RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 DMRTC2Q8IXT2 367 aaPredicted RBP4.47□□□□□ -1.69
HERPUD1-211ENST00000566550 RHPN1Q8TCX5 695 aa4.47□□□□□ -1.69
HERPUD1-211ENST00000566550 DNAJC7Q99615 494 aa4.47□□□□□ -1.69
HERPUD1-211ENST00000566550 TRIM56Q9BRZ2 755 aaKnown RBP4.47□□□□□ -1.69
HERPUD1-211ENST00000566550 KRTAP4-7Q9BYR0 210 aa4.47□□□□□ -1.69
HERPUD1-211ENST00000566550 PHACTR1Q9C0D0 580 aa4.47□□□□□ -1.69
HERPUD1-211ENST00000566550 IGFLR1Q9H665 355 aa4.47□□□□□ -1.69
HERPUD1-211ENST00000566550 BRD7Q9NPI1 651 aa4.47□□□□□ -1.69
HERPUD1-211ENST00000566550 ST7Q9NRC1 585 aa4.47□□□□□ -1.69
HERPUD1-211ENST00000566550 EML1O00423 815 aa4.46□□□□□ -1.7
HERPUD1-211ENST00000566550 GIPC1O14908 333 aa4.46□□□□□ -1.7
HERPUD1-211ENST00000566550 GSC2O15499 205 aa4.46□□□□□ -1.7
HERPUD1-211ENST00000566550 KLF4O43474 513 aa4.46□□□□□ -1.7
HERPUD1-211ENST00000566550 PRC1O43663 620 aa4.46□□□□□ -1.7
HERPUD1-211ENST00000566550 TAL1P17542 331 aaPredicted RBP4.46□□□□□ -1.7
HERPUD1-211ENST00000566550 EVA1CP58658 441 aa4.46□□□□□ -1.7
HERPUD1-211ENST00000566550 FAM160A1Q05DH4 1040 aa4.46□□□□□ -1.7
HERPUD1-211ENST00000566550 CCDC85BQ15834 202 aaPredicted RBP4.46□□□□□ -1.7
HERPUD1-211ENST00000566550 PCSK7Q16549 785 aa4.46□□□□□ -1.7
HERPUD1-211ENST00000566550 APBB1IPQ7Z5R6 666 aaPredicted RBP4.46□□□□□ -1.7
HERPUD1-211ENST00000566550 RELL1Q8IUW5 271 aa4.46□□□□□ -1.7
HERPUD1-211ENST00000566550 ZNF295-AS1Q8N0V1 137 aa4.46□□□□□ -1.7
HERPUD1-211ENST00000566550 LILRB2Q8N423 598 aa4.46□□□□□ -1.7
HERPUD1-211ENST00000566550 NUDT8Q8WV74 236 aa4.46□□□□□ -1.7
HERPUD1-211ENST00000566550 BHMTQ93088 406 aa4.46□□□□□ -1.7
HERPUD1-211ENST00000566550 IER2Q9BTL4 223 aa4.46□□□□□ -1.7
HERPUD1-211ENST00000566550 BCO2Q9BYV7 579 aa4.46□□□□□ -1.7
HERPUD1-211ENST00000566550 SMAD7O15105 426 aaKnown RBP4.45□□□□□ -1.7
HERPUD1-211ENST00000566550 PHACTR2O75167 634 aa4.45□□□□□ -1.7
HERPUD1-211ENST00000566550 FBXO24O75426 580 aa4.45□□□□□ -1.7
HERPUD1-211ENST00000566550 TNFRSF21O75509 655 aa4.45□□□□□ -1.7
HERPUD1-211ENST00000566550 EIF4A3P38919 411 aaKnown RBP4.45□□□□□ -1.7
HERPUD1-211ENST00000566550 KCNQ4P56696 695 aa4.45□□□□□ -1.7
HERPUD1-211ENST00000566550 HIF1AQ16665 826 aa4.45□□□□□ -1.7
HERPUD1-211ENST00000566550 PSAPL1Q6NUJ1 521 aa4.45□□□□□ -1.7
HERPUD1-211ENST00000566550 IGF2-ASQ6U949 168 aa4.45□□□□□ -1.7
HERPUD1-211ENST00000566550 ZNF438Q7Z4V0 828 aa4.45□□□□□ -1.7
HERPUD1-211ENST00000566550 RAB44Q7Z6P3 723 aaPredicted RBP4.45□□□□□ -1.7
HERPUD1-211ENST00000566550 CELF2-AS1Q8N7Q2 184 aa4.45□□□□□ -1.7
HERPUD1-211ENST00000566550 SNX29Q8TEQ0 813 aa4.45□□□□□ -1.7
HERPUD1-211ENST00000566550 ZDHHC1Q8WTX9 485 aa4.45□□□□□ -1.7
HERPUD1-211ENST00000566550 EAF1Q96JC9 268 aaPredicted RBP4.45□□□□□ -1.7
HERPUD1-211ENST00000566550 PNMA5Q96PV4 448 aa4.45□□□□□ -1.7
HERPUD1-211ENST00000566550 HOMER2Q9NSB8 354 aa4.45□□□□□ -1.7
HERPUD1-211ENST00000566550 PRKAG3Q9UGI9 489 aa4.45□□□□□ -1.7
HERPUD1-211ENST00000566550 TCEAL9Q9UHQ7 104 aa4.45□□□□□ -1.7
HERPUD1-211ENST00000566550 STRIP2Q9ULQ0 834 aa4.45□□□□□ -1.7
HERPUD1-211ENST00000566550 SLC6A14Q9UN76 642 aa4.45□□□□□ -1.7
HERPUD1-211ENST00000566550 USP20Q9Y2K6 914 aa4.45□□□□□ -1.7
HERPUD1-211ENST00000566550 CREB3O43889 395 aa4.44□□□□□ -1.7
HERPUD1-211ENST00000566550 FSTP19883 344 aa4.44□□□□□ -1.7
HERPUD1-211ENST00000566550 AFF1P51825 1210 aaKnown RBP4.44□□□□□ -1.7
HERPUD1-211ENST00000566550 RHBDL3P58872 404 aa4.44□□□□□ -1.7
HERPUD1-211ENST00000566550 BIRC2Q13490 618 aa4.44□□□□□ -1.7
HERPUD1-211ENST00000566550 SEPT6Q14141 434 aa4.44□□□□□ -1.7
HERPUD1-211ENST00000566550 FAM50AQ14320 339 aaKnown RBP4.44□□□□□ -1.7
HERPUD1-211ENST00000566550 C21orf62-AS1Q17RA5 79 aa4.44□□□□□ -1.7
HERPUD1-211ENST00000566550 TKFCQ3LXA3 575 aa4.44□□□□□ -1.7
HERPUD1-211ENST00000566550 AXDND1Q5T1B0 1012 aaPredicted RBP4.44□□□□□ -1.7
HERPUD1-211ENST00000566550 C1orf53Q5VUE5 145 aa4.44□□□□□ -1.7
HERPUD1-211ENST00000566550 FBXW10Q5XX13 1052 aa4.44□□□□□ -1.7
HERPUD1-211ENST00000566550 MSL1Q68DK7 614 aa4.44□□□□□ -1.7
HERPUD1-211ENST00000566550 FBXO11Q86XK2 927 aa4.44□□□□□ -1.7
HERPUD1-211ENST00000566550 TRPM4Q8TD43 1214 aa4.44□□□□□ -1.7
HERPUD1-211ENST00000566550 ZNF296Q8WUU4 475 aaPredicted RBP4.44□□□□□ -1.7
HERPUD1-211ENST00000566550 SRRTQ9BXP5 876 aaKnown RBP4.44□□□□□ -1.7
HERPUD1-211ENST00000566550 FAM13BQ9NYF5 915 aa4.44□□□□□ -1.7
HERPUD1-211ENST00000566550 UBP1Q9NZI7 540 aa4.44□□□□□ -1.7
HERPUD1-211ENST00000566550 BCCIPQ9P287 314 aaKnown RBP eCLIP4.44□□□□□ -1.7
HERPUD1-211ENST00000566550 LEMD3Q9Y2U8 911 aa4.44□□□□□ -1.7
HERPUD1-211ENST00000566550 RPLP1P05386 114 aaKnown RBP4.43□□□□□ -1.7
HERPUD1-211ENST00000566550 NOS3P29474 1203 aa4.43□□□□□ -1.7
HERPUD1-211ENST00000566550 GSTT1P30711 240 aa4.43□□□□□ -1.7
HERPUD1-211ENST00000566550 GRIK1P39086 918 aa4.43□□□□□ -1.7
HERPUD1-211ENST00000566550 SOX9P48436 509 aa4.43□□□□□ -1.7
HERPUD1-211ENST00000566550 MASP1P48740 699 aa4.43□□□□□ -1.7
HERPUD1-211ENST00000566550 GP2P55259 537 aaKnown RBP4.43□□□□□ -1.7
HERPUD1-211ENST00000566550 APOBRQ0VD83 1088 aa4.43□□□□□ -1.7
HERPUD1-211ENST00000566550 PWP1Q13610 501 aa4.43□□□□□ -1.7
HERPUD1-211ENST00000566550 ARSHQ5FYA8 562 aa4.43□□□□□ -1.7
HERPUD1-211ENST00000566550 SNAP47Q5SQN1 464 aa4.43□□□□□ -1.7
HERPUD1-211ENST00000566550 LARP1BQ659C4 914 aaKnown RBP4.43□□□□□ -1.7
HERPUD1-211ENST00000566550 C16orf86Q6ZW13 317 aa4.43□□□□□ -1.7
HERPUD1-211ENST00000566550 WFDC8Q8IUA0 241 aa4.43□□□□□ -1.7
HERPUD1-211ENST00000566550 SMC5Q8IY18 1101 aa4.43□□□□□ -1.7
HERPUD1-211ENST00000566550 RAVER1Q8IY67 606 aaKnown RBP4.43□□□□□ -1.7
HERPUD1-211ENST00000566550 DCAF11Q8TEB1 546 aa4.43□□□□□ -1.7
HERPUD1-211ENST00000566550 TSR2Q969E8 191 aaKnown RBP4.43□□□□□ -1.7
HERPUD1-211ENST00000566550 FEZ1Q99689 392 aa4.43□□□□□ -1.7
HERPUD1-211ENST00000566550 SRCIN1Q9C0H9 1055 aa4.43□□□□□ -1.7
HERPUD1-211ENST00000566550 TYW1Q9NV66 732 aaKnown RBP4.43□□□□□ -1.7
HERPUD1-211ENST00000566550 PFDN2Q9UHV9 154 aa4.43□□□□□ -1.7
HERPUD1-211ENST00000566550 PPT2Q9UMR5 302 aa4.43□□□□□ -1.7
HERPUD1-211ENST00000566550 MAPK8IP1Q9UQF2 711 aa4.43□□□□□ -1.7
HERPUD1-211ENST00000566550 EID1Q9Y6B2 187 aa4.43□□□□□ -1.7
HERPUD1-211ENST00000566550 EIF3JO75822 258 aaKnown RBP4.42□□□□□ -1.7
HERPUD1-211ENST00000566550 MICAL2O94851 1124 aa4.42□□□□□ -1.7
HERPUD1-211ENST00000566550 CD97P48960 835 aa4.42□□□□□ -1.7
HERPUD1-211ENST00000566550 CDKN1CP49918 316 aaPredicted RBP4.42□□□□□ -1.7
HERPUD1-211ENST00000566550 FCGRTP55899 365 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms