RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 TBC1D9Q6ZT07 1266 aa16.92■□□□□ 0.3
HERPUD1-218ENST00000569569 FAM83AQ86UY5 434 aa16.92■□□□□ 0.3
HERPUD1-218ENST00000569569 TLR7Q9NYK1 1049 aaKnown RBP16.92■□□□□ 0.3
HERPUD1-218ENST00000569569 AOC2O75106 756 aa16.91■□□□□ 0.3
HERPUD1-218ENST00000569569 CACNB3P54284 484 aa16.91■□□□□ 0.3
HERPUD1-218ENST00000569569 NOGQ13253 232 aa16.91■□□□□ 0.3
HERPUD1-218ENST00000569569 PRKG1Q13976 671 aa16.91■□□□□ 0.3
HERPUD1-218ENST00000569569 SNRKQ9NRH2 765 aa16.91■□□□□ 0.3
HERPUD1-218ENST00000569569 RNF216Q9NWF9 866 aaPredicted RBP16.91■□□□□ 0.3
HERPUD1-218ENST00000569569 LRP2BPQ9P2M1 347 aa16.91■□□□□ 0.3
HERPUD1-218ENST00000569569 ANGEL1Q9UNK9 670 aaKnown RBP16.91■□□□□ 0.3
HERPUD1-218ENST00000569569 GAKO14976 1311 aa16.91■□□□□ 0.3
HERPUD1-218ENST00000569569 IGSF3O75054 1194 aa16.9■□□□□ 0.3
HERPUD1-218ENST00000569569 LDHCP07864 332 aa16.9■□□□□ 0.3
HERPUD1-218ENST00000569569 IFIT2P09913 472 aaKnown RBP16.9■□□□□ 0.3
HERPUD1-218ENST00000569569 GSTO1P78417 241 aa16.9■□□□□ 0.3
HERPUD1-218ENST00000569569 MECOMQ03112 1051 aa16.9■□□□□ 0.3
HERPUD1-218ENST00000569569 MAP3K11Q16584 847 aa16.9■□□□□ 0.3
HERPUD1-218ENST00000569569 CDC42EP5Q6NZY7 148 aa16.9■□□□□ 0.3
HERPUD1-218ENST00000569569 NSUN4Q96CB9 384 aaKnown RBP16.9■□□□□ 0.3
HERPUD1-218ENST00000569569 TEPSINQ96N21 525 aa16.9■□□□□ 0.3
HERPUD1-218ENST00000569569 CRBNQ96SW2 442 aa16.9■□□□□ 0.3
HERPUD1-218ENST00000569569 TMEM39BQ9GZU3 492 aa16.9■□□□□ 0.3
HERPUD1-218ENST00000569569 USP40Q9NVE5 1235 aa16.9■□□□□ 0.3
HERPUD1-218ENST00000569569 WBP1LQ9NX94 342 aa16.9■□□□□ 0.3
HERPUD1-218ENST00000569569 RAI14Q9P0K7 980 aa16.9■□□□□ 0.3
HERPUD1-218ENST00000569569 FAM155AB1AL88 458 aaPredicted RBP16.89■□□□□ 0.29
HERPUD1-218ENST00000569569 CYP2E1P05181 493 aaPredicted RBP16.89■□□□□ 0.29
HERPUD1-218ENST00000569569 SLC10A3P09131 477 aa16.89■□□□□ 0.29
HERPUD1-218ENST00000569569 ZAP70P43403 619 aa16.89■□□□□ 0.29
HERPUD1-218ENST00000569569 LRRCC1Q9C099 1032 aa16.89■□□□□ 0.29
HERPUD1-218ENST00000569569 DCTPP1Q9H773 170 aa16.89■□□□□ 0.29
HERPUD1-218ENST00000569569 PCDHB15Q9Y5E8 787 aa16.89■□□□□ 0.29
HERPUD1-218ENST00000569569 MROH7-TTC4A0A0A0MT08 1334 aa16.89■□□□□ 0.29
HERPUD1-218ENST00000569569 SSC5DA1L4H1 1573 aa16.89■□□□□ 0.29
HERPUD1-218ENST00000569569 GPR75-ASB3A0A0A6YYF3 556 aa16.88■□□□□ 0.29
HERPUD1-218ENST00000569569 UNCXA6NJT0 531 aa16.88■□□□□ 0.29
HERPUD1-218ENST00000569569 LDLRAD1Q5T700 205 aa16.88■□□□□ 0.29
HERPUD1-218ENST00000569569 ZNF384Q8TF68 577 aa16.88■□□□□ 0.29
HERPUD1-218ENST00000569569 FAM151AQ8WW52 585 aa16.88■□□□□ 0.29
HERPUD1-218ENST00000569569 AIDAQ96BJ3 306 aa16.88■□□□□ 0.29
HERPUD1-218ENST00000569569 FZD1Q9UP38 647 aa16.88■□□□□ 0.29
HERPUD1-218ENST00000569569 MAST2Q6P0Q8 1798 aa16.87■□□□□ 0.29
HERPUD1-218ENST00000569569 DOCK2Q92608 1830 aa16.87■□□□□ 0.29
HERPUD1-218ENST00000569569 USP2O75604 605 aaPredicted RBP16.87■□□□□ 0.29
HERPUD1-218ENST00000569569 BTDP43251 543 aa16.87■□□□□ 0.29
HERPUD1-218ENST00000569569 IREB2P48200 963 aaKnown RBP16.87■□□□□ 0.29
HERPUD1-218ENST00000569569 RASAL3Q86YV0 1011 aa16.87■□□□□ 0.29
HERPUD1-218ENST00000569569 HOOK2Q96ED9 719 aa16.87■□□□□ 0.29
HERPUD1-218ENST00000569569 BEGAINQ9BUH8 593 aa16.87■□□□□ 0.29
HERPUD1-218ENST00000569569 BCL11AQ9H165 835 aa16.87■□□□□ 0.29
HERPUD1-218ENST00000569569 OTOFQ9HC10 1997 aa16.86■□□□□ 0.29
HERPUD1-218ENST00000569569 NFIAQ12857 509 aa16.86■□□□□ 0.29
HERPUD1-218ENST00000569569 AAMPQ13685 434 aa16.86■□□□□ 0.29
HERPUD1-218ENST00000569569 NAA16Q6N069 864 aaPredicted RBP16.86■□□□□ 0.29
HERPUD1-218ENST00000569569 CDAN1Q8IWY9 1227 aa16.86■□□□□ 0.29
HERPUD1-218ENST00000569569 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.86■□□□□ 0.29
HERPUD1-218ENST00000569569 ZIC5Q96T25 663 aa16.86■□□□□ 0.29
HERPUD1-218ENST00000569569 IDI2Q9BXS1 227 aa16.86■□□□□ 0.29
HERPUD1-218ENST00000569569 RPAP1Q9BWH6 1393 aaPredicted RBP16.86■□□□□ 0.29
HERPUD1-218ENST00000569569 CDK5RAP2Q96SN8 1893 aa16.85■□□□□ 0.29
HERPUD1-218ENST00000569569 MAP4K4O95819 1239 aaPredicted RBP16.85■□□□□ 0.29
HERPUD1-218ENST00000569569 KIF23Q02241 960 aaPredicted RBP16.85■□□□□ 0.29
HERPUD1-218ENST00000569569 TCP10Q12799 353 aa16.85■□□□□ 0.29
HERPUD1-218ENST00000569569 REM2Q8IYK8 340 aaPredicted RBP16.85■□□□□ 0.29
HERPUD1-218ENST00000569569 ANKRD13AQ8IZ07 590 aa16.85■□□□□ 0.29
HERPUD1-218ENST00000569569 SLC10A4Q96EP9 437 aa16.85■□□□□ 0.29
HERPUD1-218ENST00000569569 PIH1D3Q9NQM4 214 aaKnown RBP16.85■□□□□ 0.29
HERPUD1-218ENST00000569569 FAM198AQ9UFP1 575 aa16.85■□□□□ 0.29
HERPUD1-218ENST00000569569 FOXN1O15353 648 aa16.84■□□□□ 0.29
HERPUD1-218ENST00000569569 SMARCA5O60264 1052 aaPredicted RBP16.84■□□□□ 0.29
HERPUD1-218ENST00000569569 ENTPD3O75355 529 aa16.84■□□□□ 0.29
HERPUD1-218ENST00000569569 NOL10Q9BSC4 688 aaKnown RBP16.84■□□□□ 0.29
HERPUD1-218ENST00000569569 SUPT16HQ9Y5B9 1047 aaKnown RBP16.84■□□□□ 0.29
HERPUD1-218ENST00000569569 NDUFB9Q9Y6M9 179 aa16.84■□□□□ 0.29
HERPUD1-218ENST00000569569 WDHD1O75717 1129 aaPredicted RBP16.83■□□□□ 0.28
HERPUD1-218ENST00000569569 BAG3O95817 575 aa16.83■□□□□ 0.28
HERPUD1-218ENST00000569569 MYH7P12883 1935 aa16.83■□□□□ 0.28
HERPUD1-218ENST00000569569 CTCFP49711 727 aaPredicted RBP16.83■□□□□ 0.28
HERPUD1-218ENST00000569569 RGS3P49796 1198 aa16.83■□□□□ 0.28
HERPUD1-218ENST00000569569 RHBDL3P58872 404 aa16.83■□□□□ 0.28
HERPUD1-218ENST00000569569 TTF1Q15361 905 aaPredicted RBP16.83■□□□□ 0.28
HERPUD1-218ENST00000569569 DCAF15Q66K64 600 aa16.83■□□□□ 0.28
HERPUD1-218ENST00000569569 ANTXR1Q9H6X2 564 aa16.83■□□□□ 0.28
HERPUD1-218ENST00000569569 FOCADQ5VW36 1801 aa16.82■□□□□ 0.28
HERPUD1-218ENST00000569569 CA12O43570 354 aa16.82■□□□□ 0.28
HERPUD1-218ENST00000569569 NPM3O75607 178 aaKnown RBP16.82■□□□□ 0.28
HERPUD1-218ENST00000569569 IDH1O75874 414 aaKnown RBP16.82■□□□□ 0.28
HERPUD1-218ENST00000569569 MAP3K9P80192 1104 aa16.82■□□□□ 0.28
HERPUD1-218ENST00000569569 MAP3K12Q12852 859 aa16.82■□□□□ 0.28
HERPUD1-218ENST00000569569 TMED8Q6PL24 325 aaPredicted RBP16.82■□□□□ 0.28
HERPUD1-218ENST00000569569 CLMNQ96JQ2 1002 aa16.82■□□□□ 0.28
HERPUD1-218ENST00000569569 CSRNP1Q96S65 589 aa16.82■□□□□ 0.28
HERPUD1-218ENST00000569569 LAMB1P07942 1786 aa16.82■□□□□ 0.28
HERPUD1-218ENST00000569569 RFX7Q2KHR2 1363 aa16.81■□□□□ 0.28
HERPUD1-218ENST00000569569 PLCG2P16885 1265 aa16.81■□□□□ 0.28
HERPUD1-218ENST00000569569 ATP5JP18859 108 aa16.81■□□□□ 0.28
HERPUD1-218ENST00000569569 PPP4CP60510 307 aa16.81■□□□□ 0.28
HERPUD1-218ENST00000569569 PICALMQ13492 652 aa16.81■□□□□ 0.28
HERPUD1-218ENST00000569569 SPRYD7Q5W111 196 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms