RNA–Protein interactions for RNA: ENST00000568945.2

MKRN3-204, Transcript of makorin ring finger protein 3, human

TSL 4

Gene MKRN3, Length 2,740 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MKRN3-204	ENST00000568945	PRPF40A	O75400	957 aa	Known RBP	11.48	□□□□□ -0.57
MKRN3-204	ENST00000568945	USP11	P51784	963 aa		11.48	□□□□□ -0.57
MKRN3-204	ENST00000568945	GRIK3	Q13003	919 aa		11.48	□□□□□ -0.57
MKRN3-204	ENST00000568945	RASSF3	Q86WH2	238 aa		11.48	□□□□□ -0.57
MKRN3-204	ENST00000568945	FAM114A1	Q8IWE2	563 aa		11.48	□□□□□ -0.57
MKRN3-204	ENST00000568945	ZNF483	Q8TF39	744 aa	Predicted RBP	11.48	□□□□□ -0.57
MKRN3-204	ENST00000568945	MIEF2	Q96C03	454 aa		11.48	□□□□□ -0.57
MKRN3-204	ENST00000568945	FRMD6	Q96NE9	622 aa		11.48	□□□□□ -0.57
MKRN3-204	ENST00000568945	SSX2IP	Q9Y2D8	614 aa		11.48	□□□□□ -0.57
MKRN3-204	ENST00000568945	NOSIP	Q9Y314	301 aa	Known RBP	11.48	□□□□□ -0.57
MKRN3-204	ENST00000568945	LUC7L2	Q9Y383	392 aa	Known RBP	11.48	□□□□□ -0.57
MKRN3-204	ENST00000568945	VPS8	Q8N3P4	1428 aa		11.48	□□□□□ -0.57
MKRN3-204	ENST00000568945	PYGB	P11216	843 aa		11.48	□□□□□ -0.57
MKRN3-204	ENST00000568945	RASA1	P20936	1047 aa		11.48	□□□□□ -0.57
MKRN3-204	ENST00000568945	MRE11	P49959	708 aa		11.48	□□□□□ -0.57
MKRN3-204	ENST00000568945	MPP3	Q13368	585 aa		11.48	□□□□□ -0.57
MKRN3-204	ENST00000568945	NOLC1	Q14978	699 aa	Known RBP eCLIP	11.48	□□□□□ -0.57
MKRN3-204	ENST00000568945	LRRC41	Q15345	812 aa		11.48	□□□□□ -0.57
MKRN3-204	ENST00000568945	TERF2	Q15554	542 aa		11.48	□□□□□ -0.57
MKRN3-204	ENST00000568945	ALF	Q53S48	1182 aa		11.48	□□□□□ -0.57
MKRN3-204	ENST00000568945	GALNT17	Q6IS24	598 aa		11.48	□□□□□ -0.57
MKRN3-204	ENST00000568945	IFNL3	Q8IZI9	196 aa		11.48	□□□□□ -0.57
MKRN3-204	ENST00000568945	OSBPL10	Q9BXB5	764 aa		11.48	□□□□□ -0.57
MKRN3-204	ENST00000568945	IRX2	Q9BZI1	471 aa	Predicted RBP	11.48	□□□□□ -0.57
MKRN3-204	ENST00000568945	LUZP4	Q9P127	313 aa		11.48	□□□□□ -0.57
MKRN3-204	ENST00000568945	GOLGA6L10	A0A0M3HER8	536 aa		11.47	□□□□□ -0.57
MKRN3-204	ENST00000568945	SPDYE2B	A6NHP3	402 aa		11.47	□□□□□ -0.57
MKRN3-204	ENST00000568945	SPDYE5	A6NIY4	337 aa		11.47	□□□□□ -0.57
MKRN3-204	ENST00000568945	SPDYE6	P0CI01	402 aa		11.47	□□□□□ -0.57
MKRN3-204	ENST00000568945	TNNI2	P48788	182 aa		11.47	□□□□□ -0.57
MKRN3-204	ENST00000568945	SPDYE2	Q495Y8	402 aa		11.47	□□□□□ -0.57
MKRN3-204	ENST00000568945	ARHGAP27	Q6ZUM4	889 aa		11.47	□□□□□ -0.57
MKRN3-204	ENST00000568945	OR8H2	Q8N162	312 aa		11.47	□□□□□ -0.57
MKRN3-204	ENST00000568945	BRSK1	Q8TDC3	778 aa		11.47	□□□□□ -0.57
MKRN3-204	ENST00000568945	MAML1	Q92585	1016 aa		11.47	□□□□□ -0.57
MKRN3-204	ENST00000568945	MAGED1	Q9Y5V3	778 aa	Predicted RBP	11.47	□□□□□ -0.57
MKRN3-204	ENST00000568945	NCKAP5L	Q9HCH0	1330 aa		11.47	□□□□□ -0.57
MKRN3-204	ENST00000568945	EIF4B	P23588	611 aa	Known RBP	11.47	□□□□□ -0.57
MKRN3-204	ENST00000568945	SEC13	P55735	322 aa		11.47	□□□□□ -0.57
MKRN3-204	ENST00000568945	ITIH3	Q06033	890 aa		11.47	□□□□□ -0.57
MKRN3-204	ENST00000568945	HYI	Q5T013	277 aa		11.47	□□□□□ -0.57
MKRN3-204	ENST00000568945	RTL10	Q7L3V2	364 aa		11.47	□□□□□ -0.57
MKRN3-204	ENST00000568945	MILR1	Q7Z6M3	343 aa		11.47	□□□□□ -0.57
MKRN3-204	ENST00000568945	RSAD2	Q8WXG1	361 aa		11.47	□□□□□ -0.57
MKRN3-204	ENST00000568945	TYW1	Q9NV66	732 aa	Known RBP	11.47	□□□□□ -0.57
MKRN3-204	ENST00000568945	CEP131	Q9UPN4	1083 aa		11.47	□□□□□ -0.57
MKRN3-204	ENST00000568945	CNPY2	Q9Y2B0	182 aa		11.47	□□□□□ -0.57
MKRN3-204	ENST00000568945	EVC2	Q86UK5	1308 aa		11.47	□□□□□ -0.57
MKRN3-204	ENST00000568945	PYGL	P06737	847 aa		11.46	□□□□□ -0.57
MKRN3-204	ENST00000568945	TPM1	P09493	284 aa		11.46	□□□□□ -0.57
MKRN3-204	ENST00000568945	PKN2	Q16513	984 aa	Known RBP	11.46	□□□□□ -0.57
MKRN3-204	ENST00000568945	HNRNPUL2	Q1KMD3	747 aa	Known RBP	11.46	□□□□□ -0.57
MKRN3-204	ENST00000568945	TRERF1	Q96PN7	1200 aa		11.46	□□□□□ -0.57
MKRN3-204	ENST00000568945	STAM2	O75886	525 aa		11.46	□□□□□ -0.58
MKRN3-204	ENST00000568945	HVCN1	Q96D96	273 aa		11.46	□□□□□ -0.58
MKRN3-204	ENST00000568945	KRT82	Q9NSB4	513 aa		11.46	□□□□□ -0.58
MKRN3-204	ENST00000568945	AP1G2	O75843	785 aa		11.45	□□□□□ -0.58
MKRN3-204	ENST00000568945	ACAP1	Q15027	740 aa		11.45	□□□□□ -0.58
MKRN3-204	ENST00000568945	TTC31	Q49AM3	519 aa	Predicted RBP	11.45	□□□□□ -0.58
MKRN3-204	ENST00000568945	SLC10A5	Q5PT55	438 aa		11.45	□□□□□ -0.58
MKRN3-204	ENST00000568945	CATSPER4	Q7RTX7	472 aa		11.45	□□□□□ -0.58
MKRN3-204	ENST00000568945	SPATA21	Q7Z572	469 aa		11.45	□□□□□ -0.58
MKRN3-204	ENST00000568945	TEX9	Q8N6V9	391 aa		11.45	□□□□□ -0.58
MKRN3-204	ENST00000568945	RABGGTA	Q92696	567 aa		11.45	□□□□□ -0.58
MKRN3-204	ENST00000568945	RELT	Q969Z4	430 aa		11.45	□□□□□ -0.58
MKRN3-204	ENST00000568945	ARMC5	Q96C12	935 aa		11.45	□□□□□ -0.58
MKRN3-204	ENST00000568945	DISC1	Q9NRI5	854 aa		11.45	□□□□□ -0.58
MKRN3-204	ENST00000568945	PIH1D1	Q9NWS0	290 aa	Known RBP	11.45	□□□□□ -0.58
MKRN3-204	ENST00000568945	SCAMP3	O14828	347 aa	Known RBP	11.45	□□□□□ -0.58
MKRN3-204	ENST00000568945	CLASP2	O75122	1294 aa	Known RBP	11.45	□□□□□ -0.58
MKRN3-204	ENST00000568945	PECAM1	P16284	738 aa	Predicted RBP	11.45	□□□□□ -0.58
MKRN3-204	ENST00000568945	SMUG1	Q53HV7	270 aa		11.45	□□□□□ -0.58
MKRN3-204	ENST00000568945	MEX3C	Q5U5Q3	659 aa	Known RBP	11.45	□□□□□ -0.58
MKRN3-204	ENST00000568945	BEND5	Q7L4P6	421 aa		11.45	□□□□□ -0.58
MKRN3-204	ENST00000568945	PHACTR1	Q9C0D0	580 aa		11.45	□□□□□ -0.58
MKRN3-204	ENST00000568945	CNNM2	Q9H8M5	875 aa		11.45	□□□□□ -0.58
MKRN3-204	ENST00000568945	SOS1	Q07889	1333 aa	Predicted RBP	11.44	□□□□□ -0.58
MKRN3-204	ENST00000568945	KDM4F	A0A1W2PPD8	638 aa		11.44	□□□□□ -0.58
MKRN3-204	ENST00000568945	BHMG1	C9JSJ3	638 aa	Predicted RBP	11.44	□□□□□ -0.58
MKRN3-204	ENST00000568945	CSPG5	O95196	566 aa		11.44	□□□□□ -0.58
MKRN3-204	ENST00000568945	RPSA	P08865	295 aa	Known RBP	11.44	□□□□□ -0.58
MKRN3-204	ENST00000568945	NOS2	P35228	1153 aa		11.44	□□□□□ -0.58
MKRN3-204	ENST00000568945	PLA2G4A	P47712	749 aa		11.44	□□□□□ -0.58
MKRN3-204	ENST00000568945	CCNH	P51946	323 aa	Predicted RBP	11.44	□□□□□ -0.58
MKRN3-204	ENST00000568945	HDAC4	P56524	1084 aa		11.44	□□□□□ -0.58
MKRN3-204	ENST00000568945	CCDC186	Q7Z3E2	898 aa		11.44	□□□□□ -0.58
MKRN3-204	ENST00000568945	TNIP2	Q8NFZ5	429 aa		11.44	□□□□□ -0.58
MKRN3-204	ENST00000568945		M0QX08	132 aa		11.44	□□□□□ -0.58
MKRN3-204	ENST00000568945	RAC2	P15153	192 aa		11.44	□□□□□ -0.58
MKRN3-204	ENST00000568945	MSN	P26038	577 aa	Known RBP	11.44	□□□□□ -0.58
MKRN3-204	ENST00000568945	MNAT1	P51948	309 aa		11.44	□□□□□ -0.58
MKRN3-204	ENST00000568945	MDM2	Q00987	491 aa	Predicted RBP	11.44	□□□□□ -0.58
MKRN3-204	ENST00000568945	PHLDB3	Q6NSJ2	640 aa		11.44	□□□□□ -0.58
MKRN3-204	ENST00000568945	SLAIN1	Q8ND83	568 aa		11.44	□□□□□ -0.58
MKRN3-204	ENST00000568945	MIPOL1	Q8TD10	442 aa		11.44	□□□□□ -0.58
MKRN3-204	ENST00000568945	SELENOO	Q9BVL4	669 aa		11.44	□□□□□ -0.58
MKRN3-204	ENST00000568945	C9orf78	Q9NZ63	289 aa	Predicted RBP	11.44	□□□□□ -0.58
MKRN3-204	ENST00000568945	SPO11	Q9Y5K1	396 aa		11.44	□□□□□ -0.58
MKRN3-204	ENST00000568945	ARIH2	O95376	493 aa		11.44	□□□□□ -0.58
MKRN3-204	ENST00000568945	NBPF8	Q3BBV2	869 aa		11.44	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms