RNA–Protein interactions for RNA: ENST00000574379.2

NCBP3-203, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-203ENST00000574379 TRIM47Q96LD4 638 aa12.46□□□□□ -0.41
NCBP3-203ENST00000574379 YTHDC1Q96MU7 727 aaKnown RBP12.46□□□□□ -0.41
NCBP3-203ENST00000574379 MPHOSPH8Q99549 860 aa12.46□□□□□ -0.41
NCBP3-203ENST00000574379 RIPOR2Q9Y4F9 1068 aa12.46□□□□□ -0.41
NCBP3-203ENST00000574379 TNFRSF10AO00220 468 aa12.45□□□□□ -0.42
NCBP3-203ENST00000574379 FMNL1O95466 1100 aaPredicted RBP12.45□□□□□ -0.42
NCBP3-203ENST00000574379 ATP2B4P23634 1241 aa12.45□□□□□ -0.42
NCBP3-203ENST00000574379 PRMT2P55345 433 aa12.45□□□□□ -0.42
NCBP3-203ENST00000574379 DZIP1LQ8IYY4 767 aaKnown RBP12.45□□□□□ -0.42
NCBP3-203ENST00000574379 MAFAQ8NHW3 353 aaPredicted RBP12.45□□□□□ -0.42
NCBP3-203ENST00000574379 GMLQ99445 158 aa12.45□□□□□ -0.42
NCBP3-203ENST00000574379 DEFB129Q9H1M3 183 aa12.45□□□□□ -0.42
NCBP3-203ENST00000574379 LRRFIP2Q9Y608 721 aaKnown RBP12.45□□□□□ -0.42
NCBP3-203ENST00000574379 ARAP2Q8WZ64 1704 aa12.45□□□□□ -0.42
NCBP3-203ENST00000574379 EYSQ5T1H1 3165 aa12.44□□□□□ -0.42
NCBP3-203ENST00000574379 MED23Q9ULK4 1368 aa12.44□□□□□ -0.42
NCBP3-203ENST00000574379 GNRH1P01148 92 aa12.44□□□□□ -0.42
NCBP3-203ENST00000574379 GNAI3P08754 354 aa12.44□□□□□ -0.42
NCBP3-203ENST00000574379 MAGEA10P43363 369 aaPredicted RBP12.44□□□□□ -0.42
NCBP3-203ENST00000574379 RFX5P48382 616 aaPredicted RBP12.44□□□□□ -0.42
NCBP3-203ENST00000574379 CHRNDQ07001 517 aa12.44□□□□□ -0.42
NCBP3-203ENST00000574379 TAF7LQ5H9L4 462 aa12.44□□□□□ -0.42
NCBP3-203ENST00000574379 FTSJ3Q8IY81 847 aaKnown RBP12.44□□□□□ -0.42
NCBP3-203ENST00000574379 ANKRD2Q9GZV1 360 aa12.44□□□□□ -0.42
NCBP3-203ENST00000574379 HOXD10P28358 340 aa12.43□□□□□ -0.42
NCBP3-203ENST00000574379 PSMC4P43686 418 aa12.43□□□□□ -0.42
NCBP3-203ENST00000574379 ZNF697Q5TEC3 545 aa12.43□□□□□ -0.42
NCBP3-203ENST00000574379 LDHAL6AQ6ZMR3 332 aa12.43□□□□□ -0.42
NCBP3-203ENST00000574379 ANKRD13AQ8IZ07 590 aa12.43□□□□□ -0.42
NCBP3-203ENST00000574379 FAM43AQ8N2R8 423 aa12.43□□□□□ -0.42
NCBP3-203ENST00000574379 BRI3BPQ8WY22 251 aa12.43□□□□□ -0.42
NCBP3-203ENST00000574379 PAWRQ96IZ0 340 aaKnown RBP12.43□□□□□ -0.42
NCBP3-203ENST00000574379 PUS3Q9BZE2 481 aaKnown RBP12.43□□□□□ -0.42
NCBP3-203ENST00000574379 UNC93B1Q9H1C4 597 aa12.43□□□□□ -0.42
NCBP3-203ENST00000574379 CNNM1Q9NRU3 951 aa12.43□□□□□ -0.42
NCBP3-203ENST00000574379 HDAC5Q9UQL6 1122 aa12.43□□□□□ -0.42
NCBP3-203ENST00000574379 LEMD3Q9Y2U8 911 aa12.43□□□□□ -0.42
NCBP3-203ENST00000574379 ZNF804BA4D1E1 1349 aa12.42□□□□□ -0.42
NCBP3-203ENST00000574379 MYPNQ86TC9 1320 aa12.42□□□□□ -0.42
NCBP3-203ENST00000574379 TESPA1A2RU30 521 aaPredicted RBP12.42□□□□□ -0.42
NCBP3-203ENST00000574379 SGPL1O95470 568 aa12.42□□□□□ -0.42
NCBP3-203ENST00000574379 MAP3K12Q12852 859 aa12.42□□□□□ -0.42
NCBP3-203ENST00000574379 MAP3K11Q16584 847 aa12.42□□□□□ -0.42
NCBP3-203ENST00000574379 SUPT20HL1Q3ZLR7 823 aa12.42□□□□□ -0.42
NCBP3-203ENST00000574379 KIAA0825Q8IV33 1275 aa12.42□□□□□ -0.42
NCBP3-203ENST00000574379 HELBQ8NG08 1087 aaPredicted RBP12.42□□□□□ -0.42
NCBP3-203ENST00000574379 KLHDC4Q8TBB5 520 aa12.42□□□□□ -0.42
NCBP3-203ENST00000574379 PANK1Q8TE04 598 aa12.42□□□□□ -0.42
NCBP3-203ENST00000574379 SRRDQ9UH36 339 aa12.42□□□□□ -0.42
NCBP3-203ENST00000574379 TLR2O60603 784 aa12.41□□□□□ -0.42
NCBP3-203ENST00000574379 TAF5LO75529 589 aa12.41□□□□□ -0.42
NCBP3-203ENST00000574379 GTF2A2P52657 109 aa12.41□□□□□ -0.42
NCBP3-203ENST00000574379 MTX1Q13505 466 aa12.41□□□□□ -0.42
NCBP3-203ENST00000574379 LRRC24Q50LG9 513 aa12.41□□□□□ -0.42
NCBP3-203ENST00000574379 PODNQ7Z5L7 613 aa12.41□□□□□ -0.42
NCBP3-203ENST00000574379 ITPRIPQ8IWB1 547 aa12.41□□□□□ -0.42
NCBP3-203ENST00000574379 DEFB118Q96PH6 123 aa12.41□□□□□ -0.42
NCBP3-203ENST00000574379 VEZTQ9HBM0 779 aa12.41□□□□□ -0.42
NCBP3-203ENST00000574379 FBXO3Q9UK99 471 aa12.41□□□□□ -0.42
NCBP3-203ENST00000574379 ECM29Q5VYK3 1845 aa12.4□□□□□ -0.42
NCBP3-203ENST00000574379 SNAP23O00161 211 aa12.4□□□□□ -0.42
NCBP3-203ENST00000574379 PLIN1O60240 522 aa12.4□□□□□ -0.42
NCBP3-203ENST00000574379 GNAI2P04899 355 aa12.4□□□□□ -0.42
NCBP3-203ENST00000574379 MS4A1P11836 297 aa12.4□□□□□ -0.42
NCBP3-203ENST00000574379 OSBPP22059 807 aa12.4□□□□□ -0.42
NCBP3-203ENST00000574379 KLRK1P26718 216 aa12.4□□□□□ -0.42
NCBP3-203ENST00000574379 C15orf52Q6ZUT6 534 aaKnown RBP12.4□□□□□ -0.42
NCBP3-203ENST00000574379 NECAB2Q7Z6G3 386 aa12.4□□□□□ -0.42
NCBP3-203ENST00000574379 TXNRD3Q86VQ6 643 aa12.4□□□□□ -0.42
NCBP3-203ENST00000574379 CPA4Q9UI42 421 aa12.4□□□□□ -0.42
NCBP3-203ENST00000574379 COL1A1P02452 1464 aaPredicted RBP12.4□□□□□ -0.43
NCBP3-203ENST00000574379 MROH5Q6ZUA9 1318 aa12.39□□□□□ -0.43
NCBP3-203ENST00000574379 MYO3BQ8WXR4 1341 aa12.39□□□□□ -0.43
NCBP3-203ENST00000574379 SSC5DA1L4H1 1573 aa12.39□□□□□ -0.43
NCBP3-203ENST00000574379 CLRN2A0PK11 232 aa12.39□□□□□ -0.43
NCBP3-203ENST00000574379 EYA2O00167 538 aa12.39□□□□□ -0.43
NCBP3-203ENST00000574379 USP2O75604 605 aaPredicted RBP12.39□□□□□ -0.43
NCBP3-203ENST00000574379 KCNJ4P48050 445 aa12.39□□□□□ -0.43
NCBP3-203ENST00000574379 DLGAP5Q15398 846 aa12.39□□□□□ -0.43
NCBP3-203ENST00000574379 NBPF12Q5TAG4 269 aaPredicted RBP12.39□□□□□ -0.43
NCBP3-203ENST00000574379 VGLL2Q8N8G2 317 aa12.39□□□□□ -0.43
NCBP3-203ENST00000574379 MS4A4AQ96JQ5 239 aa12.39□□□□□ -0.43
NCBP3-203ENST00000574379 CDX2Q99626 313 aaPredicted RBP12.39□□□□□ -0.43
NCBP3-203ENST00000574379 LAMB1P07942 1786 aa12.38□□□□□ -0.43
NCBP3-203ENST00000574379 UNCXA6NJT0 531 aa12.38□□□□□ -0.43
NCBP3-203ENST00000574379 METTL24Q5JXM2 366 aa12.38□□□□□ -0.43
NCBP3-203ENST00000574379 DACT2Q5SW24 774 aa12.38□□□□□ -0.43
NCBP3-203ENST00000574379 ATG9AQ7Z3C6 839 aa12.38□□□□□ -0.43
NCBP3-203ENST00000574379 DIS3LQ8TF46 1054 aaKnown RBP12.38□□□□□ -0.43
NCBP3-203ENST00000574379 COPRSQ9NQ92 184 aa12.38□□□□□ -0.43
NCBP3-203ENST00000574379 TAOK2Q9UL54 1235 aa12.38□□□□□ -0.43
NCBP3-203ENST00000574379 PNMA6EA0A0J9YXQ4 647 aa12.37□□□□□ -0.43
NCBP3-203ENST00000574379 SRGAP3O43295 1099 aa12.37□□□□□ -0.43
NCBP3-203ENST00000574379 MYO1BO43795 1136 aa12.37□□□□□ -0.43
NCBP3-203ENST00000574379 CIAO1O76071 339 aa12.37□□□□□ -0.43
NCBP3-203ENST00000574379 UBE4AQ14139 1066 aa12.37□□□□□ -0.43
NCBP3-203ENST00000574379 MVPQ14764 893 aaKnown RBP12.37□□□□□ -0.43
NCBP3-203ENST00000574379 TJAP1Q5JTD0 557 aa12.37□□□□□ -0.43
NCBP3-203ENST00000574379 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.37□□□□□ -0.43
NCBP3-203ENST00000574379 MYLIPQ8WY64 445 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms