RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 MCAMP43121 646 aa12.01□□□□□ -0.49
CLN6-209ENST00000569336 GSTO1P78417 241 aa12.01□□□□□ -0.49
CLN6-209ENST00000569336 CYP4F22Q6NT55 531 aa12.01□□□□□ -0.49
CLN6-209ENST00000569336 RGMBQ6NW40 437 aa12.01□□□□□ -0.49
CLN6-209ENST00000569336 ARMC9Q7Z3E5 817 aa12.01□□□□□ -0.49
CLN6-209ENST00000569336 EAF2Q96CJ1 260 aaPredicted RBP12.01□□□□□ -0.49
CLN6-209ENST00000569336 HOOK2Q96ED9 719 aa12.01□□□□□ -0.49
CLN6-209ENST00000569336 SCAF8Q9UPN6 1271 aaKnown RBP12.01□□□□□ -0.49
CLN6-209ENST00000569336 DAGLAQ9Y4D2 1042 aa12.01□□□□□ -0.49
CLN6-209ENST00000569336 PPP1R12BO60237 982 aaPredicted RBP12□□□□□ -0.49
CLN6-209ENST00000569336 IFIT2P09913 472 aaKnown RBP12□□□□□ -0.49
CLN6-209ENST00000569336 MAP2K2P36507 400 aa12□□□□□ -0.49
CLN6-209ENST00000569336 MAP2K1Q02750 393 aaPredicted RBP12□□□□□ -0.49
CLN6-209ENST00000569336 NOGQ13253 232 aa12□□□□□ -0.49
CLN6-209ENST00000569336 GRM1Q13255 1194 aa12□□□□□ -0.49
CLN6-209ENST00000569336 RASA3Q14644 834 aa12□□□□□ -0.49
CLN6-209ENST00000569336 DIXDC1Q155Q3 683 aa12□□□□□ -0.49
CLN6-209ENST00000569336 DLK2Q6UY11 383 aa12□□□□□ -0.49
CLN6-209ENST00000569336 FAM83AQ86UY5 434 aa12□□□□□ -0.49
CLN6-209ENST00000569336 CCDC102AQ96A19 550 aa12□□□□□ -0.49
CLN6-209ENST00000569336 NOL10Q9BSC4 688 aaKnown RBP12□□□□□ -0.49
CLN6-209ENST00000569336 LRRCC1Q9C099 1032 aa12□□□□□ -0.49
CLN6-209ENST00000569336 IL1RAPL2Q9NP60 686 aa12□□□□□ -0.49
CLN6-209ENST00000569336 RAI14Q9P0K7 980 aa12□□□□□ -0.49
CLN6-209ENST00000569336 LRP2BPQ9P2M1 347 aa12□□□□□ -0.49
CLN6-209ENST00000569336 MROH7-TTC4A0A0A0MT08 1334 aa12□□□□□ -0.49
CLN6-209ENST00000569336 GAKO14976 1311 aa12□□□□□ -0.49
CLN6-209ENST00000569336 UNCXA6NJT0 531 aa11.99□□□□□ -0.49
CLN6-209ENST00000569336 TCP10L2B9ZVM9 353 aa11.99□□□□□ -0.49
CLN6-209ENST00000569336 LDHCP07864 332 aa11.99□□□□□ -0.49
CLN6-209ENST00000569336 RGS19P49795 217 aa11.99□□□□□ -0.49
CLN6-209ENST00000569336 ZNF157P51786 506 aaPredicted RBP11.99□□□□□ -0.49
CLN6-209ENST00000569336 MECOMQ03112 1051 aa11.99□□□□□ -0.49
CLN6-209ENST00000569336 APOBEC3HQ6NTF7 200 aaKnown RBP11.99□□□□□ -0.49
CLN6-209ENST00000569336 TMED8Q6PL24 325 aaPredicted RBP11.99□□□□□ -0.49
CLN6-209ENST00000569336 PI16Q6UXB8 463 aa11.99□□□□□ -0.49
CLN6-209ENST00000569336 BEGAINQ9BUH8 593 aa11.99□□□□□ -0.49
CLN6-209ENST00000569336 CCDC8Q9H0W5 538 aaPredicted RBP11.99□□□□□ -0.49
CLN6-209ENST00000569336 TLR7Q9NYK1 1049 aaKnown RBP11.99□□□□□ -0.49
CLN6-209ENST00000569336 AOX1Q06278 1338 aa11.99□□□□□ -0.49
CLN6-209ENST00000569336 COL2A1P02458 1487 aaPredicted RBP11.99□□□□□ -0.49
CLN6-209ENST00000569336 RFX7Q2KHR2 1363 aa11.98□□□□□ -0.49
CLN6-209ENST00000569336 MAP4K4O95819 1239 aaPredicted RBP11.98□□□□□ -0.49
CLN6-209ENST00000569336 SLC10A3P09131 477 aa11.98□□□□□ -0.49
CLN6-209ENST00000569336 HSPA8P11142 646 aaKnown RBP11.98□□□□□ -0.49
CLN6-209ENST00000569336 IREB2P48200 963 aaKnown RBP11.98□□□□□ -0.49
CLN6-209ENST00000569336 PRAMEF18Q5VWM3 479 aa11.98□□□□□ -0.49
CLN6-209ENST00000569336 FAM163AQ96GL9 167 aaPredicted RBP11.98□□□□□ -0.49
CLN6-209ENST00000569336 GPATCH3Q96I76 525 aa11.98□□□□□ -0.49
CLN6-209ENST00000569336 CRBNQ96SW2 442 aa11.98□□□□□ -0.49
CLN6-209ENST00000569336 WBP1LQ9NX94 342 aa11.98□□□□□ -0.49
CLN6-209ENST00000569336 ANGEL1Q9UNK9 670 aaKnown RBP11.98□□□□□ -0.49
CLN6-209ENST00000569336 BTDP43251 543 aa11.97□□□□□ -0.49
CLN6-209ENST00000569336 TTF1Q15361 905 aaPredicted RBP11.97□□□□□ -0.49
CLN6-209ENST00000569336 CDC42EP5Q6NZY7 148 aa11.97□□□□□ -0.49
CLN6-209ENST00000569336 REM2Q8IYK8 340 aaPredicted RBP11.97□□□□□ -0.49
CLN6-209ENST00000569336 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.97□□□□□ -0.49
CLN6-209ENST00000569336 NSUN4Q96CB9 384 aaKnown RBP11.97□□□□□ -0.49
CLN6-209ENST00000569336 TMEM39BQ9GZU3 492 aa11.97□□□□□ -0.49
CLN6-209ENST00000569336 SNRKQ9NRH2 765 aa11.97□□□□□ -0.49
CLN6-209ENST00000569336 MGAMO43451 1857 aa11.97□□□□□ -0.49
CLN6-209ENST00000569336 CA12O43570 354 aa11.96□□□□□ -0.49
CLN6-209ENST00000569336 CYP2E1P05181 493 aaPredicted RBP11.96□□□□□ -0.49
CLN6-209ENST00000569336 PLCG2P16885 1265 aa11.96□□□□□ -0.49
CLN6-209ENST00000569336 ZAP70P43403 619 aa11.96□□□□□ -0.49
CLN6-209ENST00000569336 CACNB3P54284 484 aa11.96□□□□□ -0.49
CLN6-209ENST00000569336 MAP3K11Q16584 847 aa11.96□□□□□ -0.49
CLN6-209ENST00000569336 NBPF12Q5TAG4 269 aaPredicted RBP11.96□□□□□ -0.49
CLN6-209ENST00000569336 DCAF15Q66K64 600 aa11.96□□□□□ -0.49
CLN6-209ENST00000569336 NAA16Q6N069 864 aaPredicted RBP11.96□□□□□ -0.49
CLN6-209ENST00000569336 TBC1D9Q6ZT07 1266 aa11.96□□□□□ -0.49
CLN6-209ENST00000569336 RASAL3Q86YV0 1011 aa11.96□□□□□ -0.49
CLN6-209ENST00000569336 CERS3Q8IU89 383 aa11.96□□□□□ -0.49
CLN6-209ENST00000569336 FAM151AQ8WW52 585 aa11.96□□□□□ -0.49
CLN6-209ENST00000569336 TEPSINQ96N21 525 aa11.96□□□□□ -0.49
CLN6-209ENST00000569336 DCTPP1Q9H773 170 aa11.96□□□□□ -0.49
CLN6-209ENST00000569336 USP40Q9NVE5 1235 aa11.96□□□□□ -0.49
CLN6-209ENST00000569336 ZBTB47Q9UFB7 747 aaPredicted RBP11.96□□□□□ -0.49
CLN6-209ENST00000569336 LOC285556D6RIA3 1793 aa11.96□□□□□ -0.49
CLN6-209ENST00000569336 GPR75-ASB3A0A0A6YYF3 556 aa11.95□□□□□ -0.5
CLN6-209ENST00000569336 FAM155AB1AL88 458 aaPredicted RBP11.95□□□□□ -0.5
CLN6-209ENST00000569336 UBE2Q2LH0YL09 131 aa11.95□□□□□ -0.5
CLN6-209ENST00000569336 ENTPD3O75355 529 aa11.95□□□□□ -0.5
CLN6-209ENST00000569336 BAG3O95817 575 aa11.95□□□□□ -0.5
CLN6-209ENST00000569336 MAP3K12Q12852 859 aa11.95□□□□□ -0.5
CLN6-209ENST00000569336 PRKG1Q13976 671 aa11.95□□□□□ -0.5
CLN6-209ENST00000569336 MOB2Q70IA6 237 aa11.95□□□□□ -0.5
CLN6-209ENST00000569336 ANKRD13AQ8IZ07 590 aa11.95□□□□□ -0.5
CLN6-209ENST00000569336 IDI2Q9BXS1 227 aa11.95□□□□□ -0.5
CLN6-209ENST00000569336 BCL11AQ9H165 835 aa11.95□□□□□ -0.5
CLN6-209ENST00000569336 MYH4Q9Y623 1939 aa11.94□□□□□ -0.5
CLN6-209ENST00000569336 AOC2O75106 756 aa11.94□□□□□ -0.5
CLN6-209ENST00000569336 IDH1O75874 414 aaKnown RBP11.94□□□□□ -0.5
CLN6-209ENST00000569336 ZBTB48P10074 688 aaPredicted RBP11.94□□□□□ -0.5
CLN6-209ENST00000569336 LDLRAD1Q5T700 205 aa11.94□□□□□ -0.5
CLN6-209ENST00000569336 PCDHB15Q9Y5E8 787 aa11.94□□□□□ -0.5
CLN6-209ENST00000569336 CSADQ9Y600 493 aa11.94□□□□□ -0.5
CLN6-209ENST00000569336 ATRNL1Q5VV63 1379 aa11.93□□□□□ -0.5
CLN6-209ENST00000569336 NPM3O75607 178 aaKnown RBP11.93□□□□□ -0.5
CLN6-209ENST00000569336 ATP5JP18859 108 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms