RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 GSTO1P78417 241 aa25.31■■□□□ 1.64
HCFC1R1-208ENST00000575214 FKBP1CQ5VVH2 108 aa25.31■■□□□ 1.64
HCFC1R1-208ENST00000575214 USP40Q9NVE5 1235 aa25.31■■□□□ 1.64
HCFC1R1-208ENST00000575214 FZD1Q9UP38 647 aa25.31■■□□□ 1.64
HCFC1R1-208ENST00000575214 MROH7-TTC4A0A0A0MT08 1334 aa25.31■■□□□ 1.64
HCFC1R1-208ENST00000575214 SSC5DA1L4H1 1573 aa25.31■■□□□ 1.64
HCFC1R1-208ENST00000575214 CYP2E1P05181 493 aaPredicted RBP25.31■■□□□ 1.64
HCFC1R1-208ENST00000575214 CCDC102AQ96A19 550 aa25.31■■□□□ 1.64
HCFC1R1-208ENST00000575214 NSUN4Q96CB9 384 aaKnown RBP25.31■■□□□ 1.64
HCFC1R1-208ENST00000575214 FAM163AQ96GL9 167 aaPredicted RBP25.31■■□□□ 1.64
HCFC1R1-208ENST00000575214 MAP2K2P36507 400 aa25.3■■□□□ 1.64
HCFC1R1-208ENST00000575214 BTDP43251 543 aa25.3■■□□□ 1.64
HCFC1R1-208ENST00000575214 NOGQ13253 232 aa25.3■■□□□ 1.64
HCFC1R1-208ENST00000575214 FAM83AQ86UY5 434 aa25.3■■□□□ 1.64
HCFC1R1-208ENST00000575214 CDAN1Q8IWY9 1227 aa25.3■■□□□ 1.64
HCFC1R1-208ENST00000575214 TEPSINQ96N21 525 aa25.3■■□□□ 1.64
HCFC1R1-208ENST00000575214 DCTPP1Q9H773 170 aa25.3■■□□□ 1.64
HCFC1R1-208ENST00000575214 SUPT16HQ9Y5B9 1047 aaKnown RBP25.3■■□□□ 1.64
HCFC1R1-208ENST00000575214 LDHCP07864 332 aa25.29■■□□□ 1.64
HCFC1R1-208ENST00000575214 ZNF384Q8TF68 577 aa25.29■■□□□ 1.64
HCFC1R1-208ENST00000575214 FAM155AB1AL88 458 aaPredicted RBP25.28■■□□□ 1.64
HCFC1R1-208ENST00000575214 SMARCA5O60264 1052 aaPredicted RBP25.28■■□□□ 1.64
HCFC1R1-208ENST00000575214 SLC10A3P09131 477 aa25.28■■□□□ 1.64
HCFC1R1-208ENST00000575214 MAP2K1Q02750 393 aaPredicted RBP25.28■■□□□ 1.64
HCFC1R1-208ENST00000575214 PIH1D3Q9NQM4 214 aaKnown RBP25.28■■□□□ 1.64
HCFC1R1-208ENST00000575214 NDUFB9Q9Y6M9 179 aa25.28■■□□□ 1.64
HCFC1R1-208ENST00000575214 THSD7BQ9C0I4 1608 aa25.28■■□□□ 1.64
HCFC1R1-208ENST00000575214 MYH2Q9UKX2 1941 aa25.27■■□□□ 1.64
HCFC1R1-208ENST00000575214 TCP10Q12799 353 aa25.27■■□□□ 1.64
HCFC1R1-208ENST00000575214 NFIAQ12857 509 aa25.27■■□□□ 1.64
HCFC1R1-208ENST00000575214 NAA16Q6N069 864 aaPredicted RBP25.27■■□□□ 1.64
HCFC1R1-208ENST00000575214 RASAL3Q86YV0 1011 aa25.27■■□□□ 1.64
HCFC1R1-208ENST00000575214 AIDAQ96BJ3 306 aa25.27■■□□□ 1.64
HCFC1R1-208ENST00000575214 AKAP11Q9UKA4 1901 aa25.27■■□□□ 1.64
HCFC1R1-208ENST00000575214 IREB2P48200 963 aaKnown RBP25.26■■□□□ 1.63
HCFC1R1-208ENST00000575214 MAP3K11Q16584 847 aa25.26■■□□□ 1.63
HCFC1R1-208ENST00000575214 GPR75-ASB3A0A0A6YYF3 556 aa25.25■■□□□ 1.63
HCFC1R1-208ENST00000575214 LDLRAD1Q5T700 205 aa25.25■■□□□ 1.63
HCFC1R1-208ENST00000575214 FAM151AQ8WW52 585 aa25.25■■□□□ 1.63
HCFC1R1-208ENST00000575214 ZIC5Q96T25 663 aa25.25■■□□□ 1.63
HCFC1R1-208ENST00000575214 WBP1LQ9NX94 342 aa25.25■■□□□ 1.63
HCFC1R1-208ENST00000575214 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.25■■□□□ 1.63
HCFC1R1-208ENST00000575214 RPAP1Q9BWH6 1393 aaPredicted RBP25.24■■□□□ 1.63
HCFC1R1-208ENST00000575214 USP2O75604 605 aaPredicted RBP25.24■■□□□ 1.63
HCFC1R1-208ENST00000575214 IDH1O75874 414 aaKnown RBP25.24■■□□□ 1.63
HCFC1R1-208ENST00000575214 NOL10Q9BSC4 688 aaKnown RBP25.24■■□□□ 1.63
HCFC1R1-208ENST00000575214 FAM198AQ9UFP1 575 aa25.24■■□□□ 1.63
HCFC1R1-208ENST00000575214 AAMPQ13685 434 aa25.23■■□□□ 1.63
HCFC1R1-208ENST00000575214 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.23■■□□□ 1.63
HCFC1R1-208ENST00000575214 HOOK2Q96ED9 719 aa25.23■■□□□ 1.63
HCFC1R1-208ENST00000575214 DNAJC2Q99543 621 aaKnown RBP25.23■■□□□ 1.63
HCFC1R1-208ENST00000575214 BEGAINQ9BUH8 593 aa25.23■■□□□ 1.63
HCFC1R1-208ENST00000575214 IDI2Q9BXS1 227 aa25.23■■□□□ 1.63
HCFC1R1-208ENST00000575214 ANTXR1Q9H6X2 564 aa25.23■■□□□ 1.63
HCFC1R1-208ENST00000575214 IGSF3O75054 1194 aa25.22■■□□□ 1.63
HCFC1R1-208ENST00000575214 RGS3P49796 1198 aa25.22■■□□□ 1.63
HCFC1R1-208ENST00000575214 RHBDL3P58872 404 aa25.21■■□□□ 1.63
HCFC1R1-208ENST00000575214 KIF23Q02241 960 aaPredicted RBP25.21■■□□□ 1.63
HCFC1R1-208ENST00000575214 PICALMQ13492 652 aa25.21■■□□□ 1.63
HCFC1R1-208ENST00000575214 TTF1Q15361 905 aaPredicted RBP25.21■■□□□ 1.63
HCFC1R1-208ENST00000575214 EXOC6Q8TAG9 804 aa25.21■■□□□ 1.63
HCFC1R1-208ENST00000575214 MAST2Q6P0Q8 1798 aa25.21■■□□□ 1.63
HCFC1R1-208ENST00000575214 FOXN1O15353 648 aa25.2■■□□□ 1.63
HCFC1R1-208ENST00000575214 ENTPD3O75355 529 aa25.2■■□□□ 1.63
HCFC1R1-208ENST00000575214 WDHD1O75717 1129 aaPredicted RBP25.2■■□□□ 1.63
HCFC1R1-208ENST00000575214 MAP3K12Q12852 859 aa25.2■■□□□ 1.63
HCFC1R1-208ENST00000575214 ANKRD13AQ8IZ07 590 aa25.2■■□□□ 1.63
HCFC1R1-208ENST00000575214 SLC10A4Q96EP9 437 aa25.2■■□□□ 1.63
HCFC1R1-208ENST00000575214 CLMNQ96JQ2 1002 aa25.2■■□□□ 1.63
HCFC1R1-208ENST00000575214 BOLA2Q9H3K6 86 aa25.2■■□□□ 1.63
HCFC1R1-208ENST00000575214 AATFQ9NY61 560 aaKnown RBP eCLIP25.2■■□□□ 1.63
HCFC1R1-208ENST00000575214 RFX7Q2KHR2 1363 aa25.2■■□□□ 1.62
HCFC1R1-208ENST00000575214 UNCXA6NJT0 531 aa25.19■■□□□ 1.62
HCFC1R1-208ENST00000575214 BAG3O95817 575 aa25.19■■□□□ 1.62
HCFC1R1-208ENST00000575214 ATP5JP18859 108 aa25.19■■□□□ 1.62
HCFC1R1-208ENST00000575214 MKRN3Q13064 507 aaKnown RBP25.19■■□□□ 1.62
HCFC1R1-208ENST00000575214 DCAF15Q66K64 600 aa25.19■■□□□ 1.62
HCFC1R1-208ENST00000575214 ZFPM1Q8IX07 1006 aa25.19■■□□□ 1.62
HCFC1R1-208ENST00000575214 DDX4Q9NQI0 724 aaKnown RBP25.19■■□□□ 1.62
HCFC1R1-208ENST00000575214 GOLIM4O00461 696 aa25.18■■□□□ 1.62
HCFC1R1-208ENST00000575214 MAP4K4O95819 1239 aaPredicted RBP25.18■■□□□ 1.62
HCFC1R1-208ENST00000575214 CYP7A1P22680 504 aa25.18■■□□□ 1.62
HCFC1R1-208ENST00000575214 ADGRA1Q86SQ6 560 aa25.18■■□□□ 1.62
HCFC1R1-208ENST00000575214 ZSCAN29Q8IWY8 852 aaPredicted RBP25.18■■□□□ 1.62
HCFC1R1-208ENST00000575214 TEX11Q8IYF3 940 aa25.18■■□□□ 1.62
HCFC1R1-208ENST00000575214 MAGEB6Q8N7X4 407 aa25.18■■□□□ 1.62
HCFC1R1-208ENST00000575214 HDAC1Q13547 482 aaPredicted RBP25.18■■□□□ 1.62
HCFC1R1-208ENST00000575214 MIGA2Q7L4E1 593 aa25.18■■□□□ 1.62
HCFC1R1-208ENST00000575214 GPATCH3Q96I76 525 aa25.18■■□□□ 1.62
HCFC1R1-208ENST00000575214 PLCG2P16885 1265 aa25.17■■□□□ 1.62
HCFC1R1-208ENST00000575214 MAP3K9P80192 1104 aa25.17■■□□□ 1.62
HCFC1R1-208ENST00000575214 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.17■■□□□ 1.623e-9■■■□□ 16.8
HCFC1R1-208ENST00000575214 SH3RF3Q8TEJ3 882 aaPredicted RBP25.17■■□□□ 1.62
HCFC1R1-208ENST00000575214 WRNIP1Q96S55 665 aa25.17■■□□□ 1.62
HCFC1R1-208ENST00000575214 CSRNP1Q96S65 589 aa25.17■■□□□ 1.62
HCFC1R1-208ENST00000575214 ECHDC1Q9NTX5 307 aa25.17■■□□□ 1.62
HCFC1R1-208ENST00000575214 PAG1Q9NWQ8 432 aa25.17■■□□□ 1.62
HCFC1R1-208ENST00000575214 CTCFP49711 727 aaPredicted RBP25.16■■□□□ 1.62
HCFC1R1-208ENST00000575214 SPRYD7Q5W111 196 aa25.16■■□□□ 1.62
HCFC1R1-208ENST00000575214 EDC3Q96F86 508 aaKnown RBP25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms