0.32
TVP23B-208ENST00000575261 ATG9AQ7Z3C6 839 aa13.03□□□□□ -0.32
TVP23B-208ENST00000575261 ZKSCAN4Q969J2 545 aaPredicted RBP13.03□□□□□ -0.32
TVP23B-208ENST00000575261 ZNF341Q9BYN7 854 aa13.03□□□□□ -0.32
TVP23B-208ENST00000575261 SIL1Q9H173 461 aa13.03□□□□□ -0.32
TVP23B-208ENST00000575261 IRF6O14896 467 aa13.02□□□□□ -0.33
TVP23B-208ENST00000575261 CT47B1P0C2W7 299 aaPredicted RBP13.02□□□□□ -0.33
TVP23B-208ENST00000575261 CAP1Q01518 475 aa13.02□□□□□ -0.33
TVP23B-208ENST00000575261 SLC9C1Q4G0N8 1177 aa13.02□□□□□ -0.33
TVP23B-208ENST00000575261 FAM151AQ8WW52 585 aa13.02□□□□□ -0.33
TVP23B-208ENST00000575261 GNL3LQ9NVN8 582 aaKnown RBP13.02□□□□□ -0.33
TVP23B-208ENST00000575261 PCDH10Q9P2E7 1040 aa13.02□□□□□ -0.33
TVP23B-208ENST00000575261 HDAC5Q9UQL6 1122 aa13.02□□□□□ -0.33
TVP23B-208ENST00000575261 DAGLAQ9Y4D2 1042 aa13.02□□□□□ -0.33
TVP23B-208ENST00000575261 BTBD19C9JJ37 291 aa13.01□□□□□ -0.33
TVP23B-208ENST00000575261 TLR2O60603 784 aa13.01□□□□□ -0.33
TVP23B-208ENST00000575261 LDHBP07195 334 aaKnown RBP13.01□□□□□ -0.33
TVP23B-208ENST00000575261 PRDX5P30044 214 aa13.01□□□□□ -0.33
TVP23B-208ENST00000575261 PPATQ06203 517 aa13.01□□□□□ -0.33
TVP23B-208ENST00000575261 KIF22Q14807 665 aa13.01□□□□□ -0.33
TVP23B-208ENST00000575261 DIXDC1Q155Q3 683 aa13.01□□□□□ -0.33
TVP23B-208ENST00000575261 GCC1Q96CN9 775 aa13.01□□□□□ -0.33
TVP23B-208ENST00000575261 CDCA7LQ96GN5 454 aa13.01□□□□□ -0.33
TVP23B-208ENST00000575261 ZNF333Q96JL9 665 aa13.01□□□□□ -0.33
TVP23B-208ENST00000575261 CEP126Q9P2H0 1117 aa13.01□□□□□ -0.33
TVP23B-208ENST00000575261 PTCH2Q9Y6C5 1203 aa13.01□□□□□ -0.33
TVP23B-208ENST00000575261 DOCK2Q92608 1830 aa13.01□□□□□ -0.33
TVP23B-208ENST00000575261 AK9Q5TCS8 1911 aa13□□□□□ -0.33
TVP23B-208ENST00000575261 ZSWIM8A7E2V4 1837 aa13□□□□□ -0.33
TVP23B-208ENST00000575261 SALL1Q9NSC2 1324 aa13□□□□□ -0.33
TVP23B-208ENST00000575261 SEMA3EO15041 775 aa13□□□□□ -0.33
TVP23B-208ENST00000575261 INPP5BP32019 993 aa13□□□□□ -0.33
TVP23B-208ENST00000575261 IL15P40933 162 aaPredicted RBP13□□□□□ -0.33
TVP23B-208ENST00000575261 TCP10Q12799 353 aa13□□□□□ -0.33
TVP23B-208ENST00000575261 CDC42EP5Q6NZY7 148 aa13□□□□□ -0.33
TVP23B-208ENST00000575261 MIGA2Q7L4E1 593 aa13□□□□□ -0.33
TVP23B-208ENST00000575261 NBPF11Q86T75 865 aa13□□□□□ -0.33
TVP23B-208ENST00000575261 TRMT2AQ8IZ69 625 aaKnown RBP13□□□□□ -0.33
TVP23B-208ENST00000575261 ZGPATQ8N5A5 531 aaKnown RBP13□□□□□ -0.33
TVP23B-208ENST00000575261 TMEM106CQ9BVX2 250 aa13□□□□□ -0.33
TVP23B-208ENST00000575261 API5Q9BZZ5 524 aaKnown RBP13□□□□□ -0.33
TVP23B-208ENST00000575261 DENND2AQ9ULE3 1009 aa13□□□□□ -0.33
TVP23B-208ENST00000575261 LACTBP83111 547 aaPredicted RBP12.99□□□□□ -0.33
TVP23B-208ENST00000575261 NFIAQ12857 509 aa12.99□□□□□ -0.33
TVP23B-208ENST00000575261 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.99□□□□□ -0.33
TVP23B-208ENST00000575261 NOB1Q9ULX3 412 aaKnown RBP12.99□□□□□ -0.33
TVP23B-208ENST00000575261 LRRFIP2Q9Y608 721 aaKnown RBP12.99□□□□□ -0.33
TVP23B-208ENST00000575261 MYH2Q9UKX2 1941 aa12.98□□□□□ -0.33
TVP23B-208ENST00000575261 ZBTB22O15209 634 aa12.98□□□□□ -0.33
TVP23B-208ENST00000575261 GNRH1P01148 92 aa12.98□□□□□ -0.33
TVP23B-208ENST00000575261 EN2P19622 333 aaPredicted RBP12.98□□□□□ -0.33
TVP23B-208ENST00000575261 PHKA1P46020 1223 aa12.98□□□□□ -0.33
TVP23B-208ENST00000575261 COPRSQ9NQ92 184 aa12.98□□□□□ -0.33
TVP23B-208ENST00000575261 FAM198AQ9UFP1 575 aa12.98□□□□□ -0.33
TVP23B-208ENST00000575261 ZNF112Q9UJU3 913 aa12.98□□□□□ -0.33
TVP23B-208ENST00000575261 KCNH4Q9UQ05 1017 aa12.98□□□□□ -0.33
TVP23B-208ENST00000575261 PA2G4Q9UQ80 394 aaKnown RBP12.98□□□□□ -0.33
TVP23B-208ENST00000575261 RFX7Q2KHR2 1363 aa12.97□□□□□ -0.33
TVP23B-208ENST00000575261 PDS5AQ29RF7 1337 aaKnown RBP12.97□□□□□ -0.33
TVP23B-208ENST00000575261 PRMT2P55345 433 aa12.97□□□□□ -0.33
TVP23B-208ENST00000575261 NOL9Q5SY16 702 aaKnown RBP12.97□□□□□ -0.33
TVP23B-208ENST00000575261 CCDC102BQ68D86 513 aa12.97□□□□□ -0.33
TVP23B-208ENST00000575261 ANKRD23Q86SG2 305 aa12.97□□□□□ -0.33
TVP23B-208ENST00000575261 DZIP1Q86YF9 867 aaKnown RBP12.97□□□□□ -0.33
TVP23B-208ENST00000575261 MEIS3Q99687 375 aa12.97□□□□□ -0.33
TVP23B-208ENST00000575261 ARHGAP39Q9C0H5 1083 aa12.97□□□□□ -0.33
TVP23B-208ENST00000575261 USP40Q9NVE5 1235 aa12.97□□□□□ -0.33
TVP23B-208ENST00000575261 ATRNL1Q5VV63 1379 aa12.96□□□□□ -0.33
TVP23B-208ENST00000575261 GAKO14976 1311 aa12.96□□□□□ -0.33
TVP23B-208ENST00000575261 PDHXO00330 501 aa12.96□□□□□ -0.33
TVP23B-208ENST00000575261 ADORA1P30542 326 aa12.96□□□□□ -0.33
TVP23B-208ENST00000575261 SLC4A8Q2Y0W8 1093 aa12.96□□□□□ -0.33
TVP23B-208ENST00000575261 C17orf99Q6UX52 265 aa12.96□□□□□ -0.33
TVP23B-208ENST00000575261 PARK7Q99497 189 aaKnown RBP12.96□□□□□ -0.33
TVP23B-208ENST00000575261 ADGRA2Q96PE1 1338 aa12.95□□□□□ -0.34
TVP23B-208ENST00000575261 ENTPD3O75355 529 aa12.95□□□□□ -0.34
TVP23B-208ENST00000575261 GNAI3P08754 354 aa12.95□□□□□ -0.34
TVP23B-208ENST00000575261 RGS3P49796 1198 aa12.95□□□□□ -0.34
TVP23B-208ENST00000575261 RASGRF1Q13972 1273 aa12.95□□□□□ -0.34
TVP23B-208ENST00000575261 SLF2Q8IX21 1173 aa12.95□□□□□ -0.34
TVP23B-208ENST00000575261 SH3TC2Q8TF17 1288 aa12.95□□□□□ -0.34
TVP23B-208ENST00000575261 IDI2Q9BXS1 227 aa12.95□□□□□ -0.34
TVP23B-208ENST00000575261 CPA4Q9UI42 421 aa12.95□□□□□ -0.34
TVP23B-208ENST00000575261 DOCK1Q14185 1865 aa12.95□□□□□ -0.34
TVP23B-208ENST00000575261 A0A1B0GUL7 405 aa12.94□□□□□ -0.34
TVP23B-208ENST00000575261 CXCL11O14625 94 aa12.94□□□□□ -0.34
TVP23B-208ENST00000575261 SRGAP3O43295 1099 aa12.94□□□□□ -0.34
TVP23B-208ENST00000575261 MYCP01106 439 aaPredicted RBP12.94□□□□□ -0.34
TVP23B-208ENST00000575261 RARSP54136 660 aaKnown RBP12.94□□□□□ -0.34
TVP23B-208ENST00000575261 MVPQ14764 893 aaKnown RBP12.94□□□□□ -0.34
TVP23B-208ENST00000575261 SPTY2D1Q68D10 685 aaPredicted RBP12.94□□□□□ -0.34
TVP23B-208ENST00000575261 ZSCAN29Q8IWY8 852 aaPredicted RBP12.94□□□□□ -0.34
TVP23B-208ENST00000575261 ZFPM1Q8IX07 1006 aa12.94□□□□□ -0.34
TVP23B-208ENST00000575261 SCYL3Q8IZE3 742 aa12.94□□□□□ -0.34
TVP23B-208ENST00000575261 ARHGAP45Q92619 1136 aa12.94□□□□□ -0.34
TVP23B-208ENST00000575261 PICK1Q9NRD5 415 aa12.94□□□□□ -0.34
TVP23B-208ENST00000575261 ABCF2Q9UG63 623 aa12.94□□□□□ -0.34
TVP23B-208ENST00000575261 AKAP2Q9Y2D5 859 aa12.94□□□□□ -0.34
TVP23B-208ENST00000575261 MROH7-TTC4A0A0A0MT08 1334 aa12.93□□□□□ -0.34
TVP23B-208ENST00000575261 HOXD10P28358 340 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms