RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 KIF22Q14807 665 aa15.17■□□□□ 0.02
CCDC40-210ENST00000573903 FAM43AQ8N2R8 423 aa15.17■□□□□ 0.02
CCDC40-210ENST00000573903 ZCCHC17Q9NP64 241 aaKnown RBP15.17■□□□□ 0.02
CCDC40-210ENST00000573903 LDHBP07195 334 aaKnown RBP15.16■□□□□ 0.02
CCDC40-210ENST00000573903 PPIL2Q13356 520 aa15.16■□□□□ 0.02
CCDC40-210ENST00000573903 ATG9AQ7Z3C6 839 aa15.16■□□□□ 0.02
CCDC40-210ENST00000573903 NBPF11Q86T75 865 aa15.16■□□□□ 0.02
CCDC40-210ENST00000573903 FAM151AQ8WW52 585 aa15.16■□□□□ 0.02
CCDC40-210ENST00000573903 ZKSCAN4Q969J2 545 aaPredicted RBP15.16■□□□□ 0.02
CCDC40-210ENST00000573903 ARMC5Q96C12 935 aa15.16■□□□□ 0.02
CCDC40-210ENST00000573903 CDCA7LQ96GN5 454 aa15.16■□□□□ 0.02
CCDC40-210ENST00000573903 TMEM106CQ9BVX2 250 aa15.16■□□□□ 0.02
CCDC40-210ENST00000573903 DENND2AQ9ULE3 1009 aa15.16■□□□□ 0.02
CCDC40-210ENST00000573903 DAGLAQ9Y4D2 1042 aa15.16■□□□□ 0.02
CCDC40-210ENST00000573903 SEMA3EO15041 775 aa15.15■□□□□ 0.02
CCDC40-210ENST00000573903 IL15P40933 162 aaPredicted RBP15.15■□□□□ 0.02
CCDC40-210ENST00000573903 PPATQ06203 517 aa15.15■□□□□ 0.02
CCDC40-210ENST00000573903 SLC9C1Q4G0N8 1177 aa15.15■□□□□ 0.02
CCDC40-210ENST00000573903 MIGA2Q7L4E1 593 aa15.15■□□□□ 0.02
CCDC40-210ENST00000573903 ZGPATQ8N5A5 531 aaKnown RBP15.15■□□□□ 0.02
CCDC40-210ENST00000573903 NOB1Q9ULX3 412 aaKnown RBP15.15■□□□□ 0.02
CCDC40-210ENST00000573903 POTEFA5A3E0 1075 aa15.14■□□□□ 0.01
CCDC40-210ENST00000573903 IRF6O14896 467 aa15.14■□□□□ 0.01
CCDC40-210ENST00000573903 TLR2O60603 784 aa15.14■□□□□ 0.01
CCDC40-210ENST00000573903 PRDX5P30044 214 aa15.14■□□□□ 0.01
CCDC40-210ENST00000573903 TCP10Q12799 353 aa15.14■□□□□ 0.01
CCDC40-210ENST00000573903 DIXDC1Q155Q3 683 aa15.14■□□□□ 0.01
CCDC40-210ENST00000573903 GCC1Q96CN9 775 aa15.14■□□□□ 0.01
CCDC40-210ENST00000573903 LRRFIP2Q9Y608 721 aaKnown RBP15.14■□□□□ 0.01
CCDC40-210ENST00000573903 SALL1Q9NSC2 1324 aa15.14■□□□□ 0.01
CCDC40-210ENST00000573903 DOCK2Q92608 1830 aa15.13■□□□□ 0.01
CCDC40-210ENST00000573903 BTBD19C9JJ37 291 aa15.13■□□□□ 0.01
CCDC40-210ENST00000573903 CDC42EP5Q6NZY7 148 aa15.13■□□□□ 0.01
CCDC40-210ENST00000573903 USP40Q9NVE5 1235 aa15.13■□□□□ 0.01
CCDC40-210ENST00000573903 MYH2Q9UKX2 1941 aa15.13■□□□□ 0.01
CCDC40-210ENST00000573903 GNRH1P01148 92 aa15.12■□□□□ 0.01
CCDC40-210ENST00000573903 INPP5BP32019 993 aa15.12■□□□□ 0.01
CCDC40-210ENST00000573903 PHKA1P46020 1223 aa15.12■□□□□ 0.01
CCDC40-210ENST00000573903 DZIP1Q86YF9 867 aaKnown RBP15.12■□□□□ 0.01
CCDC40-210ENST00000573903 SLF2Q8IX21 1173 aa15.12■□□□□ 0.01
CCDC40-210ENST00000573903 TRMT2AQ8IZ69 625 aaKnown RBP15.12■□□□□ 0.01
CCDC40-210ENST00000573903 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.12■□□□□ 0.01
CCDC40-210ENST00000573903 PA2G4Q9UQ80 394 aaKnown RBP15.12■□□□□ 0.01
CCDC40-210ENST00000573903 PTCH2Q9Y6C5 1203 aa15.12■□□□□ 0.01
CCDC40-210ENST00000573903 GNAI3P08754 354 aa15.11■□□□□ 0.01
CCDC40-210ENST00000573903 PRMT2P55345 433 aa15.11■□□□□ 0.01
CCDC40-210ENST00000573903 LACTBP83111 547 aaPredicted RBP15.11■□□□□ 0.01
CCDC40-210ENST00000573903 SLC4A8Q2Y0W8 1093 aa15.11■□□□□ 0.01
CCDC40-210ENST00000573903 ANKRD23Q86SG2 305 aa15.11■□□□□ 0.01
CCDC40-210ENST00000573903 ZNF333Q96JL9 665 aa15.11■□□□□ 0.01
CCDC40-210ENST00000573903 COPRSQ9NQ92 184 aa15.11■□□□□ 0.01
CCDC40-210ENST00000573903 PCDH10Q9P2E7 1040 aa15.11■□□□□ 0.01
CCDC40-210ENST00000573903 AKAP2Q9Y2D5 859 aa15.11■□□□□ 0.01
CCDC40-210ENST00000573903 NFIAQ12857 509 aa15.1■□□□□ 0.01
CCDC40-210ENST00000573903 NOL9Q5SY16 702 aaKnown RBP15.1■□□□□ 0.01
CCDC40-210ENST00000573903 SPTY2D1Q68D10 685 aaPredicted RBP15.1■□□□□ 0.01
CCDC40-210ENST00000573903 CCDC102BQ68D86 513 aa15.1■□□□□ 0.01
CCDC40-210ENST00000573903 ZSCAN29Q8IWY8 852 aaPredicted RBP15.1■□□□□ 0.01
CCDC40-210ENST00000573903 MEIS3Q99687 375 aa15.1■□□□□ 0.01
CCDC40-210ENST00000573903 ABCF2Q9UG63 623 aa15.1■□□□□ 0.01
CCDC40-210ENST00000573903 ZNF112Q9UJU3 913 aa15.1■□□□□ 0.01
CCDC40-210ENST00000573903 ZSWIM8A7E2V4 1837 aa15.09■□□□□ 0.01
CCDC40-210ENST00000573903 PDHXO00330 501 aa15.09■□□□□ 0.01
CCDC40-210ENST00000573903 SRGAP3O43295 1099 aa15.09■□□□□ 0.01
CCDC40-210ENST00000573903 EN2P19622 333 aaPredicted RBP15.09■□□□□ 0.01
CCDC40-210ENST00000573903 CAP1Q01518 475 aa15.09■□□□□ 0.01
CCDC40-210ENST00000573903 MVPQ14764 893 aaKnown RBP15.09■□□□□ 0.01
CCDC40-210ENST00000573903 PICK1Q9NRD5 415 aa15.09■□□□□ 0.01
CCDC40-210ENST00000573903 FAM198AQ9UFP1 575 aa15.09■□□□□ 0.01
CCDC40-210ENST00000573903 KCNH4Q9UQ05 1017 aa15.09■□□□□ 0.01
CCDC40-210ENST00000573903 HTTP42858 3142 aa15.09■□□□□ 0.01
CCDC40-210ENST00000573903 ZBTB22O15209 634 aa15.08■□□□□ 0
CCDC40-210ENST00000573903 ENTPD3O75355 529 aa15.08■□□□□ 0
CCDC40-210ENST00000573903 HOXD10P28358 340 aa15.08■□□□□ 0
CCDC40-210ENST00000573903 ADORA1P30542 326 aa15.08■□□□□ 0
CCDC40-210ENST00000573903 RGS3P49796 1198 aa15.08■□□□□ 0
CCDC40-210ENST00000573903 RARSP54136 660 aaKnown RBP15.08■□□□□ 0
CCDC40-210ENST00000573903 ARHGAP45Q92619 1136 aa15.08■□□□□ 0
CCDC40-210ENST00000573903 PARK7Q99497 189 aaKnown RBP15.08■□□□□ 0
CCDC40-210ENST00000573903 ARHGAP39Q9C0H5 1083 aa15.08■□□□□ 0
CCDC40-210ENST00000573903 CPA4Q9UI42 421 aa15.08■□□□□ 0
CCDC40-210ENST00000573903 PDS5AQ29RF7 1337 aaKnown RBP15.08■□□□□ 0
CCDC40-210ENST00000573903 KIAA0100Q14667 2235 aaKnown RBP15.07■□□□□ 0
CCDC40-210ENST00000573903 A0A1B0GUL7 405 aa15.07■□□□□ 0
CCDC40-210ENST00000573903 IPO8O15397 1037 aaKnown RBP15.07■□□□□ 0
CCDC40-210ENST00000573903 ECM2O94769 699 aaPredicted RBP15.07■□□□□ 0
CCDC40-210ENST00000573903 MYCP01106 439 aaPredicted RBP15.07■□□□□ 0
CCDC40-210ENST00000573903 RASGRF1Q13972 1273 aa15.07■□□□□ 0
CCDC40-210ENST00000573903 GORABQ5T7V8 394 aa15.07■□□□□ 0
CCDC40-210ENST00000573903 C17orf99Q6UX52 265 aa15.07■□□□□ 0
CCDC40-210ENST00000573903 IDI2Q9BXS1 227 aa15.07■□□□□ 0
CCDC40-210ENST00000573903 GAKO14976 1311 aa15.07■□□□□ 0
CCDC40-210ENST00000573903 DOCK1Q14185 1865 aa15.06■□□□□ 0
CCDC40-210ENST00000573903 CXCL11O14625 94 aa15.06■□□□□ 0
CCDC40-210ENST00000573903 FMNL1O95466 1100 aaPredicted RBP15.06■□□□□ 0
CCDC40-210ENST00000573903 BTDP43251 543 aa15.06■□□□□ 0
CCDC40-210ENST00000573903 PSMC4P43686 418 aa15.06■□□□□ 0
CCDC40-210ENST00000573903 TIMM10P62072 90 aa15.06■□□□□ 0
CCDC40-210ENST00000573903 ERICH6Q7L0X2 663 aa15.06■□□□□ 0
CCDC40-210ENST00000573903 SCYL3Q8IZE3 742 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms