RNA–Protein interactions for RNA: ENST00000574163.1

NDE1-210, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-210ENST00000574163 DEFB115Q30KQ5 88 aa11.96□□□□□ -0.49
NDE1-210ENST00000574163 PI16Q6UXB8 463 aa11.96□□□□□ -0.49
NDE1-210ENST00000574163 FAM83AQ86UY5 434 aa11.96□□□□□ -0.49
NDE1-210ENST00000574163 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.96□□□□□ -0.49
NDE1-210ENST00000574163 CCDC8Q9H0W5 538 aaPredicted RBP11.96□□□□□ -0.49
NDE1-210ENST00000574163 DCTPP1Q9H773 170 aa11.96□□□□□ -0.49
NDE1-210ENST00000574163 TDRD3Q9H7E2 651 aaKnown RBP11.96□□□□□ -0.49
NDE1-210ENST00000574163 ABCF2Q9UG63 623 aa11.96□□□□□ -0.49
NDE1-210ENST00000574163 PCNTO95613 3336 aa11.96□□□□□ -0.5
NDE1-210ENST00000574163 MYH7P12883 1935 aa11.96□□□□□ -0.5
NDE1-210ENST00000574163 MAP4K4O95819 1239 aaPredicted RBP11.95□□□□□ -0.5
NDE1-210ENST00000574163 IFIT2P09913 472 aaKnown RBP11.95□□□□□ -0.5
NDE1-210ENST00000574163 VEGFBP49765 207 aa11.95□□□□□ -0.5
NDE1-210ENST00000574163 RASA3Q14644 834 aa11.95□□□□□ -0.5
NDE1-210ENST00000574163 SUPT20HL1Q3ZLR7 823 aa11.95□□□□□ -0.5
NDE1-210ENST00000574163 DLK2Q6UY11 383 aa11.95□□□□□ -0.5
NDE1-210ENST00000574163 CAPNS2Q96L46 248 aa11.95□□□□□ -0.5
NDE1-210ENST00000574163 PCDHB15Q9Y5E8 787 aa11.95□□□□□ -0.5
NDE1-210ENST00000574163 CDK5RAP2Q96SN8 1893 aa11.95□□□□□ -0.5
NDE1-210ENST00000574163 COL2A1P02458 1487 aaPredicted RBP11.95□□□□□ -0.5
NDE1-210ENST00000574163 UNCXA6NJT0 531 aa11.94□□□□□ -0.5
NDE1-210ENST00000574163 APBB1O00213 710 aa11.94□□□□□ -0.5
NDE1-210ENST00000574163 LDHCP07864 332 aa11.94□□□□□ -0.5
NDE1-210ENST00000574163 MECOMQ03112 1051 aa11.94□□□□□ -0.5
NDE1-210ENST00000574163 HDAC1Q13547 482 aaPredicted RBP11.94□□□□□ -0.5
NDE1-210ENST00000574163 MAP3K11Q16584 847 aa11.94□□□□□ -0.5
NDE1-210ENST00000574163 ARMC9Q7Z3E5 817 aa11.94□□□□□ -0.5
NDE1-210ENST00000574163 ZNF384Q8TF68 577 aa11.94□□□□□ -0.5
NDE1-210ENST00000574163 NSUN4Q96CB9 384 aaKnown RBP11.94□□□□□ -0.5
NDE1-210ENST00000574163 HOOK2Q96ED9 719 aa11.94□□□□□ -0.5
NDE1-210ENST00000574163 WDR33Q9C0J8 1336 aaKnown RBP11.93□□□□□ -0.5
NDE1-210ENST00000574163 CYP2E1P05181 493 aaPredicted RBP11.93□□□□□ -0.5
NDE1-210ENST00000574163 ZAP70P43403 619 aa11.93□□□□□ -0.5
NDE1-210ENST00000574163 NOGQ13253 232 aa11.93□□□□□ -0.5
NDE1-210ENST00000574163 RGMBQ6NW40 437 aa11.93□□□□□ -0.5
NDE1-210ENST00000574163 CDC42EP5Q6NZY7 148 aa11.93□□□□□ -0.5
NDE1-210ENST00000574163 TEPSINQ96N21 525 aa11.93□□□□□ -0.5
NDE1-210ENST00000574163 SNRKQ9NRH2 765 aa11.93□□□□□ -0.5
NDE1-210ENST00000574163 RAI14Q9P0K7 980 aa11.93□□□□□ -0.5
NDE1-210ENST00000574163 LRP2BPQ9P2M1 347 aa11.93□□□□□ -0.5
NDE1-210ENST00000574163 SCAF8Q9UPN6 1271 aaKnown RBP11.93□□□□□ -0.5
NDE1-210ENST00000574163 AK9Q5TCS8 1911 aa11.92□□□□□ -0.5
NDE1-210ENST00000574163 GPR75-ASB3A0A0A6YYF3 556 aa11.92□□□□□ -0.5
NDE1-210ENST00000574163 TCP10L2B9ZVM9 353 aa11.92□□□□□ -0.5
NDE1-210ENST00000574163 PPP1R12BO60237 982 aaPredicted RBP11.92□□□□□ -0.5
NDE1-210ENST00000574163 SLC10A3P09131 477 aa11.92□□□□□ -0.5
NDE1-210ENST00000574163 MAP2K2P36507 400 aa11.92□□□□□ -0.5
NDE1-210ENST00000574163 TTF1Q15361 905 aaPredicted RBP11.92□□□□□ -0.5
NDE1-210ENST00000574163 PRAMEF18Q5VWM3 479 aa11.92□□□□□ -0.5
NDE1-210ENST00000574163 CYP4F22Q6NT55 531 aa11.92□□□□□ -0.5
NDE1-210ENST00000574163 TBC1D9Q6ZT07 1266 aa11.92□□□□□ -0.5
NDE1-210ENST00000574163 CERS3Q8IU89 383 aa11.92□□□□□ -0.5
NDE1-210ENST00000574163 FAM151AQ8WW52 585 aa11.92□□□□□ -0.5
NDE1-210ENST00000574163 CCDC102AQ96A19 550 aa11.92□□□□□ -0.5
NDE1-210ENST00000574163 IDI2Q9BXS1 227 aa11.92□□□□□ -0.5
NDE1-210ENST00000574163 PIH1D3Q9NQM4 214 aaKnown RBP11.92□□□□□ -0.5
NDE1-210ENST00000574163 SUPT16HQ9Y5B9 1047 aaKnown RBP11.92□□□□□ -0.5
NDE1-210ENST00000574163 ENTPD3O75355 529 aa11.91□□□□□ -0.5
NDE1-210ENST00000574163 PLCG2P16885 1265 aa11.91□□□□□ -0.5
NDE1-210ENST00000574163 ATP5JP18859 108 aa11.91□□□□□ -0.5
NDE1-210ENST00000574163 BTDP43251 543 aa11.91□□□□□ -0.5
NDE1-210ENST00000574163 CACNB3P54284 484 aa11.91□□□□□ -0.5
NDE1-210ENST00000574163 TTLL12Q14166 644 aaPredicted RBP11.91□□□□□ -0.5
NDE1-210ENST00000574163 LDLRAD1Q5T700 205 aa11.91□□□□□ -0.5
NDE1-210ENST00000574163 NBPF12Q5TAG4 269 aaPredicted RBP11.91□□□□□ -0.5
NDE1-210ENST00000574163 NAA16Q6N069 864 aaPredicted RBP11.91□□□□□ -0.5
NDE1-210ENST00000574163 PAXIP1Q6ZW49 1069 aaPredicted RBP11.91□□□□□ -0.5
NDE1-210ENST00000574163 RASAL3Q86YV0 1011 aa11.91□□□□□ -0.5
NDE1-210ENST00000574163 GCC1Q96CN9 775 aa11.91□□□□□ -0.5
NDE1-210ENST00000574163 GPATCH3Q96I76 525 aa11.91□□□□□ -0.5
NDE1-210ENST00000574163 TMEM39BQ9GZU3 492 aa11.91□□□□□ -0.5
NDE1-210ENST00000574163 DDX60LQ5H9U9 1706 aaKnown RBP11.91□□□□□ -0.5
NDE1-210ENST00000574163 ATRNL1Q5VV63 1379 aa11.91□□□□□ -0.5
NDE1-210ENST00000574163 FAM155AB1AL88 458 aaPredicted RBP11.9□□□□□ -0.5
NDE1-210ENST00000574163 WDHD1O75717 1129 aaPredicted RBP11.9□□□□□ -0.5
NDE1-210ENST00000574163 IREB2P48200 963 aaKnown RBP11.9□□□□□ -0.5
NDE1-210ENST00000574163 ZNF157P51786 506 aaPredicted RBP11.9□□□□□ -0.5
NDE1-210ENST00000574163 RHBDL3P58872 404 aa11.9□□□□□ -0.5
NDE1-210ENST00000574163 MAP2K1Q02750 393 aaPredicted RBP11.9□□□□□ -0.5
NDE1-210ENST00000574163 MAP3K12Q12852 859 aa11.9□□□□□ -0.5
NDE1-210ENST00000574163 NOL10Q9BSC4 688 aaKnown RBP11.9□□□□□ -0.5
NDE1-210ENST00000574163 USP40Q9NVE5 1235 aa11.9□□□□□ -0.5
NDE1-210ENST00000574163 FAM198AQ9UFP1 575 aa11.9□□□□□ -0.5
NDE1-210ENST00000574163 UBE2Q2LH0YL09 131 aa11.89□□□□□ -0.51
NDE1-210ENST00000574163 SMARCA5O60264 1052 aaPredicted RBP11.89□□□□□ -0.51
NDE1-210ENST00000574163 IDH1O75874 414 aaKnown RBP11.89□□□□□ -0.51
NDE1-210ENST00000574163 BAG3O95817 575 aa11.89□□□□□ -0.51
NDE1-210ENST00000574163 PPP4CP60510 307 aa11.89□□□□□ -0.51
NDE1-210ENST00000574163 NFIAQ12857 509 aa11.89□□□□□ -0.51
NDE1-210ENST00000574163 DCAF15Q66K64 600 aa11.89□□□□□ -0.51
NDE1-210ENST00000574163 REM2Q8IYK8 340 aaPredicted RBP11.89□□□□□ -0.51
NDE1-210ENST00000574163 EXOC6Q8TAG9 804 aa11.89□□□□□ -0.51
NDE1-210ENST00000574163 HAUS7Q99871 368 aa11.89□□□□□ -0.51
NDE1-210ENST00000574163 ECHDC1Q9NTX5 307 aa11.89□□□□□ -0.51
NDE1-210ENST00000574163 ANGEL1Q9UNK9 670 aaKnown RBP11.89□□□□□ -0.51
NDE1-210ENST00000574163 NAV1Q8NEY1 1877 aa11.89□□□□□ -0.51
NDE1-210ENST00000574163 TTC41PQ6P2S7 1318 aa11.88□□□□□ -0.51
NDE1-210ENST00000574163 CA12O43570 354 aa11.88□□□□□ -0.51
NDE1-210ENST00000574163 RGS3P49796 1198 aa11.88□□□□□ -0.51
NDE1-210ENST00000574163 MOB2Q70IA6 237 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms