RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 REM2Q8IYK8 340 aaPredicted RBP17.75■□□□□ 0.43
COMMD4-225ENST00000569245 USP40Q9NVE5 1235 aa17.75■□□□□ 0.43
COMMD4-225ENST00000569245 EXOC6BQ9Y2D4 811 aa17.75■□□□□ 0.43
COMMD4-225ENST00000569245 HSP90AB4PQ58FF6 505 aa17.74■□□□□ 0.43
COMMD4-225ENST00000569245 CDC42EP5Q6NZY7 148 aa17.74■□□□□ 0.43
COMMD4-225ENST00000569245 PI16Q6UXB8 463 aa17.74■□□□□ 0.43
COMMD4-225ENST00000569245 ERC1Q8IUD2 1116 aa17.74■□□□□ 0.43
COMMD4-225ENST00000569245 CDAN1Q8IWY9 1227 aa17.74■□□□□ 0.43
COMMD4-225ENST00000569245 RPAP2Q8IXW5 612 aaPredicted RBP17.74■□□□□ 0.43
COMMD4-225ENST00000569245 TEPSINQ96N21 525 aa17.74■□□□□ 0.43
COMMD4-225ENST00000569245 CSRNP1Q96S65 589 aa17.74■□□□□ 0.43
COMMD4-225ENST00000569245 DBNDD2Q9BQY9 259 aa17.74■□□□□ 0.43
COMMD4-225ENST00000569245 ARAP2Q8WZ64 1704 aa17.74■□□□□ 0.43
COMMD4-225ENST00000569245 THSD7BQ9C0I4 1608 aa17.73■□□□□ 0.43
COMMD4-225ENST00000569245 USP2O75604 605 aaPredicted RBP17.73■□□□□ 0.43
COMMD4-225ENST00000569245 ARID4AP29374 1257 aaPredicted RBP17.73■□□□□ 0.43
COMMD4-225ENST00000569245 MAP3K11Q16584 847 aa17.73■□□□□ 0.43
COMMD4-225ENST00000569245 IFFO2Q5TF58 517 aa17.73■□□□□ 0.43
COMMD4-225ENST00000569245 FKBP1CQ5VVH2 108 aa17.73■□□□□ 0.43
COMMD4-225ENST00000569245 TBC1D9Q6ZT07 1266 aa17.73■□□□□ 0.43
COMMD4-225ENST00000569245 FAM83AQ86UY5 434 aa17.73■□□□□ 0.43
COMMD4-225ENST00000569245 CCDC8Q9H0W5 538 aaPredicted RBP17.73■□□□□ 0.43
COMMD4-225ENST00000569245 BCL11AQ9H165 835 aa17.73■□□□□ 0.43
COMMD4-225ENST00000569245 RAI14Q9P0K7 980 aa17.73■□□□□ 0.43
COMMD4-225ENST00000569245 SSC5DA1L4H1 1573 aa17.72■□□□□ 0.43
COMMD4-225ENST00000569245 APBB1O00213 710 aa17.72■□□□□ 0.43
COMMD4-225ENST00000569245 TRPA1O75762 1119 aa17.72■□□□□ 0.43
COMMD4-225ENST00000569245 MCAMP43121 646 aa17.72■□□□□ 0.43
COMMD4-225ENST00000569245 TCP10Q12799 353 aa17.72■□□□□ 0.43
COMMD4-225ENST00000569245 ANKRD13AQ8IZ07 590 aa17.72■□□□□ 0.43
COMMD4-225ENST00000569245 HOOK2Q96ED9 719 aa17.72■□□□□ 0.43
COMMD4-225ENST00000569245 CLMNQ96JQ2 1002 aa17.72■□□□□ 0.43
COMMD4-225ENST00000569245 SNRKQ9NRH2 765 aa17.72■□□□□ 0.43
COMMD4-225ENST00000569245 RNF186Q9NXI6 227 aa17.72■□□□□ 0.43
COMMD4-225ENST00000569245 LRP2BPQ9P2M1 347 aa17.72■□□□□ 0.43
COMMD4-225ENST00000569245 GSTO1P78417 241 aa17.71■□□□□ 0.43
COMMD4-225ENST00000569245 MECOMQ03112 1051 aa17.71■□□□□ 0.43
COMMD4-225ENST00000569245 SPRYD7Q5W111 196 aa17.71■□□□□ 0.43
COMMD4-225ENST00000569245 EAF2Q96CJ1 260 aaPredicted RBP17.71■□□□□ 0.43
COMMD4-225ENST00000569245 PCDHB15Q9Y5E8 787 aa17.71■□□□□ 0.43
COMMD4-225ENST00000569245 UNCXA6NJT0 531 aa17.7■□□□□ 0.42
COMMD4-225ENST00000569245 AACSQ86V21 672 aa17.7■□□□□ 0.42
COMMD4-225ENST00000569245 FAM151AQ8WW52 585 aa17.7■□□□□ 0.42
COMMD4-225ENST00000569245 CCDC136Q96JN2 1154 aa17.7■□□□□ 0.42
COMMD4-225ENST00000569245 SAGE1Q9NXZ1 904 aa17.7■□□□□ 0.42
COMMD4-225ENST00000569245 TLR7Q9NYK1 1049 aaKnown RBP17.7■□□□□ 0.42
COMMD4-225ENST00000569245 DBNLQ9UJU6 430 aaKnown RBP17.7■□□□□ 0.42
COMMD4-225ENST00000569245 LDHCP07864 332 aa17.69■□□□□ 0.42
COMMD4-225ENST00000569245 BTDP43251 543 aa17.69■□□□□ 0.42
COMMD4-225ENST00000569245 SREBF2Q12772 1141 aa17.69■□□□□ 0.42
COMMD4-225ENST00000569245 NFIAQ12857 509 aa17.69■□□□□ 0.42
COMMD4-225ENST00000569245 SIRT2Q8IXJ6 389 aa17.69■□□□□ 0.42
COMMD4-225ENST00000569245 WNK4Q96J92 1243 aa17.69■□□□□ 0.42
COMMD4-225ENST00000569245 ELP3Q9H9T3 547 aa17.69■□□□□ 0.42
COMMD4-225ENST00000569245 IL1RAPL2Q9NP60 686 aa17.69■□□□□ 0.42
COMMD4-225ENST00000569245 CSADQ9Y600 493 aa17.69■□□□□ 0.42
COMMD4-225ENST00000569245 ECM29Q5VYK3 1845 aa17.69■□□□□ 0.42
COMMD4-225ENST00000569245 MROH7-TTC4A0A0A0MT08 1334 aa17.69■□□□□ 0.42
COMMD4-225ENST00000569245 GAKO14976 1311 aa17.69■□□□□ 0.42
COMMD4-225ENST00000569245 MYH13Q9UKX3 1938 aa17.68■□□□□ 0.42
COMMD4-225ENST00000569245 MAP3K9P80192 1104 aa17.68■□□□□ 0.42
COMMD4-225ENST00000569245 DCAF15Q66K64 600 aa17.68■□□□□ 0.42
COMMD4-225ENST00000569245 B4GALNT3Q6L9W6 998 aa17.68■□□□□ 0.42
COMMD4-225ENST00000569245 MIGA2Q7L4E1 593 aa17.68■□□□□ 0.42
COMMD4-225ENST00000569245 RHPN1Q8TCX5 695 aa17.68■□□□□ 0.42
COMMD4-225ENST00000569245 FAM163AQ96GL9 167 aaPredicted RBP17.68■□□□□ 0.42
COMMD4-225ENST00000569245 ZBTB48P10074 688 aaPredicted RBP17.67■□□□□ 0.42
COMMD4-225ENST00000569245 TM4SF4P48230 202 aa17.67■□□□□ 0.42
COMMD4-225ENST00000569245 CLASRPQ8N2M8 674 aaKnown RBP17.67■□□□□ 0.42
COMMD4-225ENST00000569245 NSUN4Q96CB9 384 aaKnown RBP17.67■□□□□ 0.42
COMMD4-225ENST00000569245 KIF1BPQ96EK5 621 aa17.67■□□□□ 0.42
COMMD4-225ENST00000569245 ZNF512BQ96KM6 892 aaPredicted RBP17.67■□□□□ 0.42
COMMD4-225ENST00000569245 WRNIP1Q96S55 665 aa17.67■□□□□ 0.42
COMMD4-225ENST00000569245 NOL10Q9BSC4 688 aaKnown RBP17.67■□□□□ 0.42
COMMD4-225ENST00000569245 FAM198AQ9UFP1 575 aa17.67■□□□□ 0.42
COMMD4-225ENST00000569245 GPR75-ASB3A0A0A6YYF3 556 aa17.66■□□□□ 0.42
COMMD4-225ENST00000569245 MANSC4A6NHS7 340 aaPredicted RBP17.66■□□□□ 0.42
COMMD4-225ENST00000569245 RAB11FIP3O75154 756 aa17.66■□□□□ 0.42
COMMD4-225ENST00000569245 ZAP70P43403 619 aa17.66■□□□□ 0.42
COMMD4-225ENST00000569245 RGS3P49796 1198 aa17.66■□□□□ 0.42
COMMD4-225ENST00000569245 PICALMQ13492 652 aa17.66■□□□□ 0.42
COMMD4-225ENST00000569245 HDAC1Q13547 482 aaPredicted RBP17.66■□□□□ 0.42
COMMD4-225ENST00000569245 VGLL4Q14135 290 aa17.66■□□□□ 0.42
COMMD4-225ENST00000569245 NAA16Q6N069 864 aaPredicted RBP17.66■□□□□ 0.42
COMMD4-225ENST00000569245 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.66■□□□□ 0.42
COMMD4-225ENST00000569245 ZSCAN29Q8IWY8 852 aaPredicted RBP17.66■□□□□ 0.42
COMMD4-225ENST00000569245 OPTNQ96CV9 577 aa17.66■□□□□ 0.42
COMMD4-225ENST00000569245 ZNF341Q9BYN7 854 aa17.66■□□□□ 0.42
COMMD4-225ENST00000569245 ENTPD3O75355 529 aa17.65■□□□□ 0.42
COMMD4-225ENST00000569245 CAPN15O75808 1086 aa17.65■□□□□ 0.42
COMMD4-225ENST00000569245 CYP2E1P05181 493 aaPredicted RBP17.65■□□□□ 0.42
COMMD4-225ENST00000569245 IFIT2P09913 472 aaKnown RBP17.65■□□□□ 0.42
COMMD4-225ENST00000569245 INHBEP58166 350 aa17.65■□□□□ 0.42
COMMD4-225ENST00000569245 ZFPM1Q8IX07 1006 aa17.65■□□□□ 0.42
COMMD4-225ENST00000569245 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.65■□□□□ 0.42
COMMD4-225ENST00000569245 ZNF384Q8TF68 577 aa17.65■□□□□ 0.42
COMMD4-225ENST00000569245 IDI2Q9BXS1 227 aa17.65■□□□□ 0.42
COMMD4-225ENST00000569245 RWDD1Q9H446 243 aaPredicted RBP17.65■□□□□ 0.42
COMMD4-225ENST00000569245 TBC1D8O95759 1140 aa17.64■□□□□ 0.41
COMMD4-225ENST00000569245 ZKSCAN4Q969J2 545 aaPredicted RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms