RNA–Protein interactions for RNA: ENST00000568292.1

CDH3-207, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-207ENST00000568292 USP40Q9NVE5 1235 aa12.64□□□□□ -0.39
CDH3-207ENST00000568292 HMG20BQ9P0W2 317 aa12.64□□□□□ -0.39
CDH3-207ENST00000568292 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.64□□□□□ -0.39
CDH3-207ENST00000568292 FZD1Q9UP38 647 aa12.64□□□□□ -0.39
CDH3-207ENST00000568292 DAGLAQ9Y4D2 1042 aa12.64□□□□□ -0.39
CDH3-207ENST00000568292 TRPA1O75762 1119 aa12.63□□□□□ -0.39
CDH3-207ENST00000568292 TM4SF4P48230 202 aa12.63□□□□□ -0.39
CDH3-207ENST00000568292 INHBEP58166 350 aa12.63□□□□□ -0.39
CDH3-207ENST00000568292 GSTO1P78417 241 aa12.63□□□□□ -0.39
CDH3-207ENST00000568292 SPRYD7Q5W111 196 aa12.63□□□□□ -0.39
CDH3-207ENST00000568292 CDC42EP5Q6NZY7 148 aa12.63□□□□□ -0.39
CDH3-207ENST00000568292 FAM151AQ8WW52 585 aa12.63□□□□□ -0.39
CDH3-207ENST00000568292 DBNDD2Q9BQY9 259 aa12.63□□□□□ -0.39
CDH3-207ENST00000568292 RNF186Q9NXI6 227 aa12.63□□□□□ -0.39
CDH3-207ENST00000568292 SAGE1Q9NXZ1 904 aa12.63□□□□□ -0.39
CDH3-207ENST00000568292 TSKSQ9UJT2 592 aa12.63□□□□□ -0.39
CDH3-207ENST00000568292 MAP3K9P80192 1104 aa12.62□□□□□ -0.39
CDH3-207ENST00000568292 SREBF2Q12772 1141 aa12.62□□□□□ -0.39
CDH3-207ENST00000568292 MKRN3Q13064 507 aaKnown RBP12.62□□□□□ -0.39
CDH3-207ENST00000568292 ZNF512BQ96KM6 892 aaPredicted RBP12.62□□□□□ -0.39
CDH3-207ENST00000568292 CCDC8Q9H0W5 538 aaPredicted RBP12.62□□□□□ -0.39
CDH3-207ENST00000568292 LRP2BPQ9P2M1 347 aa12.62□□□□□ -0.39
CDH3-207ENST00000568292 MCAMP43121 646 aa12.61□□□□□ -0.39
CDH3-207ENST00000568292 MECOMQ03112 1051 aa12.61□□□□□ -0.39
CDH3-207ENST00000568292 C20orf194Q5TEA3 1177 aa12.61□□□□□ -0.39
CDH3-207ENST00000568292 DCAF15Q66K64 600 aa12.61□□□□□ -0.39
CDH3-207ENST00000568292 TBC1D9Q6ZT07 1266 aa12.61□□□□□ -0.39
CDH3-207ENST00000568292 EAF2Q96CJ1 260 aaPredicted RBP12.61□□□□□ -0.39
CDH3-207ENST00000568292 CLMNQ96JQ2 1002 aa12.61□□□□□ -0.39
CDH3-207ENST00000568292 RAI14Q9P0K7 980 aa12.61□□□□□ -0.39
CDH3-207ENST00000568292 EXOC6BQ9Y2D4 811 aa12.61□□□□□ -0.39
CDH3-207ENST00000568292 THSD7BQ9C0I4 1608 aa12.61□□□□□ -0.39
CDH3-207ENST00000568292 MANSC4A6NHS7 340 aaPredicted RBP12.6□□□□□ -0.39
CDH3-207ENST00000568292 IGSF3O75054 1194 aa12.6□□□□□ -0.39
CDH3-207ENST00000568292 RAB11FIP3O75154 756 aa12.6□□□□□ -0.39
CDH3-207ENST00000568292 MAP4K4O95819 1239 aaPredicted RBP12.6□□□□□ -0.39
CDH3-207ENST00000568292 ZBTB48P10074 688 aaPredicted RBP12.6□□□□□ -0.39
CDH3-207ENST00000568292 TCP10Q12799 353 aa12.6□□□□□ -0.39
CDH3-207ENST00000568292 RHPN1Q8TCX5 695 aa12.6□□□□□ -0.39
CDH3-207ENST00000568292 WNK4Q96J92 1243 aa12.6□□□□□ -0.39
CDH3-207ENST00000568292 IDI2Q9BXS1 227 aa12.6□□□□□ -0.39
CDH3-207ENST00000568292 BCL11AQ9H165 835 aa12.6□□□□□ -0.39
CDH3-207ENST00000568292 SNRKQ9NRH2 765 aa12.6□□□□□ -0.39
CDH3-207ENST00000568292 GAKO14976 1311 aa12.6□□□□□ -0.39
CDH3-207ENST00000568292 GPR75-ASB3A0A0A6YYF3 556 aa12.59□□□□□ -0.39
CDH3-207ENST00000568292 ENTPD3O75355 529 aa12.59□□□□□ -0.39
CDH3-207ENST00000568292 BTDP43251 543 aa12.59□□□□□ -0.39
CDH3-207ENST00000568292 PI16Q6UXB8 463 aa12.59□□□□□ -0.39
CDH3-207ENST00000568292 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.59□□□□□ -0.39
CDH3-207ENST00000568292 AACSQ86V21 672 aa12.59□□□□□ -0.39
CDH3-207ENST00000568292 CDAN1Q8IWY9 1227 aa12.59□□□□□ -0.39
CDH3-207ENST00000568292 SIRT2Q8IXJ6 389 aa12.59□□□□□ -0.39
CDH3-207ENST00000568292 CLASRPQ8N2M8 674 aaKnown RBP12.59□□□□□ -0.39
CDH3-207ENST00000568292 NSUN4Q96CB9 384 aaKnown RBP12.59□□□□□ -0.39
CDH3-207ENST00000568292 KIF1BPQ96EK5 621 aa12.59□□□□□ -0.39
CDH3-207ENST00000568292 FAM198AQ9UFP1 575 aa12.59□□□□□ -0.39
CDH3-207ENST00000568292 DBNLQ9UJU6 430 aaKnown RBP12.59□□□□□ -0.39
CDH3-207ENST00000568292 CSADQ9Y600 493 aa12.59□□□□□ -0.39
CDH3-207ENST00000568292 ECM29Q5VYK3 1845 aa12.59□□□□□ -0.39
CDH3-207ENST00000568292 SSC5DA1L4H1 1573 aa12.59□□□□□ -0.39
CDH3-207ENST00000568292 ARAP2Q8WZ64 1704 aa12.59□□□□□ -0.39
CDH3-207ENST00000568292 MROH7-TTC4A0A0A0MT08 1334 aa12.59□□□□□ -0.39
CDH3-207ENST00000568292 CEP350Q5VT06 3117 aa12.58□□□□□ -0.4
CDH3-207ENST00000568292 ALDH1A1P00352 501 aa12.58□□□□□ -0.4
CDH3-207ENST00000568292 ZAP70P43403 619 aa12.58□□□□□ -0.4
CDH3-207ENST00000568292 NFIAQ12857 509 aa12.58□□□□□ -0.4
CDH3-207ENST00000568292 OTUD7BQ6GQQ9 843 aa12.58□□□□□ -0.4
CDH3-207ENST00000568292 MIGA2Q7L4E1 593 aa12.58□□□□□ -0.4
CDH3-207ENST00000568292 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.58□□□□□ -0.4
CDH3-207ENST00000568292 YTHDC1Q96MU7 727 aaKnown RBP12.58□□□□□ -0.4
CDH3-207ENST00000568292 NOL10Q9BSC4 688 aaKnown RBP12.58□□□□□ -0.4
CDH3-207ENST00000568292 ZNF341Q9BYN7 854 aa12.58□□□□□ -0.4
CDH3-207ENST00000568292 ELP3Q9H9T3 547 aa12.58□□□□□ -0.4
CDH3-207ENST00000568292 APBB1O00213 710 aa12.57□□□□□ -0.4
CDH3-207ENST00000568292 TBC1D8O95759 1140 aa12.57□□□□□ -0.4
CDH3-207ENST00000568292 BAG3O95817 575 aa12.57□□□□□ -0.4
CDH3-207ENST00000568292 CYP2E1P05181 493 aaPredicted RBP12.57□□□□□ -0.4
CDH3-207ENST00000568292 RGS3P49796 1198 aa12.57□□□□□ -0.4
CDH3-207ENST00000568292 NAA16Q6N069 864 aaPredicted RBP12.57□□□□□ -0.4
CDH3-207ENST00000568292 ZSCAN29Q8IWY8 852 aaPredicted RBP12.57□□□□□ -0.4
CDH3-207ENST00000568292 ZFPM1Q8IX07 1006 aa12.57□□□□□ -0.4
CDH3-207ENST00000568292 ZNF384Q8TF68 577 aa12.57□□□□□ -0.4
CDH3-207ENST00000568292 OPTNQ96CV9 577 aa12.57□□□□□ -0.4
CDH3-207ENST00000568292 IL1RAPL2Q9NP60 686 aa12.57□□□□□ -0.4
CDH3-207ENST00000568292 TLR7Q9NYK1 1049 aaKnown RBP12.57□□□□□ -0.4
CDH3-207ENST00000568292 RPAP1Q9BWH6 1393 aaPredicted RBP12.56□□□□□ -0.4
CDH3-207ENST00000568292 NPM3O75607 178 aaKnown RBP12.56□□□□□ -0.4
CDH3-207ENST00000568292 IFIT2P09913 472 aaKnown RBP12.56□□□□□ -0.4
CDH3-207ENST00000568292 GJA5P36382 358 aa12.56□□□□□ -0.4
CDH3-207ENST00000568292 RHBDL3P58872 404 aa12.56□□□□□ -0.4
CDH3-207ENST00000568292 VGLL4Q14135 290 aa12.56□□□□□ -0.4
CDH3-207ENST00000568292 ERO1BQ86YB8 467 aa12.56□□□□□ -0.4
CDH3-207ENST00000568292 IFNL1Q8IU54 200 aa12.56□□□□□ -0.4
CDH3-207ENST00000568292 ZKSCAN4Q969J2 545 aaPredicted RBP12.56□□□□□ -0.4
CDH3-207ENST00000568292 WRNIP1Q96S55 665 aa12.56□□□□□ -0.4
CDH3-207ENST00000568292 ZNF112Q9UJU3 913 aa12.56□□□□□ -0.4
CDH3-207ENST00000568292 MYH13Q9UKX3 1938 aa12.55□□□□□ -0.4
CDH3-207ENST00000568292 TESPA1A2RU30 521 aaPredicted RBP12.55□□□□□ -0.4
CDH3-207ENST00000568292 WDHD1O75717 1129 aaPredicted RBP12.55□□□□□ -0.4
CDH3-207ENST00000568292 PLCG2P16885 1265 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms