RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 SALL1Q9NSC2 1324 aa14□□□□□ -0.17
RPAIN-214ENST00000574003 SEMA3EO15041 775 aa14□□□□□ -0.17
RPAIN-214ENST00000574003 SLURP2P0DP57 97 aa14□□□□□ -0.17
RPAIN-214ENST00000574003 MAP3K9P80192 1104 aa14□□□□□ -0.17
RPAIN-214ENST00000574003 SREBF2Q12772 1141 aa14□□□□□ -0.17
RPAIN-214ENST00000574003 ZNF384Q8TF68 577 aa14□□□□□ -0.17
RPAIN-214ENST00000574003 OPTNQ96CV9 577 aa14□□□□□ -0.17
RPAIN-214ENST00000574003 USP40Q9NVE5 1235 aa14□□□□□ -0.17
RPAIN-214ENST00000574003 HMG20BQ9P0W2 317 aa14□□□□□ -0.17
RPAIN-214ENST00000574003 FAM198AQ9UFP1 575 aa14□□□□□ -0.17
RPAIN-214ENST00000574003 MANSC4A6NHS7 340 aaPredicted RBP13.99□□□□□ -0.17
RPAIN-214ENST00000574003 GPR25O00155 361 aa13.99□□□□□ -0.17
RPAIN-214ENST00000574003 OS9Q13438 667 aaPredicted RBP13.99□□□□□ -0.17
RPAIN-214ENST00000574003 MVPQ14764 893 aaKnown RBP13.99□□□□□ -0.17
RPAIN-214ENST00000574003 GORABQ5T7V8 394 aa13.99□□□□□ -0.17
RPAIN-214ENST00000574003 FAM83AQ86UY5 434 aa13.99□□□□□ -0.17
RPAIN-214ENST00000574003 IFNL1Q8IU54 200 aa13.99□□□□□ -0.17
RPAIN-214ENST00000574003 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.99□□□□□ -0.17
RPAIN-214ENST00000574003 SSH3Q8TE77 659 aa13.99□□□□□ -0.17
RPAIN-214ENST00000574003 ZKSCAN4Q969J2 545 aaPredicted RBP13.99□□□□□ -0.17
RPAIN-214ENST00000574003 PTPN18Q99952 460 aa13.99□□□□□ -0.17
RPAIN-214ENST00000574003 DBNDD2Q9BQY9 259 aa13.99□□□□□ -0.17
RPAIN-214ENST00000574003 SNRKQ9NRH2 765 aa13.99□□□□□ -0.17
RPAIN-214ENST00000574003 SURF6O75683 361 aaKnown RBP13.98□□□□□ -0.17
RPAIN-214ENST00000574003 ZBTB48P10074 688 aaPredicted RBP13.98□□□□□ -0.17
RPAIN-214ENST00000574003 MCAMP43121 646 aa13.98□□□□□ -0.17
RPAIN-214ENST00000574003 DZIP1Q86YF9 867 aaKnown RBP13.98□□□□□ -0.17
RPAIN-214ENST00000574003 OTUD5Q96G74 571 aa13.98□□□□□ -0.17
RPAIN-214ENST00000574003 WRNIP1Q96S55 665 aa13.98□□□□□ -0.17
RPAIN-214ENST00000574003 SNCAIPQ9Y6H5 919 aa13.98□□□□□ -0.17
RPAIN-214ENST00000574003 GAKO14976 1311 aa13.97□□□□□ -0.17
RPAIN-214ENST00000574003 INPP5BP32019 993 aa13.97□□□□□ -0.17
RPAIN-214ENST00000574003 MECOMQ03112 1051 aa13.97□□□□□ -0.17
RPAIN-214ENST00000574003 TNNI3KQ59H18 835 aa13.97□□□□□ -0.17
RPAIN-214ENST00000574003 FKBP1CQ5VVH2 108 aa13.97□□□□□ -0.17
RPAIN-214ENST00000574003 CEP85Q6P2H3 762 aa13.97□□□□□ -0.17
RPAIN-214ENST00000574003 SPATA5Q8NB90 893 aa13.97□□□□□ -0.17
RPAIN-214ENST00000574003 FAM151AQ8WW52 585 aa13.97□□□□□ -0.17
RPAIN-214ENST00000574003 MS4A4AQ96JQ5 239 aa13.97□□□□□ -0.17
RPAIN-214ENST00000574003 DDX4Q9NQI0 724 aaKnown RBP13.97□□□□□ -0.17
RPAIN-214ENST00000574003 TLR7Q9NYK1 1049 aaKnown RBP13.97□□□□□ -0.17
RPAIN-214ENST00000574003 FPGT-TNNI3KV9GXZ4 949 aa13.97□□□□□ -0.17
RPAIN-214ENST00000574003 ARID4AP29374 1257 aaPredicted RBP13.96□□□□□ -0.17
RPAIN-214ENST00000574003 BTDP43251 543 aa13.96□□□□□ -0.17
RPAIN-214ENST00000574003 RGS3P49796 1198 aa13.96□□□□□ -0.17
RPAIN-214ENST00000574003 ERICH6Q7L0X2 663 aa13.96□□□□□ -0.17
RPAIN-214ENST00000574003 SH3BP5LQ7L8J4 393 aa13.96□□□□□ -0.17
RPAIN-214ENST00000574003 CTU1Q7Z7A3 348 aaKnown RBP13.96□□□□□ -0.17
RPAIN-214ENST00000574003 BRI3BPQ8WY22 251 aa13.96□□□□□ -0.17
RPAIN-214ENST00000574003 CCDC8Q9H0W5 538 aaPredicted RBP13.96□□□□□ -0.17
RPAIN-214ENST00000574003 COG6Q9Y2V7 657 aa13.96□□□□□ -0.17
RPAIN-214ENST00000574003 CSADQ9Y600 493 aa13.96□□□□□ -0.17
RPAIN-214ENST00000574003 CAP1Q01518 475 aa13.95□□□□□ -0.18
RPAIN-214ENST00000574003 CRHR2Q13324 411 aa13.95□□□□□ -0.18
RPAIN-214ENST00000574003 PICALMQ13492 652 aa13.95□□□□□ -0.18
RPAIN-214ENST00000574003 ZGPATQ8N5A5 531 aaKnown RBP13.95□□□□□ -0.18
RPAIN-214ENST00000574003 EXOC6BQ9Y2D4 811 aa13.95□□□□□ -0.18
RPAIN-214ENST00000574003 MYO5AQ9Y4I1 1855 aaKnown RBP13.95□□□□□ -0.18
RPAIN-214ENST00000574003 RPAP1Q9BWH6 1393 aaPredicted RBP13.95□□□□□ -0.18
RPAIN-214ENST00000574003 MROH7-TTC4A0A0A0MT08 1334 aa13.94□□□□□ -0.18
RPAIN-214ENST00000574003 PDS5AQ29RF7 1337 aaKnown RBP13.94□□□□□ -0.18
RPAIN-214ENST00000574003 LAMB1P07942 1786 aa13.94□□□□□ -0.18
RPAIN-214ENST00000574003 CCL15-CCL14A0A0B4J2E2 113 aa13.94□□□□□ -0.18
RPAIN-214ENST00000574003 SPDYE5A6NIY4 337 aa13.94□□□□□ -0.18
RPAIN-214ENST00000574003 UNCXA6NJT0 531 aa13.94□□□□□ -0.18
RPAIN-214ENST00000574003 ZBTB22O15209 634 aa13.94□□□□□ -0.18
RPAIN-214ENST00000574003 FKTNO75072 461 aa13.94□□□□□ -0.18
RPAIN-214ENST00000574003 WDHD1O75717 1129 aaPredicted RBP13.94□□□□□ -0.18
RPAIN-214ENST00000574003 RHBDL3P58872 404 aa13.94□□□□□ -0.18
RPAIN-214ENST00000574003 CCL15Q16663 113 aa13.94□□□□□ -0.18
RPAIN-214ENST00000574003 TTC39AQ5SRH9 613 aa13.94□□□□□ -0.18
RPAIN-214ENST00000574003 SPTY2D1Q68D10 685 aaPredicted RBP13.94□□□□□ -0.18
RPAIN-214ENST00000574003 FAM43AQ8N2R8 423 aa13.94□□□□□ -0.18
RPAIN-214ENST00000574003 NSUN4Q96CB9 384 aaKnown RBP13.94□□□□□ -0.18
RPAIN-214ENST00000574003 EAF2Q96CJ1 260 aaPredicted RBP13.94□□□□□ -0.18
RPAIN-214ENST00000574003 ZNF341Q9BYN7 854 aa13.94□□□□□ -0.18
RPAIN-214ENST00000574003 RAI14Q9P0K7 980 aa13.94□□□□□ -0.18
RPAIN-214ENST00000574003 DBNLQ9UJU6 430 aaKnown RBP13.94□□□□□ -0.18
RPAIN-214ENST00000574003 NOP58Q9Y2X3 529 aaKnown RBP13.94□□□□□ -0.18
RPAIN-214ENST00000574003 NDUFB9Q9Y6M9 179 aa13.94□□□□□ -0.18
RPAIN-214ENST00000574003 RFX7Q2KHR2 1363 aa13.94□□□□□ -0.18
RPAIN-214ENST00000574003 TESPA1A2RU30 521 aaPredicted RBP13.93□□□□□ -0.18
RPAIN-214ENST00000574003 DDTLA6NHG4 134 aaPredicted RBP13.93□□□□□ -0.18
RPAIN-214ENST00000574003 IRF6O14896 467 aa13.93□□□□□ -0.18
RPAIN-214ENST00000574003 SOX10P56693 466 aa13.93□□□□□ -0.18
RPAIN-214ENST00000574003 INHBEP58166 350 aa13.93□□□□□ -0.18
RPAIN-214ENST00000574003 C20orf194Q5TEA3 1177 aa13.93□□□□□ -0.18
RPAIN-214ENST00000574003 DCAF15Q66K64 600 aa13.93□□□□□ -0.18
RPAIN-214ENST00000574003 CFHR5Q9BXR6 569 aa13.93□□□□□ -0.18
RPAIN-214ENST00000574003 IDI2Q9BXS1 227 aa13.93□□□□□ -0.18
RPAIN-214ENST00000574003 BCL11AQ9H165 835 aa13.93□□□□□ -0.18
RPAIN-214ENST00000574003 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.93□□□□□ -0.18
RPAIN-214ENST00000574003 RCAN3Q9UKA8 241 aa13.93□□□□□ -0.18
RPAIN-214ENST00000574003 ATRNL1Q5VV63 1379 aa13.93□□□□□ -0.18
RPAIN-214ENST00000574003 GPR75-ASB3A0A0A6YYF3 556 aa13.92□□□□□ -0.18
RPAIN-214ENST00000574003 FAM196BA6NMK8 535 aa13.92□□□□□ -0.18
RPAIN-214ENST00000574003 APBB1O00213 710 aa13.92□□□□□ -0.18
RPAIN-214ENST00000574003 ALDH1A1P00352 501 aa13.92□□□□□ -0.18
RPAIN-214ENST00000574003 UQCRFS1P1P0C7P4 283 aa13.92□□□□□ -0.18
RPAIN-214ENST00000574003 ZAP70P43403 619 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms