RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 PARK7Q99497 189 aaKnown RBP21.38■■□□□ 1.01
CDH3-205ENST00000566808 UNC93B1Q9H1C4 597 aa21.38■■□□□ 1.01
CDH3-205ENST00000566808 GYG1P46976 350 aa21.37■■□□□ 1.01
CDH3-205ENST00000566808 CCDC57Q2TAC2 916 aa21.37■■□□□ 1.01
CDH3-205ENST00000566808 TEKT1Q969V4 418 aa21.37■■□□□ 1.01
CDH3-205ENST00000566808 KCNH4Q9UQ05 1017 aa21.37■■□□□ 1.01
CDH3-205ENST00000566808 AK9Q5TCS8 1911 aa21.37■■□□□ 1.01
CDH3-205ENST00000566808 MYH13Q9UKX3 1938 aa21.36■■□□□ 1.01
CDH3-205ENST00000566808 TWISTNBQ3B726 338 aaPredicted RBP21.36■■□□□ 1.01
CDH3-205ENST00000566808 TBC1D22AQ8WUA7 517 aa21.36■■□□□ 1.01
CDH3-205ENST00000566808 TSR2Q969E8 191 aaKnown RBP21.36■■□□□ 1.01
CDH3-205ENST00000566808 ZNF341Q9BYN7 854 aa21.36■■□□□ 1.01
CDH3-205ENST00000566808 STAP2Q9UGK3 403 aa21.36■■□□□ 1.01
CDH3-205ENST00000566808 BCRP11274 1271 aa21.35■■□□□ 1.01
CDH3-205ENST00000566808 ZNF594Q96JF6 807 aaPredicted RBP21.35■■□□□ 1.01
CDH3-205ENST00000566808 FAM84BQ96KN1 310 aaPredicted RBP21.35■■□□□ 1.01
CDH3-205ENST00000566808 PTPRFP10586 1907 aa21.34■■□□□ 1.01
CDH3-205ENST00000566808 GRIK5Q16478 980 aa21.34■■□□□ 1.01
CDH3-205ENST00000566808 LMBR1LQ6UX01 489 aa21.34■■□□□ 1.01
CDH3-205ENST00000566808 ZDHHC15Q96MV8 337 aa21.34■■□□□ 1.01
CDH3-205ENST00000566808 STXBP5LQ9Y2K9 1186 aa21.34■■□□□ 1.01
CDH3-205ENST00000566808 MAST3O60307 1309 aa21.33■■□□□ 1.01
CDH3-205ENST00000566808 ADCY3O60266 1144 aa21.33■■□□□ 1.01
CDH3-205ENST00000566808 INPP5BP32019 993 aa21.33■■□□□ 1.01
CDH3-205ENST00000566808 BMP8BP34820 402 aa21.33■■□□□ 1.01
CDH3-205ENST00000566808 MOGSQ13724 837 aa21.33■■□□□ 1.01
CDH3-205ENST00000566808 DEFB123Q8N688 67 aa21.33■■□□□ 1.01
CDH3-205ENST00000566808 DOCK2Q92608 1830 aa21.32■■□□□ 1
CDH3-205ENST00000566808 INHAP05111 366 aa21.32■■□□□ 1
CDH3-205ENST00000566808 GDF15Q99988 308 aa21.32■■□□□ 1
CDH3-205ENST00000566808 GABRQQ9UN88 632 aa21.32■■□□□ 1
CDH3-205ENST00000566808 TFRCP02786 760 aaKnown RBP21.31■■□□□ 1
CDH3-205ENST00000566808 VPS37DQ86XT2 251 aa21.31■■□□□ 1
CDH3-205ENST00000566808 PXYLP1Q8TE99 480 aa21.31■■□□□ 1
CDH3-205ENST00000566808 DEFB118Q96PH6 123 aa21.31■■□□□ 1
CDH3-205ENST00000566808 PAK6Q9NQU5 681 aaPredicted RBP21.31■■□□□ 1
CDH3-205ENST00000566808 DOCK3Q8IZD9 2030 aa21.3■■□□□ 1
CDH3-205ENST00000566808 CHAF1AQ13111 956 aaPredicted RBP21.3■■□□□ 1
CDH3-205ENST00000566808 EPHA10Q5JZY3 1008 aa21.3■■□□□ 1
CDH3-205ENST00000566808 NOL9Q5SY16 702 aaKnown RBP21.3■■□□□ 1
CDH3-205ENST00000566808 APOBEC3HQ6NTF7 200 aaKnown RBP21.3■■□□□ 1
CDH3-205ENST00000566808 MRIQ9BWK5 157 aa21.3■■□□□ 1
CDH3-205ENST00000566808 ZNF112Q9UJU3 913 aa21.3■■□□□ 1
CDH3-205ENST00000566808 CYP2C8P10632 490 aa21.29■■□□□ 1
CDH3-205ENST00000566808 ELNP15502 786 aa21.29■■□□□ 1
CDH3-205ENST00000566808 FLT3LGP49771 235 aa21.29■■□□□ 1
CDH3-205ENST00000566808 IRF5Q13568 498 aa21.29■■□□□ 1
CDH3-205ENST00000566808 MIGA2Q7L4E1 593 aa21.29■■□□□ 1
CDH3-205ENST00000566808 CRISPLD2Q9H0B8 497 aa21.29■■□□□ 1
CDH3-205ENST00000566808 IQSEC3Q9UPP2 1182 aaPredicted RBP21.29■■□□□ 1
CDH3-205ENST00000566808 SUGT1Q9Y2Z0 365 aa21.29■■□□□ 1
CDH3-205ENST00000566808 LAMA2P24043 3122 aaKnown RBP21.29■■□□□ 1
CDH3-205ENST00000566808 VCANP13611 3396 aa21.29■■□□□ 1
CDH3-205ENST00000566808 FRAT2O75474 233 aaPredicted RBP21.28■■□□□ 1
CDH3-205ENST00000566808 LRIT3Q3SXY7 679 aa21.28■■□□□ 1
CDH3-205ENST00000566808 NECAB2Q7Z6G3 386 aa21.28■■□□□ 1
CDH3-205ENST00000566808 FBXO33Q7Z6M2 555 aa21.28■■□□□ 1
CDH3-205ENST00000566808 PAWRQ96IZ0 340 aaKnown RBP21.28■■□□□ 1
CDH3-205ENST00000566808 DDX60LQ5H9U9 1706 aaKnown RBP21.28■■□□□ 1
CDH3-205ENST00000566808 MROH5Q6ZUA9 1318 aa21.28■■□□□ 1
CDH3-205ENST00000566808 GRM8O00222 908 aa21.27■■□□□ 1
CDH3-205ENST00000566808 CXCL11O14625 94 aa21.27■■□□□ 1
CDH3-205ENST00000566808 TNPO2O14787 897 aaKnown RBP21.27■■□□□ 1
CDH3-205ENST00000566808 BEND3Q5T5X7 828 aa21.27■■□□□ 1
CDH3-205ENST00000566808 GPAT2Q6NUI2 795 aa21.27■■□□□ 1
CDH3-205ENST00000566808 Q7L0L9 218 aa21.27■■□□□ 1
CDH3-205ENST00000566808 FAM151AQ8WW52 585 aa21.27■■□□□ 1
CDH3-205ENST00000566808 DOCK1Q14185 1865 aa21.26■□□□□ 0.99
CDH3-205ENST00000566808 CAVIN4Q5BKX8 364 aa21.26■□□□□ 0.99
CDH3-205ENST00000566808 HHIPL2Q6UWX4 724 aa21.26■□□□□ 0.99
CDH3-205ENST00000566808 C7orf61Q8IZ16 206 aa21.26■□□□□ 0.99
CDH3-205ENST00000566808 ANKLE1Q8NAG6 615 aa21.26■□□□□ 0.99
CDH3-205ENST00000566808 MTMR10Q9NXD2 777 aa21.26■□□□□ 0.99
CDH3-205ENST00000566808 COL25A1Q9BXS0 654 aaPredicted RBP21.25■□□□□ 0.99
CDH3-205ENST00000566808 PHIPQ8WWQ0 1821 aa21.25■□□□□ 0.99
CDH3-205ENST00000566808 FASTKD5Q7L8L6 764 aaKnown RBP21.24■□□□□ 0.99
CDH3-205ENST00000566808 TDHQ8IZJ6 230 aa21.24■□□□□ 0.99
CDH3-205ENST00000566808 DIS3LQ8TF46 1054 aaKnown RBP21.24■□□□□ 0.99
CDH3-205ENST00000566808 PUS3Q9BZE2 481 aaKnown RBP21.24■□□□□ 0.99
CDH3-205ENST00000566808 SLC45A1Q9Y2W3 748 aa21.24■□□□□ 0.99
CDH3-205ENST00000566808 A0A0G2JLL6 359 aaPredicted RBP21.23■□□□□ 0.99
CDH3-205ENST00000566808 F6X3S4 739 aa21.23■□□□□ 0.99
CDH3-205ENST00000566808 BCAMP50895 628 aa21.23■□□□□ 0.99
CDH3-205ENST00000566808 PRRT2Q7Z6L0 340 aaPredicted RBP21.23■□□□□ 0.99
CDH3-205ENST00000566808 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.23■□□□□ 0.99
CDH3-205ENST00000566808 ZMYND8Q9ULU4 1186 aaPredicted RBP21.23■□□□□ 0.99
CDH3-205ENST00000566808 CCDC27Q2M243 656 aa21.22■□□□□ 0.99
CDH3-205ENST00000566808 IL16Q14005 1332 aa21.22■□□□□ 0.99
CDH3-205ENST00000566808 KIF16BQ96L93 1317 aa21.22■□□□□ 0.99
CDH3-205ENST00000566808 TTC28Q96AY4 2481 aa21.21■□□□□ 0.99
CDH3-205ENST00000566808 SMCR8Q8TEV9 937 aaPredicted RBP21.21■□□□□ 0.99
CDH3-205ENST00000566808 C9orf78Q9NZ63 289 aaPredicted RBP21.21■□□□□ 0.99
CDH3-205ENST00000566808 TAOK2Q9UL54 1235 aa21.21■□□□□ 0.99
CDH3-205ENST00000566808 EYSQ5T1H1 3165 aa21.21■□□□□ 0.99
CDH3-205ENST00000566808 MAGEA10P43363 369 aaPredicted RBP21.2■□□□□ 0.98
CDH3-205ENST00000566808 TCP10Q12799 353 aa21.2■□□□□ 0.98
CDH3-205ENST00000566808 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.2■□□□□ 0.98
CDH3-205ENST00000566808 COA7Q96BR5 231 aa21.2■□□□□ 0.98
CDH3-205ENST00000566808 PICK1Q9NRD5 415 aa21.2■□□□□ 0.98
CDH3-205ENST00000566808 SPTBN5Q9NRC6 3674 aaKnown RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms