RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 MCAMP43121 646 aa16.53■□□□□ 0.24
RPAIN-213ENST00000573577 TTLL12Q14166 644 aaPredicted RBP16.53■□□□□ 0.24
RPAIN-213ENST00000573577 SPTY2D1Q68D10 685 aaPredicted RBP16.53■□□□□ 0.24
RPAIN-213ENST00000573577 MOB2Q70IA6 237 aa16.53■□□□□ 0.24
RPAIN-213ENST00000573577 TLR7Q9NYK1 1049 aaKnown RBP16.53■□□□□ 0.24
RPAIN-213ENST00000573577 ABCF2Q9UG63 623 aa16.53■□□□□ 0.24
RPAIN-213ENST00000573577 DAGLAQ9Y4D2 1042 aa16.53■□□□□ 0.24
RPAIN-213ENST00000573577 SSC5DA1L4H1 1573 aa16.52■□□□□ 0.24
RPAIN-213ENST00000573577 TCP10L2B9ZVM9 353 aa16.52■□□□□ 0.24
RPAIN-213ENST00000573577 AOC2O75106 756 aa16.52■□□□□ 0.24
RPAIN-213ENST00000573577 MAP2K2P36507 400 aa16.52■□□□□ 0.24
RPAIN-213ENST00000573577 ZNF157P51786 506 aaPredicted RBP16.52■□□□□ 0.24
RPAIN-213ENST00000573577 MAP2K1Q02750 393 aaPredicted RBP16.52■□□□□ 0.24
RPAIN-213ENST00000573577 NOGQ13253 232 aa16.52■□□□□ 0.24
RPAIN-213ENST00000573577 DZIP1Q86YF9 867 aaKnown RBP16.52■□□□□ 0.24
RPAIN-213ENST00000573577 CCDC102AQ96A19 550 aa16.52■□□□□ 0.24
RPAIN-213ENST00000573577 GPATCH3Q96I76 525 aa16.52■□□□□ 0.24
RPAIN-213ENST00000573577 TMOD2Q9NZR1 351 aa16.52■□□□□ 0.24
RPAIN-213ENST00000573577 FAM155AB1AL88 458 aaPredicted RBP16.51■□□□□ 0.23
RPAIN-213ENST00000573577 UBE2Q2LH0YL09 131 aa16.51■□□□□ 0.23
RPAIN-213ENST00000573577 SMARCA5O60264 1052 aaPredicted RBP16.51■□□□□ 0.23
RPAIN-213ENST00000573577 TNNI2P48788 182 aa16.51■□□□□ 0.23
RPAIN-213ENST00000573577 CACNB3P54284 484 aa16.51■□□□□ 0.23
RPAIN-213ENST00000573577 PRKG1Q13976 671 aa16.51■□□□□ 0.23
RPAIN-213ENST00000573577 SUPT20HL1Q3ZLR7 823 aa16.51■□□□□ 0.23
RPAIN-213ENST00000573577 ARMC9Q7Z3E5 817 aa16.51■□□□□ 0.23
RPAIN-213ENST00000573577 WBP1LQ9NX94 342 aa16.51■□□□□ 0.23
RPAIN-213ENST00000573577 SLC10A3P09131 477 aa16.5■□□□□ 0.23
RPAIN-213ENST00000573577 NBPF12Q5TAG4 269 aaPredicted RBP16.5■□□□□ 0.23
RPAIN-213ENST00000573577 ANKRD45Q5TZF3 282 aa16.5■□□□□ 0.23
RPAIN-213ENST00000573577 FKBP1CQ5VVH2 108 aa16.5■□□□□ 0.23
RPAIN-213ENST00000573577 ERICH6Q7L0X2 663 aa16.5■□□□□ 0.23
RPAIN-213ENST00000573577 SLF2Q8IX21 1173 aa16.5■□□□□ 0.23
RPAIN-213ENST00000573577 SMC5Q8IY18 1101 aa16.5■□□□□ 0.23
RPAIN-213ENST00000573577 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.5■□□□□ 0.23
RPAIN-213ENST00000573577 TMEM39BQ9GZU3 492 aa16.5■□□□□ 0.23
RPAIN-213ENST00000573577 GAKO14976 1311 aa16.49■□□□□ 0.23
RPAIN-213ENST00000573577 PPP1R12BO60237 982 aaPredicted RBP16.49■□□□□ 0.23
RPAIN-213ENST00000573577 IGSF3O75054 1194 aa16.49■□□□□ 0.23
RPAIN-213ENST00000573577 IGHDP01880 384 aa16.49■□□□□ 0.23
RPAIN-213ENST00000573577 MECOMQ03112 1051 aa16.49■□□□□ 0.23
RPAIN-213ENST00000573577 CDC42EP5Q6NZY7 148 aa16.49■□□□□ 0.23
RPAIN-213ENST00000573577 TBC1D9Q6ZT07 1266 aa16.49■□□□□ 0.23
RPAIN-213ENST00000573577 FAM83AQ86UY5 434 aa16.49■□□□□ 0.23
RPAIN-213ENST00000573577 RASAL3Q86YV0 1011 aa16.49■□□□□ 0.23
RPAIN-213ENST00000573577 AIDAQ96BJ3 306 aa16.49■□□□□ 0.23
RPAIN-213ENST00000573577 TEPSINQ96N21 525 aa16.49■□□□□ 0.23
RPAIN-213ENST00000573577 SNRKQ9NRH2 765 aa16.49■□□□□ 0.23
RPAIN-213ENST00000573577 ANGEL1Q9UNK9 670 aaKnown RBP16.49■□□□□ 0.23
RPAIN-213ENST00000573577 FZD1Q9UP38 647 aa16.49■□□□□ 0.23
RPAIN-213ENST00000573577 MAP3K11Q16584 847 aa16.48■□□□□ 0.23
RPAIN-213ENST00000573577 LDLRAD1Q5T700 205 aa16.48■□□□□ 0.23
RPAIN-213ENST00000573577 CDAN1Q8IWY9 1227 aa16.48■□□□□ 0.23
RPAIN-213ENST00000573577 FAM163AQ96GL9 167 aaPredicted RBP16.48■□□□□ 0.23
RPAIN-213ENST00000573577 MROH7-TTC4A0A0A0MT08 1334 aa16.47■□□□□ 0.23
RPAIN-213ENST00000573577 FOXN1O15353 648 aa16.47■□□□□ 0.23
RPAIN-213ENST00000573577 ATP5JP18859 108 aa16.47■□□□□ 0.23
RPAIN-213ENST00000573577 GSTO1P78417 241 aa16.47■□□□□ 0.23
RPAIN-213ENST00000573577 ZNF384Q8TF68 577 aa16.47■□□□□ 0.23
RPAIN-213ENST00000573577 NSUN4Q96CB9 384 aaKnown RBP16.47■□□□□ 0.23
RPAIN-213ENST00000573577 ZIC5Q96T25 663 aa16.47■□□□□ 0.23
RPAIN-213ENST00000573577 ECHDC1Q9NTX5 307 aa16.47■□□□□ 0.23
RPAIN-213ENST00000573577 USP40Q9NVE5 1235 aa16.47■□□□□ 0.23
RPAIN-213ENST00000573577 RAI14Q9P0K7 980 aa16.47■□□□□ 0.23
RPAIN-213ENST00000573577 LRP2BPQ9P2M1 347 aa16.47■□□□□ 0.23
RPAIN-213ENST00000573577 RPAP1Q9BWH6 1393 aaPredicted RBP16.47■□□□□ 0.23
RPAIN-213ENST00000573577 CYP2E1P05181 493 aaPredicted RBP16.46■□□□□ 0.23
RPAIN-213ENST00000573577 ZAP70P43403 619 aa16.46■□□□□ 0.23
RPAIN-213ENST00000573577 TTF1Q15361 905 aaPredicted RBP16.46■□□□□ 0.23
RPAIN-213ENST00000573577 BEGAINQ9BUH8 593 aa16.46■□□□□ 0.23
RPAIN-213ENST00000573577 TTC41PQ6P2S7 1318 aa16.45■□□□□ 0.22
RPAIN-213ENST00000573577 AKAP11Q9UKA4 1901 aa16.45■□□□□ 0.22
RPAIN-213ENST00000573577 UNCXA6NJT0 531 aa16.45■□□□□ 0.22
RPAIN-213ENST00000573577 ERC2O15083 957 aa16.45■□□□□ 0.22
RPAIN-213ENST00000573577 USP2O75604 605 aaPredicted RBP16.45■□□□□ 0.22
RPAIN-213ENST00000573577 LDHCP07864 332 aa16.45■□□□□ 0.22
RPAIN-213ENST00000573577 BTDP43251 543 aa16.45■□□□□ 0.22
RPAIN-213ENST00000573577 IREB2P48200 963 aaKnown RBP16.45■□□□□ 0.22
RPAIN-213ENST00000573577 KIF23Q02241 960 aaPredicted RBP16.45■□□□□ 0.22
RPAIN-213ENST00000573577 NFIAQ12857 509 aa16.45■□□□□ 0.22
RPAIN-213ENST00000573577 B4GALNT3Q6L9W6 998 aa16.45■□□□□ 0.22
RPAIN-213ENST00000573577 FAM151AQ8WW52 585 aa16.45■□□□□ 0.22
RPAIN-213ENST00000573577 MYH2Q9UKX2 1941 aa16.45■□□□□ 0.22
RPAIN-213ENST00000573577 RFX7Q2KHR2 1363 aa16.44■□□□□ 0.22
RPAIN-213ENST00000573577 GPR75-ASB3A0A0A6YYF3 556 aa16.44■□□□□ 0.22
RPAIN-213ENST00000573577 CTCFP49711 727 aaPredicted RBP16.44■□□□□ 0.22
RPAIN-213ENST00000573577 NUCB1Q02818 461 aa16.44■□□□□ 0.22
RPAIN-213ENST00000573577 TCP10Q12799 353 aa16.44■□□□□ 0.22
RPAIN-213ENST00000573577 TMED8Q6PL24 325 aaPredicted RBP16.44■□□□□ 0.22
RPAIN-213ENST00000573577 CHD1LQ86WJ1 897 aa16.44■□□□□ 0.22
RPAIN-213ENST00000573577 HOOK2Q96ED9 719 aa16.44■□□□□ 0.22
RPAIN-213ENST00000573577 DNAJC2Q99543 621 aaKnown RBP16.44■□□□□ 0.22
RPAIN-213ENST00000573577 IDI2Q9BXS1 227 aa16.44■□□□□ 0.22
RPAIN-213ENST00000573577 BOLA2Q9H3K6 86 aa16.44■□□□□ 0.22
RPAIN-213ENST00000573577 FAM198AQ9UFP1 575 aa16.44■□□□□ 0.22
RPAIN-213ENST00000573577 MAST2Q6P0Q8 1798 aa16.43■□□□□ 0.22
RPAIN-213ENST00000573577 MX1P20591 662 aa16.43■□□□□ 0.22
RPAIN-213ENST00000573577 MAP3K12Q12852 859 aa16.43■□□□□ 0.22
RPAIN-213ENST00000573577 ERICH6BQ5W0A0 696 aa16.43■□□□□ 0.22
RPAIN-213ENST00000573577 ANKRD13AQ8IZ07 590 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms