RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 TBC1D8O95759 1140 aa21.42■■□□□ 1.02
SMG6-212ENST00000573153 LDHBP07195 334 aaKnown RBP21.42■■□□□ 1.02
SMG6-212ENST00000573153 IREB2P48200 963 aaKnown RBP21.42■■□□□ 1.02
SMG6-212ENST00000573153 CEP85Q6P2H3 762 aa21.42■■□□□ 1.02
SMG6-212ENST00000573153 ITPRIPQ8IWB1 547 aa21.42■■□□□ 1.02
SMG6-212ENST00000573153 TNNI2P48788 182 aa21.41■■□□□ 1.02
SMG6-212ENST00000573153 VGLL4Q14135 290 aa21.41■■□□□ 1.02
SMG6-212ENST00000573153 MVPQ14764 893 aaKnown RBP21.41■■□□□ 1.02
SMG6-212ENST00000573153 NOM1Q5C9Z4 860 aaKnown RBP21.41■■□□□ 1.02
SMG6-212ENST00000573153 FTSJ3Q8IY81 847 aaKnown RBP21.41■■□□□ 1.02
SMG6-212ENST00000573153 SLC10A4Q96EP9 437 aa21.41■■□□□ 1.02
SMG6-212ENST00000573153 FAM163AQ96GL9 167 aaPredicted RBP21.41■■□□□ 1.02
SMG6-212ENST00000573153 MS4A4AQ96JQ5 239 aa21.41■■□□□ 1.02
SMG6-212ENST00000573153 PTPN18Q99952 460 aa21.41■■□□□ 1.02
SMG6-212ENST00000573153 GPR108Q9NPR9 543 aa21.41■■□□□ 1.02
SMG6-212ENST00000573153 SNCAIPQ9Y6H5 919 aa21.41■■□□□ 1.02
SMG6-212ENST00000573153 MCAMP43121 646 aa21.4■■□□□ 1.02
SMG6-212ENST00000573153 SREBF2Q12772 1141 aa21.4■■□□□ 1.02
SMG6-212ENST00000573153 TNNI3KQ59H18 835 aa21.4■■□□□ 1.02
SMG6-212ENST00000573153 ZFPM1Q8IX07 1006 aa21.4■■□□□ 1.02
SMG6-212ENST00000573153 FAM151AQ8WW52 585 aa21.4■■□□□ 1.02
SMG6-212ENST00000573153 ELP3Q9H9T3 547 aa21.4■■□□□ 1.02
SMG6-212ENST00000573153 FPGT-TNNI3KV9GXZ4 949 aa21.4■■□□□ 1.02
SMG6-212ENST00000573153 MANSC4A6NHS7 340 aaPredicted RBP21.39■■□□□ 1.01
SMG6-212ENST00000573153 G3BP1Q13283 466 aaKnown RBP eCLIP21.39■■□□□ 1.01
SMG6-212ENST00000573153 IFNL1Q8IU54 200 aa21.39■■□□□ 1.01
SMG6-212ENST00000573153 ZNF296Q8WUU4 475 aaPredicted RBP21.39■■□□□ 1.01
SMG6-212ENST00000573153 RHBDL3P58872 404 aa21.38■■□□□ 1.01
SMG6-212ENST00000573153 MAP3K9P80192 1104 aa21.38■■□□□ 1.01
SMG6-212ENST00000573153 DGKZQ13574 1117 aa21.38■■□□□ 1.01
SMG6-212ENST00000573153 SH3BP5LQ7L8J4 393 aa21.38■■□□□ 1.01
SMG6-212ENST00000573153 OPTNQ96CV9 577 aa21.38■■□□□ 1.01
SMG6-212ENST00000573153 NEUROD6Q96NK8 337 aa21.38■■□□□ 1.01
SMG6-212ENST00000573153 DBNDD2Q9BQY9 259 aa21.38■■□□□ 1.01
SMG6-212ENST00000573153 IDI2Q9BXS1 227 aa21.38■■□□□ 1.01
SMG6-212ENST00000573153 DDX4Q9NQI0 724 aaKnown RBP21.38■■□□□ 1.01
SMG6-212ENST00000573153 DOCK2Q92608 1830 aa21.37■■□□□ 1.01
SMG6-212ENST00000573153 SPDYE5A6NIY4 337 aa21.37■■□□□ 1.01
SMG6-212ENST00000573153 GPR25O00155 361 aa21.37■■□□□ 1.01
SMG6-212ENST00000573153 WDHD1O75717 1129 aaPredicted RBP21.37■■□□□ 1.01
SMG6-212ENST00000573153 MECOMQ03112 1051 aa21.37■■□□□ 1.01
SMG6-212ENST00000573153 TBC1D9Q6ZT07 1266 aa21.37■■□□□ 1.01
SMG6-212ENST00000573153 SPATA5Q8NB90 893 aa21.37■■□□□ 1.01
SMG6-212ENST00000573153 TLR7Q9NYK1 1049 aaKnown RBP21.37■■□□□ 1.01
SMG6-212ENST00000573153 TMOD2Q9NZR1 351 aa21.37■■□□□ 1.01
SMG6-212ENST00000573153 ZNF112Q9UJU3 913 aa21.37■■□□□ 1.01
SMG6-212ENST00000573153 MAST2Q6P0Q8 1798 aa21.37■■□□□ 1.01
SMG6-212ENST00000573153 MROH7-TTC4A0A0A0MT08 1334 aa21.36■■□□□ 1.01
SMG6-212ENST00000573153 MS4A1P11836 297 aa21.36■■□□□ 1.01
SMG6-212ENST00000573153 ZGPATQ8N5A5 531 aaKnown RBP21.36■■□□□ 1.01
SMG6-212ENST00000573153 NSUN4Q96CB9 384 aaKnown RBP21.36■■□□□ 1.01
SMG6-212ENST00000573153 USP40Q9NVE5 1235 aa21.36■■□□□ 1.01
SMG6-212ENST00000573153 ABCF2Q9UG63 623 aa21.36■■□□□ 1.01
SMG6-212ENST00000573153 DBNLQ9UJU6 430 aaKnown RBP21.36■■□□□ 1.01
SMG6-212ENST00000573153 HTTP42858 3142 aa21.36■■□□□ 1.01
SMG6-212ENST00000573153 MYO5AQ9Y4I1 1855 aaKnown RBP21.35■■□□□ 1.01
SMG6-212ENST00000573153 GPR75-ASB3A0A0A6YYF3 556 aa21.35■■□□□ 1.01
SMG6-212ENST00000573153 SURF6O75683 361 aaKnown RBP21.35■■□□□ 1.01
SMG6-212ENST00000573153 SLURP2P0DP57 97 aa21.35■■□□□ 1.01
SMG6-212ENST00000573153 INHBEP58166 350 aa21.35■■□□□ 1.01
SMG6-212ENST00000573153 CAP1Q01518 475 aa21.35■■□□□ 1.01
SMG6-212ENST00000573153 TCP10Q12799 353 aa21.35■■□□□ 1.01
SMG6-212ENST00000573153 SIRT2Q8IXJ6 389 aa21.35■■□□□ 1.01
SMG6-212ENST00000573153 BRI3BPQ8WY22 251 aa21.35■■□□□ 1.01
SMG6-212ENST00000573153 ZKSCAN4Q969J2 545 aaPredicted RBP21.35■■□□□ 1.01
SMG6-212ENST00000573153 EAF2Q96CJ1 260 aaPredicted RBP21.35■■□□□ 1.01
SMG6-212ENST00000573153 INPP5BP32019 993 aa21.34■■□□□ 1.01
SMG6-212ENST00000573153 ZNF512BQ96KM6 892 aaPredicted RBP21.34■■□□□ 1.01
SMG6-212ENST00000573153 WRNIP1Q96S55 665 aa21.34■■□□□ 1.01
SMG6-212ENST00000573153 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.34■■□□□ 1.01
SMG6-212ENST00000573153 BTDP43251 543 aa21.33■■□□□ 1.01
SMG6-212ENST00000573153 RGS3P49796 1198 aa21.33■■□□□ 1.01
SMG6-212ENST00000573153 MAP3K10Q02779 954 aa21.33■■□□□ 1.01
SMG6-212ENST00000573153 MIGA2Q7L4E1 593 aa21.33■■□□□ 1.01
SMG6-212ENST00000573153 CTU1Q7Z7A3 348 aaKnown RBP21.33■■□□□ 1.01
SMG6-212ENST00000573153 ZBTB40Q9NUA8 1239 aa21.33■■□□□ 1.01
SMG6-212ENST00000573153 SIPA1L1O43166 1804 aa21.32■■□□□ 1
SMG6-212ENST00000573153 ENTPD3O75355 529 aa21.32■■□□□ 1
SMG6-212ENST00000573153 C20orf194Q5TEA3 1177 aa21.32■■□□□ 1
SMG6-212ENST00000573153 DZIP1Q86YF9 867 aaKnown RBP21.32■■□□□ 1
SMG6-212ENST00000573153 RCAN3Q9UKA8 241 aa21.32■■□□□ 1
SMG6-212ENST00000573153 DDTLA6NHG4 134 aaPredicted RBP21.31■■□□□ 1
SMG6-212ENST00000573153 PHF20L1A8MW92 1017 aa21.31■■□□□ 1
SMG6-212ENST00000573153 ALDH1A1P00352 501 aa21.31■■□□□ 1
SMG6-212ENST00000573153 CYP2E1P05181 493 aaPredicted RBP21.31■■□□□ 1
SMG6-212ENST00000573153 UQCRFS1P1P0C7P4 283 aa21.31■■□□□ 1
SMG6-212ENST00000573153 NOL9Q5SY16 702 aaKnown RBP21.31■■□□□ 1
SMG6-212ENST00000573153 SPTY2D1Q68D10 685 aaPredicted RBP21.31■■□□□ 1
SMG6-212ENST00000573153 ERICH6Q7L0X2 663 aa21.31■■□□□ 1
SMG6-212ENST00000573153 OTUD5Q96G74 571 aa21.31■■□□□ 1
SMG6-212ENST00000573153 ZNF341Q9BYN7 854 aa21.31■■□□□ 1
SMG6-212ENST00000573153 COG6Q9Y2V7 657 aa21.31■■□□□ 1
SMG6-212ENST00000573153 IRF6O14896 467 aa21.3■■□□□ 1
SMG6-212ENST00000573153 CRHR2Q13324 411 aa21.3■■□□□ 1
SMG6-212ENST00000573153 MOGSQ13724 837 aa21.3■■□□□ 1
SMG6-212ENST00000573153 DCAF15Q66K64 600 aa21.3■■□□□ 1
SMG6-212ENST00000573153 ADGRA1Q86SQ6 560 aa21.3■■□□□ 1
SMG6-212ENST00000573153 FAM43AQ8N2R8 423 aa21.3■■□□□ 1
SMG6-212ENST00000573153 SNRKQ9NRH2 765 aa21.3■■□□□ 1
SMG6-212ENST00000573153 EXOC6BQ9Y2D4 811 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms