RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 CD99L2Q8TCZ2 262 aa18.65■□□□□ 0.58
RNF40-209ENST00000566703 OTUD5Q96G74 571 aa18.65■□□□□ 0.58
RNF40-209ENST00000566703 WRNIP1Q96S55 665 aa18.65■□□□□ 0.58
RNF40-209ENST00000566703 ZNF341Q9BYN7 854 aa18.65■□□□□ 0.58
RNF40-209ENST00000566703 PTPN22Q9Y2R2 807 aa18.65■□□□□ 0.58
RNF40-209ENST00000566703 SNCAIPQ9Y6H5 919 aa18.65■□□□□ 0.58
RNF40-209ENST00000566703 TAF1CQ15572 869 aaPredicted RBP18.64■□□□□ 0.57
RNF40-209ENST00000566703 ZGPATQ8N5A5 531 aaKnown RBP18.64■□□□□ 0.57
RNF40-209ENST00000566703 DAGLAQ9Y4D2 1042 aa18.64■□□□□ 0.57
RNF40-209ENST00000566703 PPIL2Q13356 520 aa18.63■□□□□ 0.57
RNF40-209ENST00000566703 SNAPC2Q13487 334 aa18.63■□□□□ 0.57
RNF40-209ENST00000566703 CDC42EP5Q6NZY7 148 aa18.63■□□□□ 0.57
RNF40-209ENST00000566703 MEIS3Q99687 375 aa18.63■□□□□ 0.57
RNF40-209ENST00000566703 ZNF112Q9UJU3 913 aa18.63■□□□□ 0.57
RNF40-209ENST00000566703 IPO8O15397 1037 aaKnown RBP18.62■□□□□ 0.57
RNF40-209ENST00000566703 PRDX5P30044 214 aa18.62■□□□□ 0.57
RNF40-209ENST00000566703 PHKA1P46020 1223 aa18.62■□□□□ 0.57
RNF40-209ENST00000566703 PPATQ06203 517 aa18.62■□□□□ 0.57
RNF40-209ENST00000566703 MTX1Q13505 466 aa18.62■□□□□ 0.57
RNF40-209ENST00000566703 FAM43AQ8N2R8 423 aa18.62■□□□□ 0.57
RNF40-209ENST00000566703 ZKSCAN4Q969J2 545 aaPredicted RBP18.62■□□□□ 0.57
RNF40-209ENST00000566703 PA2G4Q9UQ80 394 aaKnown RBP18.62■□□□□ 0.57
RNF40-209ENST00000566703 IRF6O14896 467 aa18.61■□□□□ 0.57
RNF40-209ENST00000566703 DIXDC1Q155Q3 683 aa18.61■□□□□ 0.57
RNF40-209ENST00000566703 CCDC102BQ68D86 513 aa18.61■□□□□ 0.57
RNF40-209ENST00000566703 ARMC5Q96C12 935 aa18.61■□□□□ 0.57
RNF40-209ENST00000566703 USP40Q9NVE5 1235 aa18.61■□□□□ 0.57
RNF40-209ENST00000566703 AKAP2Q9Y2D5 859 aa18.61■□□□□ 0.57
RNF40-209ENST00000566703 PDS5AQ29RF7 1337 aaKnown RBP18.6■□□□□ 0.57
RNF40-209ENST00000566703 TLR2O60603 784 aa18.6■□□□□ 0.57
RNF40-209ENST00000566703 TCP10Q12799 353 aa18.6■□□□□ 0.57
RNF40-209ENST00000566703 PRPF38BQ5VTL8 546 aaKnown RBP18.6■□□□□ 0.57
RNF40-209ENST00000566703 MIGA2Q7L4E1 593 aa18.6■□□□□ 0.57
RNF40-209ENST00000566703 SLF2Q8IX21 1173 aa18.6■□□□□ 0.57
RNF40-209ENST00000566703 FAM163AQ96GL9 167 aaPredicted RBP18.6■□□□□ 0.57
RNF40-209ENST00000566703 OTOFQ9HC10 1997 aa18.59■□□□□ 0.57
RNF40-209ENST00000566703 BTBD19C9JJ37 291 aa18.59■□□□□ 0.57
RNF40-209ENST00000566703 TIMM10P62072 90 aa18.59■□□□□ 0.57
RNF40-209ENST00000566703 SPTY2D1Q68D10 685 aaPredicted RBP18.59■□□□□ 0.57
RNF40-209ENST00000566703 IDI2Q9BXS1 227 aa18.59■□□□□ 0.57
RNF40-209ENST00000566703 FAM198AQ9UFP1 575 aa18.59■□□□□ 0.57
RNF40-209ENST00000566703 SRGAP3O43295 1099 aa18.58■□□□□ 0.56
RNF40-209ENST00000566703 ENTPD3O75355 529 aa18.58■□□□□ 0.56
RNF40-209ENST00000566703 INPP5BP32019 993 aa18.58■□□□□ 0.56
RNF40-209ENST00000566703 NFIAQ12857 509 aa18.58■□□□□ 0.56
RNF40-209ENST00000566703 NOL9Q5SY16 702 aaKnown RBP18.58■□□□□ 0.56
RNF40-209ENST00000566703 GAKO14976 1311 aa18.57■□□□□ 0.56
RNF40-209ENST00000566703 GNRH1P01148 92 aa18.57■□□□□ 0.56
RNF40-209ENST00000566703 ADORA1P30542 326 aa18.57■□□□□ 0.56
RNF40-209ENST00000566703 CAP1Q01518 475 aa18.57■□□□□ 0.56
RNF40-209ENST00000566703 MVPQ14764 893 aaKnown RBP18.57■□□□□ 0.56
RNF40-209ENST00000566703 KIF22Q14807 665 aa18.57■□□□□ 0.56
RNF40-209ENST00000566703 ANKRD23Q86SG2 305 aa18.57■□□□□ 0.56
RNF40-209ENST00000566703 NBPF11Q86T75 865 aa18.57■□□□□ 0.56
RNF40-209ENST00000566703 XAGE2Q96GT9 111 aa18.57■□□□□ 0.56
RNF40-209ENST00000566703 KCNH4Q9UQ05 1017 aa18.57■□□□□ 0.56
RNF40-209ENST00000566703 A0A1B0GUL7 405 aa18.56■□□□□ 0.56
RNF40-209ENST00000566703 PRMT2P55345 433 aa18.56■□□□□ 0.56
RNF40-209ENST00000566703 RASGRF1Q13972 1273 aa18.56■□□□□ 0.56
RNF40-209ENST00000566703 ATF7IPQ6VMQ6 1270 aa18.56■□□□□ 0.56
RNF40-209ENST00000566703 CXCL11O14625 94 aa18.55■□□□□ 0.56
RNF40-209ENST00000566703 GNAI2P04899 355 aa18.55■□□□□ 0.56
RNF40-209ENST00000566703 MAP3K10Q02779 954 aa18.55■□□□□ 0.56
RNF40-209ENST00000566703 TFCP2Q12800 502 aa18.55■□□□□ 0.56
RNF40-209ENST00000566703 DZIP1Q86YF9 867 aaKnown RBP18.55■□□□□ 0.56
RNF40-209ENST00000566703 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.55■□□□□ 0.56
RNF40-209ENST00000566703 ABCF2Q9UG63 623 aa18.55■□□□□ 0.56
RNF40-209ENST00000566703 POTEFA5A3E0 1075 aa18.54■□□□□ 0.56
RNF40-209ENST00000566703 TRIM27P14373 513 aa18.54■□□□□ 0.56
RNF40-209ENST00000566703 LACTBP83111 547 aaPredicted RBP18.54■□□□□ 0.56
RNF40-209ENST00000566703 C17orf99Q6UX52 265 aa18.54■□□□□ 0.56
RNF40-209ENST00000566703 ZFPM1Q8IX07 1006 aa18.54■□□□□ 0.56
RNF40-209ENST00000566703 TMEM106CQ9BVX2 250 aa18.54■□□□□ 0.56
RNF40-209ENST00000566703 PHF20L1A8MW92 1017 aa18.53■□□□□ 0.56
RNF40-209ENST00000566703 NPM3O75607 178 aaKnown RBP18.53■□□□□ 0.56
RNF40-209ENST00000566703 MAP4K4O95819 1239 aaPredicted RBP18.53■□□□□ 0.56
RNF40-209ENST00000566703 RGS3P49796 1198 aa18.53■□□□□ 0.56
RNF40-209ENST00000566703 ERICH6Q7L0X2 663 aa18.53■□□□□ 0.56
RNF40-209ENST00000566703 ZNF333Q96JL9 665 aa18.53■□□□□ 0.56
RNF40-209ENST00000566703 PTCH2Q9Y6C5 1203 aa18.53■□□□□ 0.56
RNF40-209ENST00000566703 GPR75-ASB3A0A0A6YYF3 556 aa18.52■□□□□ 0.56
RNF40-209ENST00000566703 PDHXO00330 501 aa18.52■□□□□ 0.56
RNF40-209ENST00000566703 LDHCP07864 332 aa18.52■□□□□ 0.56
RNF40-209ENST00000566703 G3BP1Q13283 466 aaKnown RBP eCLIP18.52■□□□□ 0.564e-8■■□□□ 12
RNF40-209ENST00000566703 SLC9C1Q4G0N8 1177 aa18.52■□□□□ 0.56
RNF40-209ENST00000566703 NEUROD6Q96NK8 337 aa18.52■□□□□ 0.56
RNF40-209ENST00000566703 MROH7-TTC4A0A0A0MT08 1334 aa18.51■□□□□ 0.55
RNF40-209ENST00000566703 MYH13Q9UKX3 1938 aa18.51■□□□□ 0.55
RNF40-209ENST00000566703 BCAR3O75815 825 aa18.51■□□□□ 0.55
RNF40-209ENST00000566703 HOXD10P28358 340 aa18.51■□□□□ 0.55
RNF40-209ENST00000566703 GSTO1P78417 241 aa18.51■□□□□ 0.55
RNF40-209ENST00000566703 MOGSQ13724 837 aa18.51■□□□□ 0.55
RNF40-209ENST00000566703 GORABQ5T7V8 394 aa18.51■□□□□ 0.55
RNF40-209ENST00000566703 FASTKD5Q7L8L6 764 aaKnown RBP18.51■□□□□ 0.55
RNF40-209ENST00000566703 ZSCAN29Q8IWY8 852 aaPredicted RBP18.51■□□□□ 0.55
RNF40-209ENST00000566703 SCYL3Q8IZE3 742 aa18.51■□□□□ 0.55
RNF40-209ENST00000566703 FRAT1Q92837 279 aaPredicted RBP18.51■□□□□ 0.55
RNF40-209ENST00000566703 HMG20BQ9P0W2 317 aa18.51■□□□□ 0.55
RNF40-209ENST00000566703 ATRNL1Q5VV63 1379 aa18.51■□□□□ 0.55
RNF40-209ENST00000566703 PDE4DIPQ5VU43 2346 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 560.4 ms