RNA–Protein interactions for RNA: ENST00000573924.1

RPA1-205, Transcript of replication protein A1, humanhuman

TSL 4

Gene RPA1, Length 574 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-205ENST00000573924 NR2E3Q9Y5X4 410 aa9.14□□□□□ -0.95
RPA1-205ENST00000573924 COL4A1P02462 1669 aa9.13□□□□□ -0.95
RPA1-205ENST00000573924 APAF1O14727 1248 aa9.13□□□□□ -0.95
RPA1-205ENST00000573924 USP2O75604 605 aaPredicted RBP9.13□□□□□ -0.95
RPA1-205ENST00000573924 CSF1RP07333 972 aa9.13□□□□□ -0.95
RPA1-205ENST00000573924 FKBP5Q13451 457 aaPredicted RBP9.13□□□□□ -0.95
RPA1-205ENST00000573924 CWF19L2Q2TBE0 894 aaKnown RBP9.13□□□□□ -0.95
RPA1-205ENST00000573924 NBPF12Q5TAG4 269 aaPredicted RBP9.13□□□□□ -0.95
RPA1-205ENST00000573924 DCAF15Q66K64 600 aa9.13□□□□□ -0.95
RPA1-205ENST00000573924 VPS37DQ86XT2 251 aa9.13□□□□□ -0.95
RPA1-205ENST00000573924 PARP9Q8IXQ6 854 aa9.13□□□□□ -0.95
RPA1-205ENST00000573924 C8orf58Q8NAV2 365 aa9.13□□□□□ -0.95
RPA1-205ENST00000573924 OXER1Q8TDS5 423 aa9.13□□□□□ -0.95
RPA1-205ENST00000573924 ELP3Q9H9T3 547 aa9.13□□□□□ -0.95
RPA1-205ENST00000573924 ECM29Q5VYK3 1845 aa9.12□□□□□ -0.95
RPA1-205ENST00000573924 LAMB1P07942 1786 aa9.12□□□□□ -0.95
RPA1-205ENST00000573924 MAST3O60307 1309 aa9.12□□□□□ -0.95
RPA1-205ENST00000573924 TLR2O60603 784 aa9.12□□□□□ -0.95
RPA1-205ENST00000573924 FRAT2O75474 233 aaPredicted RBP9.12□□□□□ -0.95
RPA1-205ENST00000573924 SNAPC2Q13487 334 aa9.12□□□□□ -0.95
RPA1-205ENST00000573924 TWISTNBQ3B726 338 aaPredicted RBP9.12□□□□□ -0.95
RPA1-205ENST00000573924 MFSD14BQ5SR56 506 aa9.12□□□□□ -0.95
RPA1-205ENST00000573924 LDHAL6AQ6ZMR3 332 aa9.12□□□□□ -0.95
RPA1-205ENST00000573924 ERO1BQ86YB8 467 aa9.12□□□□□ -0.95
RPA1-205ENST00000573924 TBC1D22AQ8WUA7 517 aa9.12□□□□□ -0.95
RPA1-205ENST00000573924 DNAAF4Q8WXU2 420 aa9.12□□□□□ -0.95
RPA1-205ENST00000573924 DPF3Q92784 378 aa9.12□□□□□ -0.95
RPA1-205ENST00000573924 PRMT6Q96LA8 375 aaPredicted RBP9.12□□□□□ -0.95
RPA1-205ENST00000573924 CNNM1Q9NRU3 951 aa9.12□□□□□ -0.95
RPA1-205ENST00000573924 TTF2Q9UNY4 1162 aaKnown RBP9.12□□□□□ -0.95
RPA1-205ENST00000573924 COLQQ9Y215 455 aaPredicted RBP9.12□□□□□ -0.95
RPA1-205ENST00000573924 FAM205AQ6ZU69 1335 aa9.11□□□□□ -0.95
RPA1-205ENST00000573924 UBXN2AP68543 259 aa9.11□□□□□ -0.95
RPA1-205ENST00000573924 LACTBP83111 547 aaPredicted RBP9.11□□□□□ -0.95
RPA1-205ENST00000573924 HDLBPQ00341 1268 aaKnown RBP9.11□□□□□ -0.95
RPA1-205ENST00000573924 UBE4AQ14139 1066 aa9.11□□□□□ -0.95
RPA1-205ENST00000573924 CAVIN4Q5BKX8 364 aa9.11□□□□□ -0.95
RPA1-205ENST00000573924 CERS5Q8N5B7 392 aa9.11□□□□□ -0.95
RPA1-205ENST00000573924 RAET1EQ8TD07 263 aa9.11□□□□□ -0.95
RPA1-205ENST00000573924 OTUD5Q96G74 571 aa9.11□□□□□ -0.95
RPA1-205ENST00000573924 TRIM47Q96LD4 638 aa9.11□□□□□ -0.95
RPA1-205ENST00000573924 ZNF70Q9UC06 446 aaPredicted RBP9.11□□□□□ -0.95
RPA1-205ENST00000573924 PTCH2Q9Y6C5 1203 aa9.11□□□□□ -0.95
RPA1-205ENST00000573924 KIAA0100Q14667 2235 aaKnown RBP9.11□□□□□ -0.95
RPA1-205ENST00000573924 SPEF2Q9C093 1822 aa9.1□□□□□ -0.95
RPA1-205ENST00000573924 A0A1W2PPC1 479 aa9.1□□□□□ -0.95
RPA1-205ENST00000573924 WTIPA6NIX2 430 aaPredicted RBP9.1□□□□□ -0.95
RPA1-205ENST00000573924 SPDYE5A6NIY4 337 aa9.1□□□□□ -0.95
RPA1-205ENST00000573924 H0YGN5 161 aa9.1□□□□□ -0.95
RPA1-205ENST00000573924 GALR2O43603 387 aaPredicted RBP9.1□□□□□ -0.95
RPA1-205ENST00000573924 TAF5LO75529 589 aa9.1□□□□□ -0.95
RPA1-205ENST00000573924 HIBADHP31937 336 aaKnown RBP9.1□□□□□ -0.95
RPA1-205ENST00000573924 VGLL4Q14135 290 aa9.1□□□□□ -0.95
RPA1-205ENST00000573924 FKBP1CQ5VVH2 108 aa9.1□□□□□ -0.95
RPA1-205ENST00000573924 DZIP1LQ8IYY4 767 aaKnown RBP9.1□□□□□ -0.95
RPA1-205ENST00000573924 BRI3BPQ8WY22 251 aa9.1□□□□□ -0.95
RPA1-205ENST00000573924 TEKT1Q969V4 418 aa9.1□□□□□ -0.95
RPA1-205ENST00000573924 PTPN18Q99952 460 aa9.1□□□□□ -0.95
RPA1-205ENST00000573924 BIN2Q9UBW5 565 aaPredicted RBP9.1□□□□□ -0.95
RPA1-205ENST00000573924 FZD1Q9UP38 647 aa9.1□□□□□ -0.95
RPA1-205ENST00000573924 IL16Q14005 1332 aa9.09□□□□□ -0.95
RPA1-205ENST00000573924 SSC5DA1L4H1 1573 aa9.09□□□□□ -0.95
RPA1-205ENST00000573924 PLIN1O60240 522 aa9.09□□□□□ -0.95
RPA1-205ENST00000573924 KLRK1P26718 216 aa9.09□□□□□ -0.95
RPA1-205ENST00000573924 PPATQ06203 517 aa9.09□□□□□ -0.95
RPA1-205ENST00000573924 DDX10Q13206 875 aaKnown RBP9.09□□□□□ -0.95
RPA1-205ENST00000573924 PPIL2Q13356 520 aa9.09□□□□□ -0.95
RPA1-205ENST00000573924 CCDC27Q2M243 656 aa9.09□□□□□ -0.95
RPA1-205ENST00000573924 FAM83AQ86UY5 434 aa9.09□□□□□ -0.95
RPA1-205ENST00000573924 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.09□□□□□ -0.95
RPA1-205ENST00000573924 MRIQ9BWK5 157 aa9.09□□□□□ -0.95
RPA1-205ENST00000573924 TDRD3Q9H7E2 651 aaKnown RBP9.09□□□□□ -0.95
RPA1-205ENST00000573924 C9orf78Q9NZ63 289 aaPredicted RBP9.09□□□□□ -0.95
RPA1-205ENST00000573924 SUGT1Q9Y2Z0 365 aa9.09□□□□□ -0.95
RPA1-205ENST00000573924 MROH5Q6ZUA9 1318 aa9.08□□□□□ -0.96
RPA1-205ENST00000573924 TCP10L2B9ZVM9 353 aa9.08□□□□□ -0.96
RPA1-205ENST00000573924 FMNL1O95466 1100 aaPredicted RBP9.08□□□□□ -0.96
RPA1-205ENST00000573924 PLCG2P16885 1265 aa9.08□□□□□ -0.96
RPA1-205ENST00000573924 GRK4P32298 578 aa9.08□□□□□ -0.96
RPA1-205ENST00000573924 GJA5P36382 358 aa9.08□□□□□ -0.96
RPA1-205ENST00000573924 CRKP46108 304 aa9.08□□□□□ -0.96
RPA1-205ENST00000573924 PTGDRQ13258 359 aa9.08□□□□□ -0.96
RPA1-205ENST00000573924 ASTLQ6HA08 431 aaPredicted RBP9.08□□□□□ -0.96
RPA1-205ENST00000573924 LMBR1LQ6UX01 489 aa9.08□□□□□ -0.96
RPA1-205ENST00000573924 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.08□□□□□ -0.96
RPA1-205ENST00000573924 TDRD7Q8NHU6 1098 aaKnown RBP9.08□□□□□ -0.96
RPA1-205ENST00000573924 WRNIP1Q96S55 665 aa9.08□□□□□ -0.96
RPA1-205ENST00000573924 ZNF341Q9BYN7 854 aa9.08□□□□□ -0.96
RPA1-205ENST00000573924 ZNF646O15015 1829 aaPredicted RBP9.08□□□□□ -0.96
RPA1-205ENST00000573924 GJB1P08034 283 aa9.07□□□□□ -0.96
RPA1-205ENST00000573924 ZEB1P37275 1124 aaPredicted RBP9.07□□□□□ -0.96
RPA1-205ENST00000573924 ATN1P54259 1190 aaPredicted RBP9.07□□□□□ -0.96
RPA1-205ENST00000573924 CASP7P55210 303 aa9.07□□□□□ -0.96
RPA1-205ENST00000573924 FCGRTP55899 365 aa9.07□□□□□ -0.96
RPA1-205ENST00000573924 ANKRD23Q86SG2 305 aa9.07□□□□□ -0.96
RPA1-205ENST00000573924 FAM43AQ8N2R8 423 aa9.07□□□□□ -0.96
RPA1-205ENST00000573924 TSPYL6Q8N831 410 aa9.07□□□□□ -0.96
RPA1-205ENST00000573924 SLAIN1Q8ND83 568 aa9.07□□□□□ -0.96
RPA1-205ENST00000573924 SLC17A8Q8NDX2 589 aa9.07□□□□□ -0.96
RPA1-205ENST00000573924 SH3TC2Q8TF17 1288 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms