RNA–Protein interactions for RNA: ENST00000567806.1

GTF3C1-207, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 4

Gene GTF3C1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-207ENST00000567806 MIGA2Q7L4E1 593 aa23.42■■□□□ 1.34
GTF3C1-207ENST00000567806 FAM43AQ8N2R8 423 aa23.42■■□□□ 1.34
GTF3C1-207ENST00000567806 LRRFIP2Q9Y608 721 aaKnown RBP23.42■■□□□ 1.34
GTF3C1-207ENST00000567806 DENND2AQ9ULE3 1009 aa23.41■■□□□ 1.34
GTF3C1-207ENST00000567806 DAGLAQ9Y4D2 1042 aa23.41■■□□□ 1.34
GTF3C1-207ENST00000567806 LAMB1P07942 1786 aa23.4■■□□□ 1.34
GTF3C1-207ENST00000567806 TCP10Q12799 353 aa23.4■■□□□ 1.34
GTF3C1-207ENST00000567806 PPIL2Q13356 520 aa23.4■■□□□ 1.34
GTF3C1-207ENST00000567806 DIXDC1Q155Q3 683 aa23.4■■□□□ 1.34
GTF3C1-207ENST00000567806 CDC42EP5Q6NZY7 148 aa23.4■■□□□ 1.34
GTF3C1-207ENST00000567806 OTOFQ9HC10 1997 aa23.4■■□□□ 1.34
GTF3C1-207ENST00000567806 IRF6O14896 467 aa23.39■■□□□ 1.33
GTF3C1-207ENST00000567806 SEMA3EO15041 775 aa23.39■■□□□ 1.33
GTF3C1-207ENST00000567806 PRDX5P30044 214 aa23.39■■□□□ 1.33
GTF3C1-207ENST00000567806 ZCCHC17Q9NP64 241 aaKnown RBP23.39■■□□□ 1.33
GTF3C1-207ENST00000567806 USP40Q9NVE5 1235 aa23.39■■□□□ 1.33
GTF3C1-207ENST00000567806 PA2G4Q9UQ80 394 aaKnown RBP23.39■■□□□ 1.33
GTF3C1-207ENST00000567806 RPAP1Q9BWH6 1393 aaPredicted RBP23.39■■□□□ 1.33
GTF3C1-207ENST00000567806 POTEFA5A3E0 1075 aa23.38■■□□□ 1.33
GTF3C1-207ENST00000567806 BTBD19C9JJ37 291 aa23.38■■□□□ 1.33
GTF3C1-207ENST00000567806 PPATQ06203 517 aa23.38■■□□□ 1.33
GTF3C1-207ENST00000567806 KIF22Q14807 665 aa23.38■■□□□ 1.33
GTF3C1-207ENST00000567806 ARMC5Q96C12 935 aa23.38■■□□□ 1.33
GTF3C1-207ENST00000567806 TLR2O60603 784 aa23.37■■□□□ 1.33
GTF3C1-207ENST00000567806 INPP5BP32019 993 aa23.37■■□□□ 1.33
GTF3C1-207ENST00000567806 PHKA1P46020 1223 aa23.37■■□□□ 1.33
GTF3C1-207ENST00000567806 CAP1Q01518 475 aa23.37■■□□□ 1.33
GTF3C1-207ENST00000567806 NBPF11Q86T75 865 aa23.37■■□□□ 1.33
GTF3C1-207ENST00000567806 ZGPATQ8N5A5 531 aaKnown RBP23.37■■□□□ 1.33
GTF3C1-207ENST00000567806 COPRSQ9NQ92 184 aa23.37■■□□□ 1.33
GTF3C1-207ENST00000567806 SALL1Q9NSC2 1324 aa23.36■■□□□ 1.33
GTF3C1-207ENST00000567806 RARSP54136 660 aaKnown RBP23.36■■□□□ 1.33
GTF3C1-207ENST00000567806 MEIS3Q99687 375 aa23.36■■□□□ 1.33
GTF3C1-207ENST00000567806 TMEM106CQ9BVX2 250 aa23.36■■□□□ 1.33
GTF3C1-207ENST00000567806 ZNF112Q9UJU3 913 aa23.36■■□□□ 1.33
GTF3C1-207ENST00000567806 GNAI3P08754 354 aa23.35■■□□□ 1.33
GTF3C1-207ENST00000567806 NFIAQ12857 509 aa23.35■■□□□ 1.33
GTF3C1-207ENST00000567806 CCDC102BQ68D86 513 aa23.35■■□□□ 1.33
GTF3C1-207ENST00000567806 ARHGAP45Q92619 1136 aa23.35■■□□□ 1.33
GTF3C1-207ENST00000567806 TIMM10P62072 90 aa23.34■■□□□ 1.33
GTF3C1-207ENST00000567806 SLC9C1Q4G0N8 1177 aa23.34■■□□□ 1.33
GTF3C1-207ENST00000567806 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.34■■□□□ 1.33
GTF3C1-207ENST00000567806 FAM198AQ9UFP1 575 aa23.34■■□□□ 1.33
GTF3C1-207ENST00000567806 AKAP2Q9Y2D5 859 aa23.34■■□□□ 1.33
GTF3C1-207ENST00000567806 PTCH2Q9Y6C5 1203 aa23.34■■□□□ 1.33
GTF3C1-207ENST00000567806 CCER2I3L3R5 266 aa23.33■■□□□ 1.33
GTF3C1-207ENST00000567806 ADORA1P30542 326 aa23.33■■□□□ 1.33
GTF3C1-207ENST00000567806 SLF2Q8IX21 1173 aa23.33■■□□□ 1.33
GTF3C1-207ENST00000567806 ZBTB22O15209 634 aa23.32■■□□□ 1.32
GTF3C1-207ENST00000567806 SRGAP3O43295 1099 aa23.32■■□□□ 1.32
GTF3C1-207ENST00000567806 EN2P19622 333 aaPredicted RBP23.32■■□□□ 1.32
GTF3C1-207ENST00000567806 LACTBP83111 547 aaPredicted RBP23.32■■□□□ 1.32
GTF3C1-207ENST00000567806 SPTY2D1Q68D10 685 aaPredicted RBP23.32■■□□□ 1.32
GTF3C1-207ENST00000567806 DZIP1Q86YF9 867 aaKnown RBP23.32■■□□□ 1.32
GTF3C1-207ENST00000567806 ABCF2Q9UG63 623 aa23.32■■□□□ 1.32
GTF3C1-207ENST00000567806 IPO8O15397 1037 aaKnown RBP23.31■■□□□ 1.32
GTF3C1-207ENST00000567806 GNRH1P01148 92 aa23.31■■□□□ 1.32
GTF3C1-207ENST00000567806 ANKRD23Q86SG2 305 aa23.31■■□□□ 1.32
GTF3C1-207ENST00000567806 ZFPM1Q8IX07 1006 aa23.31■■□□□ 1.32
GTF3C1-207ENST00000567806 ZNF333Q96JL9 665 aa23.31■■□□□ 1.32
GTF3C1-207ENST00000567806 PDHXO00330 501 aa23.3■■□□□ 1.32
GTF3C1-207ENST00000567806 ENTPD3O75355 529 aa23.3■■□□□ 1.32
GTF3C1-207ENST00000567806 RGS3P49796 1198 aa23.3■■□□□ 1.32
GTF3C1-207ENST00000567806 SLC4A8Q2Y0W8 1093 aa23.3■■□□□ 1.32
GTF3C1-207ENST00000567806 NOL9Q5SY16 702 aaKnown RBP23.3■■□□□ 1.32
GTF3C1-207ENST00000567806 ZSCAN29Q8IWY8 852 aaPredicted RBP23.3■■□□□ 1.32
GTF3C1-207ENST00000567806 ARHGAP39Q9C0H5 1083 aa23.3■■□□□ 1.32
GTF3C1-207ENST00000567806 KCNH4Q9UQ05 1017 aa23.3■■□□□ 1.32
GTF3C1-207ENST00000567806 HTTP42858 3142 aa23.3■■□□□ 1.32
GTF3C1-207ENST00000567806 MYH13Q9UKX3 1938 aa23.29■■□□□ 1.32
GTF3C1-207ENST00000567806 A0A1B0GUL7 405 aa23.29■■□□□ 1.32
GTF3C1-207ENST00000567806 PRMT2P55345 433 aa23.29■■□□□ 1.32
GTF3C1-207ENST00000567806 TFCP2Q12800 502 aa23.29■■□□□ 1.32
GTF3C1-207ENST00000567806 RASGRF1Q13972 1273 aa23.29■■□□□ 1.32
GTF3C1-207ENST00000567806 MVPQ14764 893 aaKnown RBP23.29■■□□□ 1.32
GTF3C1-207ENST00000567806 C17orf99Q6UX52 265 aa23.29■■□□□ 1.32
GTF3C1-207ENST00000567806 XAGE2Q96GT9 111 aa23.29■■□□□ 1.32
GTF3C1-207ENST00000567806 NEUROD6Q96NK8 337 aa23.29■■□□□ 1.32
GTF3C1-207ENST00000567806 IDI2Q9BXS1 227 aa23.29■■□□□ 1.32
GTF3C1-207ENST00000567806 CPA4Q9UI42 421 aa23.29■■□□□ 1.32
GTF3C1-207ENST00000567806 CXCL11O14625 94 aa23.28■■□□□ 1.32
GTF3C1-207ENST00000567806 GCC1Q96CN9 775 aa23.28■■□□□ 1.32
GTF3C1-207ENST00000567806 FAM163AQ96GL9 167 aaPredicted RBP23.28■■□□□ 1.32
GTF3C1-207ENST00000567806 PICK1Q9NRD5 415 aa23.28■■□□□ 1.32
GTF3C1-207ENST00000567806 GAKO14976 1311 aa23.28■■□□□ 1.32
GTF3C1-207ENST00000567806 PDS5AQ29RF7 1337 aaKnown RBP23.28■■□□□ 1.32
GTF3C1-207ENST00000567806 AK9Q5TCS8 1911 aa23.27■■□□□ 1.32
GTF3C1-207ENST00000567806 ECM2O94769 699 aaPredicted RBP23.27■■□□□ 1.32
GTF3C1-207ENST00000567806 MTX1Q13505 466 aa23.27■■□□□ 1.32
GTF3C1-207ENST00000567806 GORABQ5T7V8 394 aa23.27■■□□□ 1.32
GTF3C1-207ENST00000567806 ERICH6Q7L0X2 663 aa23.27■■□□□ 1.32
GTF3C1-207ENST00000567806 MYCP01106 439 aaPredicted RBP23.26■■□□□ 1.31
GTF3C1-207ENST00000567806 HOXD10P28358 340 aa23.26■■□□□ 1.31
GTF3C1-207ENST00000567806 PSMC4P43686 418 aa23.26■■□□□ 1.31
GTF3C1-207ENST00000567806 PCDH10Q9P2E7 1040 aa23.26■■□□□ 1.31
GTF3C1-207ENST00000567806 PHF20L1A8MW92 1017 aa23.25■■□□□ 1.31
GTF3C1-207ENST00000567806 FMNL1O95466 1100 aaPredicted RBP23.25■■□□□ 1.31
GTF3C1-207ENST00000567806 GNAI2P04899 355 aa23.25■■□□□ 1.31
GTF3C1-207ENST00000567806 BTDP43251 543 aa23.25■■□□□ 1.31
GTF3C1-207ENST00000567806 SCYL3Q8IZE3 742 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms