RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 GCC1Q96CN9 775 aa15.15■□□□□ 0.02
CAPN3-220ENST00000569827 USP44Q9H0E7 712 aa15.15■□□□□ 0.02
CAPN3-220ENST00000569827 SIL1Q9H173 461 aa15.15■□□□□ 0.02
CAPN3-220ENST00000569827 ALPK3Q96L96 1907 aa15.14■□□□□ 0.01
CAPN3-220ENST00000569827 TLR2O60603 784 aa15.14■□□□□ 0.01
CAPN3-220ENST00000569827 CETPP11597 493 aa15.14■□□□□ 0.01
CAPN3-220ENST00000569827 RFX5P48382 616 aaPredicted RBP15.14■□□□□ 0.01
CAPN3-220ENST00000569827 NFIAQ12857 509 aa15.14■□□□□ 0.01
CAPN3-220ENST00000569827 PPIL2Q13356 520 aa15.14■□□□□ 0.01
CAPN3-220ENST00000569827 SNAPC2Q13487 334 aa15.14■□□□□ 0.01
CAPN3-220ENST00000569827 MTFR1Q15390 333 aa15.14■□□□□ 0.01
CAPN3-220ENST00000569827 PUM3Q15397 648 aaKnown RBP15.14■□□□□ 0.01
CAPN3-220ENST00000569827 SSH1Q8WYL5 1049 aa15.14■□□□□ 0.01
CAPN3-220ENST00000569827 DAGLAQ9Y4D2 1042 aa15.14■□□□□ 0.01
CAPN3-220ENST00000569827 ZNF521Q96K83 1311 aa15.14■□□□□ 0.01
CAPN3-220ENST00000569827 IFIT1P09914 478 aaKnown RBP15.13■□□□□ 0.01
CAPN3-220ENST00000569827 SLURP2P0DP57 97 aa15.13■□□□□ 0.01
CAPN3-220ENST00000569827 PRDX5P30044 214 aa15.13■□□□□ 0.01
CAPN3-220ENST00000569827 CDC42EP5Q6NZY7 148 aa15.13■□□□□ 0.01
CAPN3-220ENST00000569827 FAM83AQ86UY5 434 aa15.13■□□□□ 0.01
CAPN3-220ENST00000569827 ZNF341Q9BYN7 854 aa15.13■□□□□ 0.01
CAPN3-220ENST00000569827 RPAP1Q9BWH6 1393 aaPredicted RBP15.12■□□□□ 0.01
CAPN3-220ENST00000569827 MYO5AQ9Y4I1 1855 aaKnown RBP15.12■□□□□ 0.01
CAPN3-220ENST00000569827 EYA2O00167 538 aa15.12■□□□□ 0.01
CAPN3-220ENST00000569827 SLC5A1P13866 664 aa15.12■□□□□ 0.01
CAPN3-220ENST00000569827 NBPF11Q86T75 865 aa15.12■□□□□ 0.01
CAPN3-220ENST00000569827 ZFPM1Q8IX07 1006 aa15.12■□□□□ 0.01
CAPN3-220ENST00000569827 COLQQ9Y215 455 aaPredicted RBP15.12■□□□□ 0.01
CAPN3-220ENST00000569827 MAST3O60307 1309 aa15.12■□□□□ 0.01
CAPN3-220ENST00000569827 PDHXO00330 501 aa15.11■□□□□ 0.01
CAPN3-220ENST00000569827 ZEB1P37275 1124 aaPredicted RBP15.11■□□□□ 0.01
CAPN3-220ENST00000569827 FXR1P51114 621 aaKnown RBP eCLIP15.11■□□□□ 0.01
CAPN3-220ENST00000569827 KIF22Q14807 665 aa15.11■□□□□ 0.01
CAPN3-220ENST00000569827 DCAF15Q66K64 600 aa15.11■□□□□ 0.01
CAPN3-220ENST00000569827 HHIPL2Q6UWX4 724 aa15.11■□□□□ 0.01
CAPN3-220ENST00000569827 ATG9AQ7Z3C6 839 aa15.11■□□□□ 0.01
CAPN3-220ENST00000569827 SHISA4Q96DD7 197 aa15.11■□□□□ 0.01
CAPN3-220ENST00000569827 TRIM47Q96LD4 638 aa15.11■□□□□ 0.01
CAPN3-220ENST00000569827 PTPRCP08575 1304 aa15.11■□□□□ 0.01
CAPN3-220ENST00000569827 CDK5RAP2Q96SN8 1893 aa15.1■□□□□ 0.01
CAPN3-220ENST00000569827 H0YGN5 161 aa15.1■□□□□ 0.01
CAPN3-220ENST00000569827 PSMC4P43686 418 aa15.1■□□□□ 0.01
CAPN3-220ENST00000569827 MOGSQ13724 837 aa15.1■□□□□ 0.01
CAPN3-220ENST00000569827 ARHGEF6Q15052 776 aa15.1■□□□□ 0.01
CAPN3-220ENST00000569827 FKBP1CQ5VVH2 108 aa15.1■□□□□ 0.01
CAPN3-220ENST00000569827 C17orf99Q6UX52 265 aa15.1■□□□□ 0.01
CAPN3-220ENST00000569827 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.1■□□□□ 0.01
CAPN3-220ENST00000569827 FAM198AQ9UFP1 575 aa15.1■□□□□ 0.01
CAPN3-220ENST00000569827 PA2G4Q9UQ80 394 aaKnown RBP15.1■□□□□ 0.01
CAPN3-220ENST00000569827 ADGRA2Q96PE1 1338 aa15.1■□□□□ 0.01
CAPN3-220ENST00000569827 ZNF316A6NFI3 1004 aaPredicted RBP15.09■□□□□ 0.01
CAPN3-220ENST00000569827 WDHD1O75717 1129 aaPredicted RBP15.09■□□□□ 0.01
CAPN3-220ENST00000569827 CYP2C8P10632 490 aa15.09■□□□□ 0.01
CAPN3-220ENST00000569827 OSBPP22059 807 aa15.09■□□□□ 0.01
CAPN3-220ENST00000569827 ADORA1P30542 326 aa15.09■□□□□ 0.01
CAPN3-220ENST00000569827 PHKA1P46020 1223 aa15.09■□□□□ 0.01
CAPN3-220ENST00000569827 PPATQ06203 517 aa15.09■□□□□ 0.01
CAPN3-220ENST00000569827 WDR66Q8TBY9 1149 aa15.09■□□□□ 0.01
CAPN3-220ENST00000569827 FAM151AQ8WW52 585 aa15.09■□□□□ 0.01
CAPN3-220ENST00000569827 LPIN2Q92539 896 aa15.09■□□□□ 0.01
CAPN3-220ENST00000569827 CDCA7LQ96GN5 454 aa15.09■□□□□ 0.01
CAPN3-220ENST00000569827 SUGT1Q9Y2Z0 365 aa15.09■□□□□ 0.01
CAPN3-220ENST00000569827 FMNL1O95466 1100 aaPredicted RBP15.08■□□□□ 0
CAPN3-220ENST00000569827 ATP2B3Q16720 1220 aa15.08■□□□□ 0
CAPN3-220ENST00000569827 CCDC84Q86UT8 332 aaPredicted RBP15.08■□□□□ 0
CAPN3-220ENST00000569827 HOOK2Q96ED9 719 aa15.08■□□□□ 0
CAPN3-220ENST00000569827 USP40Q9NVE5 1235 aa15.08■□□□□ 0
CAPN3-220ENST00000569827 SRRDQ9UH36 339 aa15.08■□□□□ 0
CAPN3-220ENST00000569827 MYPNQ86TC9 1320 aa15.08■□□□□ 0
CAPN3-220ENST00000569827 KIF16BQ96L93 1317 aa15.08■□□□□ 0
CAPN3-220ENST00000569827 LDHBP07195 334 aaKnown RBP15.07■□□□□ 0
CAPN3-220ENST00000569827 ANKRD23Q86SG2 305 aa15.07■□□□□ 0
CAPN3-220ENST00000569827 MRIQ9BWK5 157 aa15.07■□□□□ 0
CAPN3-220ENST00000569827 ZCCHC17Q9NP64 241 aaKnown RBP15.07■□□□□ 0
CAPN3-220ENST00000569827 SMC4Q9NTJ3 1288 aa15.07■□□□□ 0
CAPN3-220ENST00000569827 ZNF112Q9UJU3 913 aa15.07■□□□□ 0
CAPN3-220ENST00000569827 KCNH4Q9UQ05 1017 aa15.07■□□□□ 0
CAPN3-220ENST00000569827 SIPA1L1O43166 1804 aa15.06■□□□□ 0
CAPN3-220ENST00000569827 RGS3P49796 1198 aa15.06■□□□□ 0
CAPN3-220ENST00000569827 PRKCZQ05513 592 aa15.06■□□□□ 0
CAPN3-220ENST00000569827 GPAT2Q6NUI2 795 aa15.06■□□□□ 0
CAPN3-220ENST00000569827 CHRDL2Q6WN34 429 aa15.06■□□□□ 0
CAPN3-220ENST00000569827 RAET1EQ8TD07 263 aa15.06■□□□□ 0
CAPN3-220ENST00000569827 GABRQQ9UN88 632 aa15.06■□□□□ 0
CAPN3-220ENST00000569827 LRRFIP2Q9Y608 721 aaKnown RBP15.06■□□□□ 0
CAPN3-220ENST00000569827 ATRNL1Q5VV63 1379 aa15.06■□□□□ 0
CAPN3-220ENST00000569827 LOC285556D6RIA3 1793 aa15.06■□□□□ 0
CAPN3-220ENST00000569827 LAMA3Q16787 3333 aa15.05■□□□□ 0
CAPN3-220ENST00000569827 UBTFL1P0CB47 393 aaPredicted RBP15.05■□□□□ -0
CAPN3-220ENST00000569827 CCL5P13501 91 aa15.05■□□□□ -0
CAPN3-220ENST00000569827 GRK4P32298 578 aa15.05■□□□□ -0
CAPN3-220ENST00000569827 GADL1Q6ZQY3 521 aa15.05■□□□□ -0
CAPN3-220ENST00000569827 SH3BP5LQ7L8J4 393 aa15.05■□□□□ -0
CAPN3-220ENST00000569827 BIN2Q9UBW5 565 aaPredicted RBP15.05■□□□□ -0
CAPN3-220ENST00000569827 RFX7Q2KHR2 1363 aa15.04■□□□□ -0
CAPN3-220ENST00000569827 FAM196BA6NMK8 535 aa15.04■□□□□ -0
CAPN3-220ENST00000569827 E9PSI1 815 aa15.04■□□□□ -0
CAPN3-220ENST00000569827 SLFN5Q08AF3 891 aa15.04■□□□□ -0
CAPN3-220ENST00000569827 PICALMQ13492 652 aa15.04■□□□□ -0
CAPN3-220ENST00000569827 NOL9Q5SY16 702 aaKnown RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms