RNA–Protein interactions for RNA: ENST00000573018.1

ERCC4-204, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-204ENST00000573018 USP5P45974 858 aa6.77□□□□□ -1.33
ERCC4-204ENST00000573018 CYP27C1Q4G0S4 372 aa6.77□□□□□ -1.33
ERCC4-204ENST00000573018 ATG4DQ86TL0 474 aaPredicted RBP6.77□□□□□ -1.33
ERCC4-204ENST00000573018 KSR1Q8IVT5 923 aa6.77□□□□□ -1.33
ERCC4-204ENST00000573018 TCF12Q99081 682 aa6.77□□□□□ -1.33
ERCC4-204ENST00000573018 WDR18Q9BV38 432 aa6.77□□□□□ -1.33
ERCC4-204ENST00000573018 MBNL3Q9NUK0 354 aaKnown RBP6.77□□□□□ -1.33
ERCC4-204ENST00000573018 CCDC87Q9NVE4 849 aa6.77□□□□□ -1.33
ERCC4-204ENST00000573018 PPP1R9AQ9ULJ8 1098 aa6.77□□□□□ -1.33
ERCC4-204ENST00000573018 U3KQE9 123 aa6.77□□□□□ -1.33
ERCC4-204ENST00000573018 NETO1Q8TDF5 533 aa6.76□□□□□ -1.33
ERCC4-204ENST00000573018 MISP3Q96FF7 219 aa6.76□□□□□ -1.33
ERCC4-204ENST00000573018 ZFYVE1Q9HBF4 777 aa6.76□□□□□ -1.33
ERCC4-204ENST00000573018 LRRN4CLQ8ND94 238 aa6.75□□□□□ -1.33
ERCC4-204ENST00000573018 PI4K2BQ8TCG2 481 aa6.75□□□□□ -1.33
ERCC4-204ENST00000573018 FAM13AO94988 1023 aa6.74□□□□□ -1.33
ERCC4-204ENST00000573018 B3GALT4O96024 378 aa6.74□□□□□ -1.33
ERCC4-204ENST00000573018 NPR3P17342 541 aa6.74□□□□□ -1.33
ERCC4-204ENST00000573018 GALNT12Q8IXK2 581 aa6.74□□□□□ -1.33
ERCC4-204ENST00000573018 GJD3Q8N144 294 aa6.74□□□□□ -1.33
ERCC4-204ENST00000573018 DDX54Q8TDD1 881 aaKnown RBP6.74□□□□□ -1.33
ERCC4-204ENST00000573018 ZC3H12CQ9C0D7 883 aaKnown RBP6.74□□□□□ -1.33
ERCC4-204ENST00000573018 TMPRSS2O15393 492 aa6.73□□□□□ -1.33
ERCC4-204ENST00000573018 LIG1P18858 919 aa6.73□□□□□ -1.33
ERCC4-204ENST00000573018 USPL1Q5W0Q7 1092 aa6.73□□□□□ -1.33
ERCC4-204ENST00000573018 TMEM40Q8WWA1 233 aa6.73□□□□□ -1.33
ERCC4-204ENST00000573018 WDR89Q96FK6 387 aaPredicted RBP6.73□□□□□ -1.33
ERCC4-204ENST00000573018 SLC38A3Q99624 504 aa6.73□□□□□ -1.33
ERCC4-204ENST00000573018 ZNF576Q9H609 170 aa6.73□□□□□ -1.33
ERCC4-204ENST00000573018 PIDD1Q9HB75 910 aa6.73□□□□□ -1.33
ERCC4-204ENST00000573018 ANO2Q9NQ90 1003 aa6.73□□□□□ -1.33
ERCC4-204ENST00000573018 LEFTY1O75610 366 aa6.72□□□□□ -1.33
ERCC4-204ENST00000573018 SSFA2P28290 1259 aa6.72□□□□□ -1.33
ERCC4-204ENST00000573018 ARHGAP27Q6ZUM4 889 aa6.72□□□□□ -1.33
ERCC4-204ENST00000573018 VAV3Q9UKW4 847 aa6.72□□□□□ -1.33
ERCC4-204ENST00000573018 PRKCQQ04759 706 aa6.71□□□□□ -1.34
ERCC4-204ENST00000573018 AOC3Q16853 763 aa6.71□□□□□ -1.34
ERCC4-204ENST00000573018 CCDC97Q96F63 343 aaPredicted RBP6.71□□□□□ -1.34
ERCC4-204ENST00000573018 RNGTTO60942 597 aaKnown RBP6.7□□□□□ -1.34
ERCC4-204ENST00000573018 ABL1P00519 1130 aa6.7□□□□□ -1.34
ERCC4-204ENST00000573018 ZNF157P51786 506 aaPredicted RBP6.7□□□□□ -1.34
ERCC4-204ENST00000573018 ZNF211Q13398 564 aaPredicted RBP6.7□□□□□ -1.34
ERCC4-204ENST00000573018 IFI16Q16666 785 aaKnown RBP6.7□□□□□ -1.34
ERCC4-204ENST00000573018 SMYD4Q8IYR2 804 aaPredicted RBP6.7□□□□□ -1.34
ERCC4-204ENST00000573018 HRASLS5Q96KN8 279 aa6.7□□□□□ -1.34
ERCC4-204ENST00000573018 FANCD2OSQ96PS1 177 aa6.7□□□□□ -1.34
ERCC4-204ENST00000573018 EHD4Q9H223 541 aa6.7□□□□□ -1.34
ERCC4-204ENST00000573018 CCDC86Q9H6F5 360 aaKnown RBP6.7□□□□□ -1.34
ERCC4-204ENST00000573018 PRDM7Q9NQW5 492 aa6.7□□□□□ -1.34
ERCC4-204ENST00000573018 CRIM1Q9NZV1 1036 aa6.7□□□□□ -1.34
ERCC4-204ENST00000573018 LRRC10BA6NIK2 292 aa6.69□□□□□ -1.34
ERCC4-204ENST00000573018 KRTAP9-7A8MTY7 169 aa6.69□□□□□ -1.34
ERCC4-204ENST00000573018 ITIH2P19823 946 aa6.69□□□□□ -1.34
ERCC4-204ENST00000573018 ID3Q02535 119 aa6.69□□□□□ -1.34
ERCC4-204ENST00000573018 FKBP4Q02790 459 aaKnown RBP eCLIP6.69□□□□□ -1.34
ERCC4-204ENST00000573018 MESP2Q0VG99 397 aa6.69□□□□□ -1.34
ERCC4-204ENST00000573018 AP3B2Q13367 1082 aa6.69□□□□□ -1.34
ERCC4-204ENST00000573018 ATXN3LQ9H3M9 355 aa6.69□□□□□ -1.34
ERCC4-204ENST00000573018 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.69□□□□□ -1.34
ERCC4-204ENST00000573018 PLAGL2Q9UPG8 496 aa6.69□□□□□ -1.34
ERCC4-204ENST00000573018 CEACAM5P06731 702 aa6.68□□□□□ -1.34
ERCC4-204ENST00000573018 HCLS1P14317 486 aaPredicted RBP6.68□□□□□ -1.34
ERCC4-204ENST00000573018 ITPKAP23677 461 aa6.68□□□□□ -1.34
ERCC4-204ENST00000573018 OXCT1P55809 520 aa6.68□□□□□ -1.34
ERCC4-204ENST00000573018 SF3B2Q13435 895 aaKnown RBP6.68□□□□□ -1.34
ERCC4-204ENST00000573018 TTLL4Q14679 1199 aa6.68□□□□□ -1.34
ERCC4-204ENST00000573018 KIAA0319Q5VV43 1072 aa6.68□□□□□ -1.34
ERCC4-204ENST00000573018 KRTAP4-11Q9BYQ6 195 aa6.68□□□□□ -1.34
ERCC4-204ENST00000573018 NPHS2Q9NP85 383 aa6.68□□□□□ -1.34
ERCC4-204ENST00000573018 TMEM88BA6NKF7 163 aa6.67□□□□□ -1.34
ERCC4-204ENST00000573018 ZNF862O60290 1169 aa6.67□□□□□ -1.34
ERCC4-204ENST00000573018 ZNF865P0CJ78 1059 aaPredicted RBP6.67□□□□□ -1.34
ERCC4-204ENST00000573018 MLANAQ16655 118 aa6.67□□□□□ -1.34
ERCC4-204ENST00000573018 ANGEL2Q5VTE6 544 aaKnown RBP6.67□□□□□ -1.34
ERCC4-204ENST00000573018 FAM84AQ96KN4 292 aa6.67□□□□□ -1.34
ERCC4-204ENST00000573018 DUSP23Q9BVJ7 150 aa6.67□□□□□ -1.34
ERCC4-204ENST00000573018 DISC1Q9NRI5 854 aa6.67□□□□□ -1.34
ERCC4-204ENST00000573018 SYNGAP1Q96PV0 1343 aa6.67□□□□□ -1.34
ERCC4-204ENST00000573018 SLFN14P0C7P3 912 aa6.66□□□□□ -1.34
ERCC4-204ENST00000573018 ZSWIM9Q86XI8 627 aa6.66□□□□□ -1.34
ERCC4-204ENST00000573018 TMEM265A0A087WTH1 108 aa6.65□□□□□ -1.34
ERCC4-204ENST00000573018 FAAP100Q0VG06 881 aa6.65□□□□□ -1.34
ERCC4-204ENST00000573018 ORC1Q13415 861 aa6.65□□□□□ -1.34
ERCC4-204ENST00000573018 KCNMB1Q16558 191 aa6.65□□□□□ -1.34
ERCC4-204ENST00000573018 SLC23A3Q6PIS1 610 aa6.65□□□□□ -1.34
ERCC4-204ENST00000573018 TOP6BLQ8N6T0 577 aa6.65□□□□□ -1.34
ERCC4-204ENST00000573018 MKNK2Q9HBH9 465 aa6.65□□□□□ -1.34
ERCC4-204ENST00000573018 ABCB6Q9NP58 842 aa6.65□□□□□ -1.34
ERCC4-204ENST00000573018 SERPINA10Q9UK55 444 aa6.65□□□□□ -1.34
ERCC4-204ENST00000573018 MTMR7Q9Y216 660 aa6.65□□□□□ -1.34
ERCC4-204ENST00000573018 CARNS1A5YM72 827 aa6.64□□□□□ -1.35
ERCC4-204ENST00000573018 ZNF503-AS2A6NEH8 195 aa6.64□□□□□ -1.35
ERCC4-204ENST00000573018 NEFMP07197 916 aa6.64□□□□□ -1.35
ERCC4-204ENST00000573018 CILP2Q8IUL8 1156 aa6.64□□□□□ -1.35
ERCC4-204ENST00000573018 FLAD1Q8NFF5 587 aa6.64□□□□□ -1.35
ERCC4-204ENST00000573018 SSU72Q9NP77 194 aaKnown RBP6.64□□□□□ -1.35
ERCC4-204ENST00000573018 PCOLCE2Q9UKZ9 415 aa6.64□□□□□ -1.35
ERCC4-204ENST00000573018 PCDHGC5Q9Y5F6 944 aa6.64□□□□□ -1.35
ERCC4-204ENST00000573018 GSTP1P09211 210 aaKnown RBP6.63□□□□□ -1.35
ERCC4-204ENST00000573018 CFPP27918 469 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms