RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 PANK1Q8TE04 598 aa21.56■■□□□ 1.04
SMG6-214ENST00000573827 FAM198AQ9UFP1 575 aa21.56■■□□□ 1.04
SMG6-214ENST00000573827 NOP58Q9Y2X3 529 aaKnown RBP21.56■■□□□ 1.04
SMG6-214ENST00000573827 TESPA1A2RU30 521 aaPredicted RBP21.55■■□□□ 1.04
SMG6-214ENST00000573827 MANSC4A6NHS7 340 aaPredicted RBP21.55■■□□□ 1.04
SMG6-214ENST00000573827 ARID4AP29374 1257 aaPredicted RBP21.55■■□□□ 1.04
SMG6-214ENST00000573827 VGLL4Q14135 290 aa21.55■■□□□ 1.04
SMG6-214ENST00000573827 PI16Q6UXB8 463 aa21.55■■□□□ 1.04
SMG6-214ENST00000573827 ITPRIPQ8IWB1 547 aa21.55■■□□□ 1.04
SMG6-214ENST00000573827 CNKSR2Q8WXI2 1034 aa21.55■■□□□ 1.04
SMG6-214ENST00000573827 FAM163AQ96GL9 167 aaPredicted RBP21.55■■□□□ 1.04
SMG6-214ENST00000573827 HMG20BQ9P0W2 317 aa21.55■■□□□ 1.04
SMG6-214ENST00000573827 MAP3K9P80192 1104 aa21.54■■□□□ 1.04
SMG6-214ENST00000573827 G3BP1Q13283 466 aaKnown RBP eCLIP21.54■■□□□ 1.04
SMG6-214ENST00000573827 DGKZQ13574 1117 aa21.54■■□□□ 1.04
SMG6-214ENST00000573827 IFNL1Q8IU54 200 aa21.54■■□□□ 1.04
SMG6-214ENST00000573827 FAM151AQ8WW52 585 aa21.54■■□□□ 1.04
SMG6-214ENST00000573827 MS4A4AQ96JQ5 239 aa21.54■■□□□ 1.04
SMG6-214ENST00000573827 PTPN18Q99952 460 aa21.54■■□□□ 1.04
SMG6-214ENST00000573827 ELP3Q9H9T3 547 aa21.54■■□□□ 1.04
SMG6-214ENST00000573827 GPR108Q9NPR9 543 aa21.54■■□□□ 1.04
SMG6-214ENST00000573827 TMOD2Q9NZR1 351 aa21.54■■□□□ 1.04
SMG6-214ENST00000573827 MYH2Q9UKX2 1941 aa21.53■■□□□ 1.04
SMG6-214ENST00000573827 ATRNL1Q5VV63 1379 aa21.53■■□□□ 1.04
SMG6-214ENST00000573827 INHBEP58166 350 aa21.53■■□□□ 1.04
SMG6-214ENST00000573827 ZNF296Q8WUU4 475 aaPredicted RBP21.53■■□□□ 1.04
SMG6-214ENST00000573827 NEUROD6Q96NK8 337 aa21.53■■□□□ 1.04
SMG6-214ENST00000573827 SNCAIPQ9Y6H5 919 aa21.53■■□□□ 1.04
SMG6-214ENST00000573827 GPR25O00155 361 aa21.52■■□□□ 1.04
SMG6-214ENST00000573827 CEP85Q6P2H3 762 aa21.52■■□□□ 1.04
SMG6-214ENST00000573827 ZFPM1Q8IX07 1006 aa21.52■■□□□ 1.04
SMG6-214ENST00000573827 ZGPATQ8N5A5 531 aaKnown RBP21.52■■□□□ 1.04
SMG6-214ENST00000573827 OPTNQ96CV9 577 aa21.52■■□□□ 1.04
SMG6-214ENST00000573827 CENPFP49454 3210 aa21.51■■□□□ 1.03
SMG6-214ENST00000573827 MCAMP43121 646 aa21.51■■□□□ 1.03
SMG6-214ENST00000573827 TNNI3KQ59H18 835 aa21.51■■□□□ 1.03
SMG6-214ENST00000573827 SPATA5Q8NB90 893 aa21.51■■□□□ 1.03
SMG6-214ENST00000573827 IDI2Q9BXS1 227 aa21.51■■□□□ 1.03
SMG6-214ENST00000573827 USP40Q9NVE5 1235 aa21.51■■□□□ 1.03
SMG6-214ENST00000573827 FPGT-TNNI3KV9GXZ4 949 aa21.51■■□□□ 1.03
SMG6-214ENST00000573827 MECOMQ03112 1051 aa21.5■■□□□ 1.03
SMG6-214ENST00000573827 CTU1Q7Z7A3 348 aaKnown RBP21.5■■□□□ 1.03
SMG6-214ENST00000573827 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.5■■□□□ 1.03
SMG6-214ENST00000573827 ABCF2Q9UG63 623 aa21.5■■□□□ 1.03
SMG6-214ENST00000573827 ZNF112Q9UJU3 913 aa21.5■■□□□ 1.03
SMG6-214ENST00000573827 SPDYE5A6NIY4 337 aa21.49■■□□□ 1.03
SMG6-214ENST00000573827 SURF6O75683 361 aaKnown RBP21.49■■□□□ 1.03
SMG6-214ENST00000573827 WDHD1O75717 1129 aaPredicted RBP21.49■■□□□ 1.03
SMG6-214ENST00000573827 ALDH1A1P00352 501 aa21.49■■□□□ 1.03
SMG6-214ENST00000573827 TCP10Q12799 353 aa21.49■■□□□ 1.03
SMG6-214ENST00000573827 TBC1D9Q6ZT07 1266 aa21.49■■□□□ 1.03
SMG6-214ENST00000573827 SH3BP5LQ7L8J4 393 aa21.49■■□□□ 1.03
SMG6-214ENST00000573827 BRI3BPQ8WY22 251 aa21.49■■□□□ 1.03
SMG6-214ENST00000573827 ZKSCAN4Q969J2 545 aaPredicted RBP21.49■■□□□ 1.03
SMG6-214ENST00000573827 DBNDD2Q9BQY9 259 aa21.49■■□□□ 1.03
SMG6-214ENST00000573827 GPR75-ASB3A0A0A6YYF3 556 aa21.48■■□□□ 1.03
SMG6-214ENST00000573827 RHBDL3P58872 404 aa21.48■■□□□ 1.03
SMG6-214ENST00000573827 MIGA2Q7L4E1 593 aa21.48■■□□□ 1.03
SMG6-214ENST00000573827 NSUN4Q96CB9 384 aaKnown RBP21.48■■□□□ 1.03
SMG6-214ENST00000573827 WRNIP1Q96S55 665 aa21.48■■□□□ 1.03
SMG6-214ENST00000573827 DDX4Q9NQI0 724 aaKnown RBP21.48■■□□□ 1.03
SMG6-214ENST00000573827 MROH7-TTC4A0A0A0MT08 1334 aa21.48■■□□□ 1.03
SMG6-214ENST00000573827 INPP5BP32019 993 aa21.47■■□□□ 1.03
SMG6-214ENST00000573827 RGS3P49796 1198 aa21.47■■□□□ 1.03
SMG6-214ENST00000573827 SPTY2D1Q68D10 685 aaPredicted RBP21.47■■□□□ 1.03
SMG6-214ENST00000573827 DZIP1Q86YF9 867 aaKnown RBP21.47■■□□□ 1.03
SMG6-214ENST00000573827 DBNLQ9UJU6 430 aaKnown RBP21.47■■□□□ 1.03
SMG6-214ENST00000573827 TNRC18O15417 2968 aaPredicted RBP21.46■■□□□ 1.03
SMG6-214ENST00000573827 ENTPD3O75355 529 aa21.46■■□□□ 1.03
SMG6-214ENST00000573827 UQCRFS1P1P0C7P4 283 aa21.46■■□□□ 1.03
SMG6-214ENST00000573827 BTDP43251 543 aa21.46■■□□□ 1.03
SMG6-214ENST00000573827 MAP3K10Q02779 954 aa21.46■■□□□ 1.03
SMG6-214ENST00000573827 DCAF15Q66K64 600 aa21.46■■□□□ 1.03
SMG6-214ENST00000573827 ERICH6Q7L0X2 663 aa21.46■■□□□ 1.03
SMG6-214ENST00000573827 EAF2Q96CJ1 260 aaPredicted RBP21.46■■□□□ 1.03
SMG6-214ENST00000573827 HOOK2Q96ED9 719 aa21.46■■□□□ 1.03
SMG6-214ENST00000573827 ZNF512BQ96KM6 892 aaPredicted RBP21.46■■□□□ 1.03
SMG6-214ENST00000573827 ZNF341Q9BYN7 854 aa21.46■■□□□ 1.03
SMG6-214ENST00000573827 TLR7Q9NYK1 1049 aaKnown RBP21.46■■□□□ 1.03
SMG6-214ENST00000573827 CSADQ9Y600 493 aa21.46■■□□□ 1.03
SMG6-214ENST00000573827 GORABQ5T7V8 394 aa21.45■■□□□ 1.02
SMG6-214ENST00000573827 ERO1BQ86YB8 467 aa21.45■■□□□ 1.02
SMG6-214ENST00000573827 SIRT2Q8IXJ6 389 aa21.45■■□□□ 1.02
SMG6-214ENST00000573827 OTUD5Q96G74 571 aa21.45■■□□□ 1.02
SMG6-214ENST00000573827 ZBTB40Q9NUA8 1239 aa21.45■■□□□ 1.02
SMG6-214ENST00000573827 CCDC85CA6NKD9 419 aa21.44■■□□□ 1.02
SMG6-214ENST00000573827 PHF20L1A8MW92 1017 aa21.44■■□□□ 1.02
SMG6-214ENST00000573827 FKTNO75072 461 aa21.44■■□□□ 1.02
SMG6-214ENST00000573827 RGS19P49795 217 aa21.44■■□□□ 1.02
SMG6-214ENST00000573827 CAP1Q01518 475 aa21.44■■□□□ 1.02
SMG6-214ENST00000573827 CRHR2Q13324 411 aa21.44■■□□□ 1.02
SMG6-214ENST00000573827 RCAN3Q9UKA8 241 aa21.44■■□□□ 1.02
SMG6-214ENST00000573827 BRCA2P51587 3418 aa21.43■■□□□ 1.02
SMG6-214ENST00000573827 DDTLA6NHG4 134 aaPredicted RBP21.43■■□□□ 1.02
SMG6-214ENST00000573827 IRF6O14896 467 aa21.43■■□□□ 1.02
SMG6-214ENST00000573827 NPM3O75607 178 aaKnown RBP21.43■■□□□ 1.02
SMG6-214ENST00000573827 SLURP2P0DP57 97 aa21.43■■□□□ 1.02
SMG6-214ENST00000573827 GTF2A2P52657 109 aa21.43■■□□□ 1.02
SMG6-214ENST00000573827 PPIL2Q13356 520 aa21.43■■□□□ 1.02
SMG6-214ENST00000573827 OS9Q13438 667 aaPredicted RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms