RNA–Protein interactions for RNA: ENST00000575135.5

TVP23A-209, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,298 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-209ENST00000575135 SNAPC2Q13487 334 aa20.91■□□□□ 0.94
TVP23A-209ENST00000575135 ZNF341Q9BYN7 854 aa20.91■□□□□ 0.94
TVP23A-209ENST00000575135 SIL1Q9H173 461 aa20.91■□□□□ 0.94
TVP23A-209ENST00000575135 SMC4Q9NTJ3 1288 aa20.91■□□□□ 0.94
TVP23A-209ENST00000575135 PTCH2Q9Y6C5 1203 aa20.91■□□□□ 0.94
TVP23A-209ENST00000575135 RPAP1Q9BWH6 1393 aaPredicted RBP20.9■□□□□ 0.94
TVP23A-209ENST00000575135 TLR2O60603 784 aa20.9■□□□□ 0.94
TVP23A-209ENST00000575135 INPP5BP32019 993 aa20.9■□□□□ 0.94
TVP23A-209ENST00000575135 DIXDC1Q155Q3 683 aa20.9■□□□□ 0.94
TVP23A-209ENST00000575135 SLC9C1Q4G0N8 1177 aa20.9■□□□□ 0.94
TVP23A-209ENST00000575135 CDC42EP5Q6NZY7 148 aa20.9■□□□□ 0.94
TVP23A-209ENST00000575135 FAM151AQ8WW52 585 aa20.9■□□□□ 0.94
TVP23A-209ENST00000575135 ZNF333Q96JL9 665 aa20.9■□□□□ 0.94
TVP23A-209ENST00000575135 ZCCHC17Q9NP64 241 aaKnown RBP20.9■□□□□ 0.94
TVP23A-209ENST00000575135 DAGLAQ9Y4D2 1042 aa20.9■□□□□ 0.94
TVP23A-209ENST00000575135 PPATQ06203 517 aa20.89■□□□□ 0.93
TVP23A-209ENST00000575135 TCP10Q12799 353 aa20.89■□□□□ 0.93
TVP23A-209ENST00000575135 ATP2B3Q16720 1220 aa20.89■□□□□ 0.93
TVP23A-209ENST00000575135 TMEM106CQ9BVX2 250 aa20.89■□□□□ 0.93
TVP23A-209ENST00000575135 ARHGAP39Q9C0H5 1083 aa20.89■□□□□ 0.93
TVP23A-209ENST00000575135 AK9Q5TCS8 1911 aa20.88■□□□□ 0.93
TVP23A-209ENST00000575135 ZSWIM8A7E2V4 1837 aa20.88■□□□□ 0.93
TVP23A-209ENST00000575135 UBTFL1P0CB47 393 aaPredicted RBP20.88■□□□□ 0.93
TVP23A-209ENST00000575135 PRDX5P30044 214 aa20.88■□□□□ 0.93
TVP23A-209ENST00000575135 NFIAQ12857 509 aa20.88■□□□□ 0.93
TVP23A-209ENST00000575135 NBPF11Q86T75 865 aa20.88■□□□□ 0.93
TVP23A-209ENST00000575135 CEP126Q9P2H0 1117 aa20.88■□□□□ 0.93
TVP23A-209ENST00000575135 CIAO1O76071 339 aa20.87■□□□□ 0.93
TVP23A-209ENST00000575135 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.87■□□□□ 0.93
TVP23A-209ENST00000575135 GNL3LQ9NVN8 582 aaKnown RBP20.87■□□□□ 0.93
TVP23A-209ENST00000575135 FBXO3Q9UK99 471 aa20.87■□□□□ 0.93
TVP23A-209ENST00000575135 MYCP01106 439 aaPredicted RBP20.86■□□□□ 0.93
TVP23A-209ENST00000575135 LDHBP07195 334 aaKnown RBP20.86■□□□□ 0.93
TVP23A-209ENST00000575135 LACTBP83111 547 aaPredicted RBP20.86■□□□□ 0.93
TVP23A-209ENST00000575135 KIF22Q14807 665 aa20.86■□□□□ 0.93
TVP23A-209ENST00000575135 TRMT2AQ8IZ69 625 aaKnown RBP20.86■□□□□ 0.93
TVP23A-209ENST00000575135 GCC1Q96CN9 775 aa20.86■□□□□ 0.93
TVP23A-209ENST00000575135 USP40Q9NVE5 1235 aa20.86■□□□□ 0.93
TVP23A-209ENST00000575135 FAM198AQ9UFP1 575 aa20.86■□□□□ 0.93
TVP23A-209ENST00000575135 ZNF112Q9UJU3 913 aa20.86■□□□□ 0.93
TVP23A-209ENST00000575135 NOB1Q9ULX3 412 aaKnown RBP20.86■□□□□ 0.93
TVP23A-209ENST00000575135 PHKA1P46020 1223 aa20.85■□□□□ 0.93
TVP23A-209ENST00000575135 PA2G4Q9UQ80 394 aaKnown RBP20.85■□□□□ 0.93
TVP23A-209ENST00000575135 LRRFIP2Q9Y608 721 aaKnown RBP20.85■□□□□ 0.93
TVP23A-209ENST00000575135 ECM2O94769 699 aaPredicted RBP20.84■□□□□ 0.93
TVP23A-209ENST00000575135 IL15P40933 162 aaPredicted RBP20.84■□□□□ 0.93
TVP23A-209ENST00000575135 SLC4A8Q2Y0W8 1093 aa20.84■□□□□ 0.93
TVP23A-209ENST00000575135 C17orf99Q6UX52 265 aa20.84■□□□□ 0.93
TVP23A-209ENST00000575135 ZFPM1Q8IX07 1006 aa20.84■□□□□ 0.93
TVP23A-209ENST00000575135 SH3TC2Q8TF17 1288 aa20.84■□□□□ 0.93
TVP23A-209ENST00000575135 DENND2AQ9ULE3 1009 aa20.84■□□□□ 0.93
TVP23A-209ENST00000575135 SALL1Q9NSC2 1324 aa20.83■□□□□ 0.93
TVP23A-209ENST00000575135 PDHXO00330 501 aa20.83■□□□□ 0.93
TVP23A-209ENST00000575135 SEMA3EO15041 775 aa20.83■□□□□ 0.93
TVP23A-209ENST00000575135 ADORA1P30542 326 aa20.83■□□□□ 0.93
TVP23A-209ENST00000575135 ANKRD23Q86SG2 305 aa20.83■□□□□ 0.93
TVP23A-209ENST00000575135 CPA4Q9UI42 421 aa20.83■□□□□ 0.93
TVP23A-209ENST00000575135 KCNH4Q9UQ05 1017 aa20.83■□□□□ 0.93
TVP23A-209ENST00000575135 GNRH1P01148 92 aa20.82■□□□□ 0.92
TVP23A-209ENST00000575135 MOGSQ13724 837 aa20.82■□□□□ 0.92
TVP23A-209ENST00000575135 API5Q9BZZ5 524 aaKnown RBP20.82■□□□□ 0.92
TVP23A-209ENST00000575135 COPRSQ9NQ92 184 aa20.82■□□□□ 0.92
TVP23A-209ENST00000575135 CEP290O15078 2479 aa20.82■□□□□ 0.92
TVP23A-209ENST00000575135 MYH2Q9UKX2 1941 aa20.81■□□□□ 0.92
TVP23A-209ENST00000575135 CTGFP29279 349 aa20.81■□□□□ 0.92
TVP23A-209ENST00000575135 HABP4Q5JVS0 413 aaKnown RBP20.81■□□□□ 0.92
TVP23A-209ENST00000575135 NOL9Q5SY16 702 aaKnown RBP20.81■□□□□ 0.92
TVP23A-209ENST00000575135 CCDC102BQ68D86 513 aa20.81■□□□□ 0.92
TVP23A-209ENST00000575135 HDAC5Q9UQL6 1122 aa20.81■□□□□ 0.92
TVP23A-209ENST00000575135 CT47B1P0C2W7 299 aaPredicted RBP20.8■□□□□ 0.92
TVP23A-209ENST00000575135 PSMC4P43686 418 aa20.8■□□□□ 0.92
TVP23A-209ENST00000575135 RGS3P49796 1198 aa20.8■□□□□ 0.92
TVP23A-209ENST00000575135 PRMT2P55345 433 aa20.8■□□□□ 0.92
TVP23A-209ENST00000575135 TIMM10P62072 90 aa20.8■□□□□ 0.92
TVP23A-209ENST00000575135 TRIM47Q96LD4 638 aa20.8■□□□□ 0.92
TVP23A-209ENST00000575135 MEIS3Q99687 375 aa20.8■□□□□ 0.92
TVP23A-209ENST00000575135 ADGRA2Q96PE1 1338 aa20.79■□□□□ 0.92
TVP23A-209ENST00000575135 ATRNL1Q5VV63 1379 aa20.78■□□□□ 0.92
TVP23A-209ENST00000575135 PHF20L1A8MW92 1017 aa20.78■□□□□ 0.92
TVP23A-209ENST00000575135 ZBTB22O15209 634 aa20.78■□□□□ 0.92
TVP23A-209ENST00000575135 RASGRF1Q13972 1273 aa20.78■□□□□ 0.92
TVP23A-209ENST00000575135 ZGPATQ8N5A5 531 aaKnown RBP20.78■□□□□ 0.92
TVP23A-209ENST00000575135 IDI2Q9BXS1 227 aa20.78■□□□□ 0.92
TVP23A-209ENST00000575135 ABCF2Q9UG63 623 aa20.78■□□□□ 0.92
TVP23A-209ENST00000575135 SRRDQ9UH36 339 aa20.78■□□□□ 0.92
TVP23A-209ENST00000575135 GAKO14976 1311 aa20.78■□□□□ 0.92
TVP23A-209ENST00000575135 CXCL11O14625 94 aa20.77■□□□□ 0.92
TVP23A-209ENST00000575135 ENTPD3O75355 529 aa20.77■□□□□ 0.92
TVP23A-209ENST00000575135 FMNL1O95466 1100 aaPredicted RBP20.77■□□□□ 0.92
TVP23A-209ENST00000575135 OSBPP22059 807 aa20.77■□□□□ 0.92
TVP23A-209ENST00000575135 GPAT2Q6NUI2 795 aa20.77■□□□□ 0.92
TVP23A-209ENST00000575135 SH3BP5LQ7L8J4 393 aa20.77■□□□□ 0.92
TVP23A-209ENST00000575135 DZIP1Q86YF9 867 aaKnown RBP20.77■□□□□ 0.92
TVP23A-209ENST00000575135 ZHX2Q9Y6X8 837 aa20.77■□□□□ 0.92
TVP23A-209ENST00000575135 DOCK2Q92608 1830 aa20.76■□□□□ 0.91
TVP23A-209ENST00000575135 CYP2C8P10632 490 aa20.76■□□□□ 0.91
TVP23A-209ENST00000575135 MTFR1Q15390 333 aa20.76■□□□□ 0.91
TVP23A-209ENST00000575135 ZSCAN29Q8IWY8 852 aaPredicted RBP20.76■□□□□ 0.91
TVP23A-209ENST00000575135 SCYL3Q8IZE3 742 aa20.76■□□□□ 0.91
TVP23A-209ENST00000575135 PARK7Q99497 189 aaKnown RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms