RNA–Protein interactions for RNA: ENST00000567400.1

GINS3-207, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-207ENST00000567400 ANKRD13AQ8IZ07 590 aa9.31□□□□□ -0.92
GINS3-207ENST00000567400 SLC10A4Q96EP9 437 aa9.31□□□□□ -0.92
GINS3-207ENST00000567400 CFHR5Q9BXR6 569 aa9.31□□□□□ -0.92
GINS3-207ENST00000567400 HMG20BQ9P0W2 317 aa9.31□□□□□ -0.92
GINS3-207ENST00000567400 FAM198AQ9UFP1 575 aa9.31□□□□□ -0.92
GINS3-207ENST00000567400 AKAP2Q9Y2D5 859 aa9.31□□□□□ -0.92
GINS3-207ENST00000567400 ATRNL1Q5VV63 1379 aa9.31□□□□□ -0.92
GINS3-207ENST00000567400 ARID4AP29374 1257 aaPredicted RBP9.3□□□□□ -0.92
GINS3-207ENST00000567400 TNNI2P48788 182 aa9.3□□□□□ -0.92
GINS3-207ENST00000567400 SREBF2Q12772 1141 aa9.3□□□□□ -0.92
GINS3-207ENST00000567400 MVPQ14764 893 aaKnown RBP9.3□□□□□ -0.92
GINS3-207ENST00000567400 CEP85Q6P2H3 762 aa9.3□□□□□ -0.92
GINS3-207ENST00000567400 IFNL1Q8IU54 200 aa9.3□□□□□ -0.92
GINS3-207ENST00000567400 ZFPM1Q8IX07 1006 aa9.3□□□□□ -0.92
GINS3-207ENST00000567400 ZNF296Q8WUU4 475 aaPredicted RBP9.3□□□□□ -0.92
GINS3-207ENST00000567400 OPTNQ96CV9 577 aa9.3□□□□□ -0.92
GINS3-207ENST00000567400 MS4A4AQ96JQ5 239 aa9.3□□□□□ -0.92
GINS3-207ENST00000567400 NEUROD6Q96NK8 337 aa9.3□□□□□ -0.92
GINS3-207ENST00000567400 PTPN18Q99952 460 aa9.3□□□□□ -0.92
GINS3-207ENST00000567400 ELP3Q9H9T3 547 aa9.3□□□□□ -0.92
GINS3-207ENST00000567400 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.3□□□□□ -0.92
GINS3-207ENST00000567400 NOP58Q9Y2X3 529 aaKnown RBP9.3□□□□□ -0.92
GINS3-207ENST00000567400 SNCAIPQ9Y6H5 919 aa9.3□□□□□ -0.92
GINS3-207ENST00000567400 BRCA2P51587 3418 aa9.3□□□□□ -0.92
GINS3-207ENST00000567400 DOCK2Q92608 1830 aa9.29□□□□□ -0.92
GINS3-207ENST00000567400 TESPA1A2RU30 521 aaPredicted RBP9.29□□□□□ -0.92
GINS3-207ENST00000567400 MANSC4A6NHS7 340 aaPredicted RBP9.29□□□□□ -0.92
GINS3-207ENST00000567400 WDHD1O75717 1129 aaPredicted RBP9.29□□□□□ -0.92
GINS3-207ENST00000567400 MECOMQ03112 1051 aa9.29□□□□□ -0.92
GINS3-207ENST00000567400 TCP10Q12799 353 aa9.29□□□□□ -0.92
GINS3-207ENST00000567400 G3BP1Q13283 466 aaKnown RBP eCLIP9.29□□□□□ -0.92
GINS3-207ENST00000567400 DGKZQ13574 1117 aa9.29□□□□□ -0.92
GINS3-207ENST00000567400 TNNI3KQ59H18 835 aa9.29□□□□□ -0.92
GINS3-207ENST00000567400 NOM1Q5C9Z4 860 aaKnown RBP9.29□□□□□ -0.92
GINS3-207ENST00000567400 TBC1D9Q6ZT07 1266 aa9.29□□□□□ -0.92
GINS3-207ENST00000567400 SPATA5Q8NB90 893 aa9.29□□□□□ -0.92
GINS3-207ENST00000567400 FAM151AQ8WW52 585 aa9.29□□□□□ -0.92
GINS3-207ENST00000567400 FAM163AQ96GL9 167 aaPredicted RBP9.29□□□□□ -0.92
GINS3-207ENST00000567400 WRNIP1Q96S55 665 aa9.29□□□□□ -0.92
GINS3-207ENST00000567400 DBNDD2Q9BQY9 259 aa9.29□□□□□ -0.92
GINS3-207ENST00000567400 DDX4Q9NQI0 724 aaKnown RBP9.29□□□□□ -0.92
GINS3-207ENST00000567400 TLR7Q9NYK1 1049 aaKnown RBP9.29□□□□□ -0.92
GINS3-207ENST00000567400 TMOD2Q9NZR1 351 aa9.29□□□□□ -0.92
GINS3-207ENST00000567400 ABCF2Q9UG63 623 aa9.29□□□□□ -0.92
GINS3-207ENST00000567400 FPGT-TNNI3KV9GXZ4 949 aa9.29□□□□□ -0.92
GINS3-207ENST00000567400 MAST2Q6P0Q8 1798 aa9.29□□□□□ -0.92
GINS3-207ENST00000567400 MROH7-TTC4A0A0A0MT08 1334 aa9.29□□□□□ -0.92
GINS3-207ENST00000567400 TNRC18O15417 2968 aaPredicted RBP9.28□□□□□ -0.92
GINS3-207ENST00000567400 MYO5AQ9Y4I1 1855 aaKnown RBP9.28□□□□□ -0.92
GINS3-207ENST00000567400 GPR25O00155 361 aa9.28□□□□□ -0.92
GINS3-207ENST00000567400 SURF6O75683 361 aaKnown RBP9.28□□□□□ -0.92
GINS3-207ENST00000567400 SLURP2P0DP57 97 aa9.28□□□□□ -0.92
GINS3-207ENST00000567400 INPP5BP32019 993 aa9.28□□□□□ -0.92
GINS3-207ENST00000567400 RHBDL3P58872 404 aa9.28□□□□□ -0.92
GINS3-207ENST00000567400 MAP3K9P80192 1104 aa9.28□□□□□ -0.92
GINS3-207ENST00000567400 CAP1Q01518 475 aa9.28□□□□□ -0.92
GINS3-207ENST00000567400 MIGA2Q7L4E1 593 aa9.28□□□□□ -0.92
GINS3-207ENST00000567400 SH3BP5LQ7L8J4 393 aa9.28□□□□□ -0.92
GINS3-207ENST00000567400 DZIP1Q86YF9 867 aaKnown RBP9.28□□□□□ -0.92
GINS3-207ENST00000567400 ZGPATQ8N5A5 531 aaKnown RBP9.28□□□□□ -0.92
GINS3-207ENST00000567400 ZKSCAN4Q969J2 545 aaPredicted RBP9.28□□□□□ -0.92
GINS3-207ENST00000567400 IDI2Q9BXS1 227 aa9.28□□□□□ -0.92
GINS3-207ENST00000567400 GPR108Q9NPR9 543 aa9.28□□□□□ -0.92
GINS3-207ENST00000567400 USP40Q9NVE5 1235 aa9.28□□□□□ -0.92
GINS3-207ENST00000567400 DBNLQ9UJU6 430 aaKnown RBP9.28□□□□□ -0.92
GINS3-207ENST00000567400 GPR75-ASB3A0A0A6YYF3 556 aa9.27□□□□□ -0.93
GINS3-207ENST00000567400 SPDYE5A6NIY4 337 aa9.27□□□□□ -0.93
GINS3-207ENST00000567400 BTDP43251 543 aa9.27□□□□□ -0.93
GINS3-207ENST00000567400 RGS3P49796 1198 aa9.27□□□□□ -0.93
GINS3-207ENST00000567400 INHBEP58166 350 aa9.27□□□□□ -0.93
GINS3-207ENST00000567400 C20orf194Q5TEA3 1177 aa9.27□□□□□ -0.93
GINS3-207ENST00000567400 CTU1Q7Z7A3 348 aaKnown RBP9.27□□□□□ -0.93
GINS3-207ENST00000567400 SIRT2Q8IXJ6 389 aa9.27□□□□□ -0.93
GINS3-207ENST00000567400 BRI3BPQ8WY22 251 aa9.27□□□□□ -0.93
GINS3-207ENST00000567400 NSUN4Q96CB9 384 aaKnown RBP9.27□□□□□ -0.93
GINS3-207ENST00000567400 EAF2Q96CJ1 260 aaPredicted RBP9.27□□□□□ -0.93
GINS3-207ENST00000567400 OTUD5Q96G74 571 aa9.27□□□□□ -0.93
GINS3-207ENST00000567400 SNRKQ9NRH2 765 aa9.27□□□□□ -0.93
GINS3-207ENST00000567400 ZBTB40Q9NUA8 1239 aa9.27□□□□□ -0.93
GINS3-207ENST00000567400 ZNF112Q9UJU3 913 aa9.27□□□□□ -0.93
GINS3-207ENST00000567400 RCAN3Q9UKA8 241 aa9.27□□□□□ -0.93
GINS3-207ENST00000567400 COG6Q9Y2V7 657 aa9.27□□□□□ -0.93
GINS3-207ENST00000567400 DDTLA6NHG4 134 aaPredicted RBP9.26□□□□□ -0.93
GINS3-207ENST00000567400 CCDC85CA6NKD9 419 aa9.26□□□□□ -0.93
GINS3-207ENST00000567400 PHF20L1A8MW92 1017 aa9.26□□□□□ -0.93
GINS3-207ENST00000567400 IRF6O14896 467 aa9.26□□□□□ -0.93
GINS3-207ENST00000567400 ALDH1A1P00352 501 aa9.26□□□□□ -0.93
GINS3-207ENST00000567400 CYP2E1P05181 493 aaPredicted RBP9.26□□□□□ -0.93
GINS3-207ENST00000567400 CRHR2Q13324 411 aa9.26□□□□□ -0.93
GINS3-207ENST00000567400 OS9Q13438 667 aaPredicted RBP9.26□□□□□ -0.93
GINS3-207ENST00000567400 GORABQ5T7V8 394 aa9.26□□□□□ -0.93
GINS3-207ENST00000567400 SPTY2D1Q68D10 685 aaPredicted RBP9.26□□□□□ -0.93
GINS3-207ENST00000567400 ERICH6Q7L0X2 663 aa9.26□□□□□ -0.93
GINS3-207ENST00000567400 ADGRA1Q86SQ6 560 aa9.26□□□□□ -0.93
GINS3-207ENST00000567400 FAM43AQ8N2R8 423 aa9.26□□□□□ -0.93
GINS3-207ENST00000567400 EXOC6BQ9Y2D4 811 aa9.26□□□□□ -0.93
GINS3-207ENST00000567400 CSADQ9Y600 493 aa9.26□□□□□ -0.93
GINS3-207ENST00000567400 SIPA1L1O43166 1804 aa9.26□□□□□ -0.93
GINS3-207ENST00000567400 CDK5RAP2Q96SN8 1893 aa9.25□□□□□ -0.93
GINS3-207ENST00000567400 MKI67P46013 3256 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms