RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 CETPP11597 493 aa10.73□□□□□ -0.69
CTDNEP1-203ENST00000570385 EN2P19622 333 aaPredicted RBP10.73□□□□□ -0.69
CTDNEP1-203ENST00000570385 FKBP1CQ5VVH2 108 aa10.73□□□□□ -0.69
CTDNEP1-203ENST00000570385 ZFPM1Q8IX07 1006 aa10.73□□□□□ -0.69
CTDNEP1-203ENST00000570385 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.73□□□□□ -0.69
CTDNEP1-203ENST00000570385 MEIS3Q99687 375 aa10.73□□□□□ -0.69
CTDNEP1-203ENST00000570385 MRIQ9BWK5 157 aa10.73□□□□□ -0.69
CTDNEP1-203ENST00000570385 ZNF341Q9BYN7 854 aa10.73□□□□□ -0.69
CTDNEP1-203ENST00000570385 ARHGAP39Q9C0H5 1083 aa10.73□□□□□ -0.69
CTDNEP1-203ENST00000570385 PTCH2Q9Y6C5 1203 aa10.73□□□□□ -0.69
CTDNEP1-203ENST00000570385 KIF16BQ96L93 1317 aa10.73□□□□□ -0.69
CTDNEP1-203ENST00000570385 LDHBP07195 334 aaKnown RBP10.72□□□□□ -0.69
CTDNEP1-203ENST00000570385 SNAPC2Q13487 334 aa10.72□□□□□ -0.69
CTDNEP1-203ENST00000570385 DCAF15Q66K64 600 aa10.72□□□□□ -0.69
CTDNEP1-203ENST00000570385 INTS3Q68E01 1043 aaKnown RBP10.72□□□□□ -0.69
CTDNEP1-203ENST00000570385 TRMT2AQ8IZ69 625 aaKnown RBP10.72□□□□□ -0.69
CTDNEP1-203ENST00000570385 USP40Q9NVE5 1235 aa10.72□□□□□ -0.69
CTDNEP1-203ENST00000570385 GNL3LQ9NVN8 582 aaKnown RBP10.72□□□□□ -0.69
CTDNEP1-203ENST00000570385 LAMB1P07942 1786 aa10.72□□□□□ -0.69
CTDNEP1-203ENST00000570385 MYH13Q9UKX3 1938 aa10.72□□□□□ -0.69
CTDNEP1-203ENST00000570385 TLR2O60603 784 aa10.71□□□□□ -0.69
CTDNEP1-203ENST00000570385 CIAO1O76071 339 aa10.71□□□□□ -0.69
CTDNEP1-203ENST00000570385 SLURP2P0DP57 97 aa10.71□□□□□ -0.69
CTDNEP1-203ENST00000570385 TIMM10P62072 90 aa10.71□□□□□ -0.69
CTDNEP1-203ENST00000570385 PPIL2Q13356 520 aa10.71□□□□□ -0.69
CTDNEP1-203ENST00000570385 FAM151AQ8WW52 585 aa10.71□□□□□ -0.69
CTDNEP1-203ENST00000570385 ARMC5Q96C12 935 aa10.71□□□□□ -0.69
CTDNEP1-203ENST00000570385 HOOK2Q96ED9 719 aa10.71□□□□□ -0.69
CTDNEP1-203ENST00000570385 API5Q9BZZ5 524 aaKnown RBP10.71□□□□□ -0.69
CTDNEP1-203ENST00000570385 FAM198AQ9UFP1 575 aa10.71□□□□□ -0.69
CTDNEP1-203ENST00000570385 CPA4Q9UI42 421 aa10.71□□□□□ -0.69
CTDNEP1-203ENST00000570385 ZSWIM8A7E2V4 1837 aa10.7□□□□□ -0.7
CTDNEP1-203ENST00000570385 HTTP42858 3142 aa10.7□□□□□ -0.7
CTDNEP1-203ENST00000570385 WDHD1O75717 1129 aaPredicted RBP10.7□□□□□ -0.7
CTDNEP1-203ENST00000570385 IL15P40933 162 aaPredicted RBP10.7□□□□□ -0.7
CTDNEP1-203ENST00000570385 RARSP54136 660 aaKnown RBP10.7□□□□□ -0.7
CTDNEP1-203ENST00000570385 SLC9C1Q4G0N8 1177 aa10.7□□□□□ -0.7
CTDNEP1-203ENST00000570385 CCDC102BQ68D86 513 aa10.7□□□□□ -0.7
CTDNEP1-203ENST00000570385 SH3TC2Q8TF17 1288 aa10.7□□□□□ -0.7
CTDNEP1-203ENST00000570385 TMEM106CQ9BVX2 250 aa10.7□□□□□ -0.7
CTDNEP1-203ENST00000570385 ABCF2Q9UG63 623 aa10.7□□□□□ -0.7
CTDNEP1-203ENST00000570385 DENND2AQ9ULE3 1009 aa10.7□□□□□ -0.7
CTDNEP1-203ENST00000570385 TNNQ9UQP3 1299 aa10.7□□□□□ -0.7
CTDNEP1-203ENST00000570385 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.7□□□□□ -0.7
CTDNEP1-203ENST00000570385 CEP290O15078 2479 aa10.7□□□□□ -0.7
CTDNEP1-203ENST00000570385 RPAP1Q9BWH6 1393 aaPredicted RBP10.69□□□□□ -0.7
CTDNEP1-203ENST00000570385 CENPFP49454 3210 aa10.69□□□□□ -0.7
CTDNEP1-203ENST00000570385 PDHXO00330 501 aa10.69□□□□□ -0.7
CTDNEP1-203ENST00000570385 RGS3P49796 1198 aa10.69□□□□□ -0.7
CTDNEP1-203ENST00000570385 LACTBP83111 547 aaPredicted RBP10.69□□□□□ -0.7
CTDNEP1-203ENST00000570385 PPATQ06203 517 aa10.69□□□□□ -0.7
CTDNEP1-203ENST00000570385 TFCP2Q12800 502 aa10.69□□□□□ -0.7
CTDNEP1-203ENST00000570385 RASGRF1Q13972 1273 aa10.69□□□□□ -0.7
CTDNEP1-203ENST00000570385 KIF22Q14807 665 aa10.69□□□□□ -0.7
CTDNEP1-203ENST00000570385 ARHGEF6Q15052 776 aa10.69□□□□□ -0.7
CTDNEP1-203ENST00000570385 SLC4A8Q2Y0W8 1093 aa10.69□□□□□ -0.7
CTDNEP1-203ENST00000570385 ZSCAN29Q8IWY8 852 aaPredicted RBP10.69□□□□□ -0.7
CTDNEP1-203ENST00000570385 ZNF333Q96JL9 665 aa10.69□□□□□ -0.7
CTDNEP1-203ENST00000570385 COPRSQ9NQ92 184 aa10.69□□□□□ -0.7
CTDNEP1-203ENST00000570385 FBXO3Q9UK99 471 aa10.69□□□□□ -0.7
CTDNEP1-203ENST00000570385 A0A1B0GUL7 405 aa10.68□□□□□ -0.7
CTDNEP1-203ENST00000570385 SRGAP3O43295 1099 aa10.68□□□□□ -0.7
CTDNEP1-203ENST00000570385 CTGFP29279 349 aa10.68□□□□□ -0.7
CTDNEP1-203ENST00000570385 PICALMQ13492 652 aa10.68□□□□□ -0.7
CTDNEP1-203ENST00000570385 SH3BP5LQ7L8J4 393 aa10.68□□□□□ -0.7
CTDNEP1-203ENST00000570385 NBPF11Q86T75 865 aa10.68□□□□□ -0.7
CTDNEP1-203ENST00000570385 DZIP1Q86YF9 867 aaKnown RBP10.68□□□□□ -0.7
CTDNEP1-203ENST00000570385 FRAT1Q92837 279 aaPredicted RBP10.68□□□□□ -0.7
CTDNEP1-203ENST00000570385 XAGE2Q96GT9 111 aa10.68□□□□□ -0.7
CTDNEP1-203ENST00000570385 NEUROD6Q96NK8 337 aa10.68□□□□□ -0.7
CTDNEP1-203ENST00000570385 ZNF112Q9UJU3 913 aa10.68□□□□□ -0.7
CTDNEP1-203ENST00000570385 SALL1Q9NSC2 1324 aa10.67□□□□□ -0.7
CTDNEP1-203ENST00000570385 MKI67P46013 3256 aaKnown RBP10.67□□□□□ -0.7
CTDNEP1-203ENST00000570385 MYH2Q9UKX2 1941 aa10.67□□□□□ -0.7
CTDNEP1-203ENST00000570385 SEMA3EO15041 775 aa10.67□□□□□ -0.7
CTDNEP1-203ENST00000570385 CT47B1P0C2W7 299 aaPredicted RBP10.67□□□□□ -0.7
CTDNEP1-203ENST00000570385 CYP2C8P10632 490 aa10.67□□□□□ -0.7
CTDNEP1-203ENST00000570385 BTDP43251 543 aa10.67□□□□□ -0.7
CTDNEP1-203ENST00000570385 PSMC4P43686 418 aa10.67□□□□□ -0.7
CTDNEP1-203ENST00000570385 MOGSQ13724 837 aa10.67□□□□□ -0.7
CTDNEP1-203ENST00000570385 C17orf99Q6UX52 265 aa10.67□□□□□ -0.7
CTDNEP1-203ENST00000570385 PI16Q6UXB8 463 aa10.67□□□□□ -0.7
CTDNEP1-203ENST00000570385 TBC1D9Q6ZT07 1266 aa10.67□□□□□ -0.7
CTDNEP1-203ENST00000570385 ANKRD23Q86SG2 305 aa10.67□□□□□ -0.7
CTDNEP1-203ENST00000570385 CCDC84Q86UT8 332 aaPredicted RBP10.67□□□□□ -0.7
CTDNEP1-203ENST00000570385 CLUAP1Q96AJ1 413 aa10.67□□□□□ -0.7
CTDNEP1-203ENST00000570385 DDX4Q9NQI0 724 aaKnown RBP10.67□□□□□ -0.7
CTDNEP1-203ENST00000570385 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.67□□□□□ -0.7
CTDNEP1-203ENST00000570385 KCNH4Q9UQ05 1017 aa10.67□□□□□ -0.7
CTDNEP1-203ENST00000570385 HDAC5Q9UQL6 1122 aa10.67□□□□□ -0.7
CTDNEP1-203ENST00000570385 ZHX2Q9Y6X8 837 aa10.67□□□□□ -0.7
CTDNEP1-203ENST00000570385 DDTLA6NHG4 134 aaPredicted RBP10.66□□□□□ -0.7
CTDNEP1-203ENST00000570385 FAM196BA6NMK8 535 aa10.66□□□□□ -0.7
CTDNEP1-203ENST00000570385 PHF20L1A8MW92 1017 aa10.66□□□□□ -0.7
CTDNEP1-203ENST00000570385 BCAR3O75815 825 aa10.66□□□□□ -0.7
CTDNEP1-203ENST00000570385 FMNL1O95466 1100 aaPredicted RBP10.66□□□□□ -0.7
CTDNEP1-203ENST00000570385 MTFR1Q15390 333 aa10.66□□□□□ -0.7
CTDNEP1-203ENST00000570385 GPAT2Q6NUI2 795 aa10.66□□□□□ -0.7
CTDNEP1-203ENST00000570385 GADL1Q6ZQY3 521 aa10.66□□□□□ -0.7
CTDNEP1-203ENST00000570385 ZGPATQ8N5A5 531 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms