RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 FKBP1CQ5VVH2 108 aa23.71■■□□□ 1.39
CCDC113-204ENST00000566498 CDC42EP5Q6NZY7 148 aa23.71■■□□□ 1.39
CCDC113-204ENST00000566498 SNRKQ9NRH2 765 aa23.71■■□□□ 1.39
CCDC113-204ENST00000566498 TSKSQ9UJT2 592 aa23.71■■□□□ 1.39
CCDC113-204ENST00000566498 CA12O43570 354 aa23.7■■□□□ 1.38
CCDC113-204ENST00000566498 HSPA8P11142 646 aaKnown RBP23.7■■□□□ 1.38
CCDC113-204ENST00000566498 MCAMP43121 646 aa23.7■■□□□ 1.38
CCDC113-204ENST00000566498 FAM83AQ86UY5 434 aa23.7■■□□□ 1.38
CCDC113-204ENST00000566498 SIRT2Q8IXJ6 389 aa23.7■■□□□ 1.38
CCDC113-204ENST00000566498 EAF2Q96CJ1 260 aaPredicted RBP23.7■■□□□ 1.38
CCDC113-204ENST00000566498 TEPSINQ96N21 525 aa23.7■■□□□ 1.38
CCDC113-204ENST00000566498 CSRNP1Q96S65 589 aa23.7■■□□□ 1.38
CCDC113-204ENST00000566498 RAI14Q9P0K7 980 aa23.7■■□□□ 1.38
CCDC113-204ENST00000566498 LRP2BPQ9P2M1 347 aa23.7■■□□□ 1.38
CCDC113-204ENST00000566498 THSD7BQ9C0I4 1608 aa23.7■■□□□ 1.38
CCDC113-204ENST00000566498 MECOMQ03112 1051 aa23.69■■□□□ 1.38
CCDC113-204ENST00000566498 CDAN1Q8IWY9 1227 aa23.69■■□□□ 1.38
CCDC113-204ENST00000566498 REM2Q8IYK8 340 aaPredicted RBP23.69■■□□□ 1.38
CCDC113-204ENST00000566498 PRDM10Q9NQV6 1147 aa23.69■■□□□ 1.38
CCDC113-204ENST00000566498 TCP10Q12799 353 aa23.68■■□□□ 1.38
CCDC113-204ENST00000566498 MAP3K11Q16584 847 aa23.68■■□□□ 1.38
CCDC113-204ENST00000566498 AACSQ86V21 672 aa23.68■■□□□ 1.38
CCDC113-204ENST00000566498 IL1RAPL2Q9NP60 686 aa23.68■■□□□ 1.38
CCDC113-204ENST00000566498 DBNLQ9UJU6 430 aaKnown RBP23.68■■□□□ 1.38
CCDC113-204ENST00000566498 MYH2Q9UKX2 1941 aa23.67■■□□□ 1.38
CCDC113-204ENST00000566498 GSTO1P78417 241 aa23.67■■□□□ 1.38
CCDC113-204ENST00000566498 RHPN1Q8TCX5 695 aa23.67■■□□□ 1.38
CCDC113-204ENST00000566498 CLMNQ96JQ2 1002 aa23.67■■□□□ 1.38
CCDC113-204ENST00000566498 SSC5DA1L4H1 1573 aa23.66■■□□□ 1.38
CCDC113-204ENST00000566498 LDHCP07864 332 aa23.66■■□□□ 1.38
CCDC113-204ENST00000566498 ANKRD13AQ8IZ07 590 aa23.66■■□□□ 1.38
CCDC113-204ENST00000566498 TNS4Q8IZW8 715 aa23.66■■□□□ 1.38
CCDC113-204ENST00000566498 HOOK2Q96ED9 719 aa23.66■■□□□ 1.38
CCDC113-204ENST00000566498 KIF1BPQ96EK5 621 aa23.66■■□□□ 1.38
CCDC113-204ENST00000566498 FAM163AQ96GL9 167 aaPredicted RBP23.66■■□□□ 1.38
CCDC113-204ENST00000566498 TLR7Q9NYK1 1049 aaKnown RBP23.66■■□□□ 1.38
CCDC113-204ENST00000566498 UNCXA6NJT0 531 aa23.65■■□□□ 1.38
CCDC113-204ENST00000566498 TRPA1O75762 1119 aa23.65■■□□□ 1.38
CCDC113-204ENST00000566498 CLASRPQ8N2M8 674 aaKnown RBP23.65■■□□□ 1.38
CCDC113-204ENST00000566498 FAM151AQ8WW52 585 aa23.65■■□□□ 1.38
CCDC113-204ENST00000566498 ZNF512BQ96KM6 892 aaPredicted RBP23.65■■□□□ 1.38
CCDC113-204ENST00000566498 GAKO14976 1311 aa23.64■■□□□ 1.38
CCDC113-204ENST00000566498 RAB11FIP3O75154 756 aa23.64■■□□□ 1.37
CCDC113-204ENST00000566498 NFIAQ12857 509 aa23.64■■□□□ 1.37
CCDC113-204ENST00000566498 SPRYD7Q5W111 196 aa23.64■■□□□ 1.37
CCDC113-204ENST00000566498 RNF186Q9NXI6 227 aa23.64■■□□□ 1.37
CCDC113-204ENST00000566498 MROH7-TTC4A0A0A0MT08 1334 aa23.63■■□□□ 1.37
CCDC113-204ENST00000566498 AK9Q5TCS8 1911 aa23.63■■□□□ 1.37
CCDC113-204ENST00000566498 BTDP43251 543 aa23.63■■□□□ 1.37
CCDC113-204ENST00000566498 MAP3K9P80192 1104 aa23.63■■□□□ 1.37
CCDC113-204ENST00000566498 MIGA2Q7L4E1 593 aa23.63■■□□□ 1.37
CCDC113-204ENST00000566498 NSUN4Q96CB9 384 aaKnown RBP23.63■■□□□ 1.37
CCDC113-204ENST00000566498 CYP2E1P05181 493 aaPredicted RBP23.62■■□□□ 1.37
CCDC113-204ENST00000566498 IFIT2P09913 472 aaKnown RBP23.62■■□□□ 1.37
CCDC113-204ENST00000566498 ZAP70P43403 619 aa23.62■■□□□ 1.37
CCDC113-204ENST00000566498 RRP1P56182 461 aaKnown RBP23.62■■□□□ 1.37
CCDC113-204ENST00000566498 ELP3Q9H9T3 547 aa23.62■■□□□ 1.37
CCDC113-204ENST00000566498 FAM198AQ9UFP1 575 aa23.62■■□□□ 1.37
CCDC113-204ENST00000566498 AKAP11Q9UKA4 1901 aa23.62■■□□□ 1.37
CCDC113-204ENST00000566498 GPR75-ASB3A0A0A6YYF3 556 aa23.61■■□□□ 1.37
CCDC113-204ENST00000566498 TM4SF4P48230 202 aa23.61■■□□□ 1.37
CCDC113-204ENST00000566498 DCAF15Q66K64 600 aa23.61■■□□□ 1.37
CCDC113-204ENST00000566498 NAA16Q6N069 864 aaPredicted RBP23.61■■□□□ 1.37
CCDC113-204ENST00000566498 ZSCAN29Q8IWY8 852 aaPredicted RBP23.61■■□□□ 1.37
CCDC113-204ENST00000566498 ZFPM1Q8IX07 1006 aa23.61■■□□□ 1.37
CCDC113-204ENST00000566498 ZNF384Q8TF68 577 aa23.61■■□□□ 1.37
CCDC113-204ENST00000566498 WNK4Q96J92 1243 aa23.61■■□□□ 1.37
CCDC113-204ENST00000566498 NOL10Q9BSC4 688 aaKnown RBP23.61■■□□□ 1.37
CCDC113-204ENST00000566498 CSADQ9Y600 493 aa23.61■■□□□ 1.37
CCDC113-204ENST00000566498 RGS3P49796 1198 aa23.6■■□□□ 1.37
CCDC113-204ENST00000566498 SREBF2Q12772 1141 aa23.6■■□□□ 1.37
CCDC113-204ENST00000566498 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.6■■□□□ 1.37
CCDC113-204ENST00000566498 SAGE1Q9NXZ1 904 aa23.6■■□□□ 1.37
CCDC113-204ENST00000566498 ZBTB48P10074 688 aaPredicted RBP23.59■■□□□ 1.37
CCDC113-204ENST00000566498 PICALMQ13492 652 aa23.59■■□□□ 1.37
CCDC113-204ENST00000566498 WRNIP1Q96S55 665 aa23.59■■□□□ 1.37
CCDC113-204ENST00000566498 IDI2Q9BXS1 227 aa23.59■■□□□ 1.37
CCDC113-204ENST00000566498 MANSC4A6NHS7 340 aaPredicted RBP23.58■■□□□ 1.37
CCDC113-204ENST00000566498 ENTPD3O75355 529 aa23.58■■□□□ 1.37
CCDC113-204ENST00000566498 INHBEP58166 350 aa23.58■■□□□ 1.37
CCDC113-204ENST00000566498 VGLL4Q14135 290 aa23.58■■□□□ 1.37
CCDC113-204ENST00000566498 IFFO2Q5TF58 517 aa23.58■■□□□ 1.37
CCDC113-204ENST00000566498 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.58■■□□□ 1.37
CCDC113-204ENST00000566498 OPTNQ96CV9 577 aa23.58■■□□□ 1.37
CCDC113-204ENST00000566498 ZNF341Q9BYN7 854 aa23.58■■□□□ 1.37
CCDC113-204ENST00000566498 PIH1D3Q9NQM4 214 aaKnown RBP23.58■■□□□ 1.37
CCDC113-204ENST00000566498 IDH1O75874 414 aaKnown RBP23.57■■□□□ 1.36
CCDC113-204ENST00000566498 BAG3O95817 575 aa23.57■■□□□ 1.36
CCDC113-204ENST00000566498 ZKSCAN4Q969J2 545 aaPredicted RBP23.57■■□□□ 1.36
CCDC113-204ENST00000566498 NDUFB9Q9Y6M9 179 aa23.57■■□□□ 1.36
CCDC113-204ENST00000566498 RPAP1Q9BWH6 1393 aaPredicted RBP23.56■■□□□ 1.36
CCDC113-204ENST00000566498 WDHD1O75717 1129 aaPredicted RBP23.56■■□□□ 1.36
CCDC113-204ENST00000566498 RHBDL3P58872 404 aa23.56■■□□□ 1.36
CCDC113-204ENST00000566498 LRRCC1Q9C099 1032 aa23.56■■□□□ 1.36
CCDC113-204ENST00000566498 MAP4K4O95819 1239 aaPredicted RBP23.55■■□□□ 1.36
CCDC113-204ENST00000566498 AATFQ9NY61 560 aaKnown RBP eCLIP23.55■■□□□ 1.36
CCDC113-204ENST00000566498 TBC1D8O95759 1140 aa23.54■■□□□ 1.36
CCDC113-204ENST00000566498 CYP7A1P22680 504 aa23.54■■□□□ 1.36
CCDC113-204ENST00000566498 GJA5P36382 358 aa23.54■■□□□ 1.36
CCDC113-204ENST00000566498 TEX11Q8IYF3 940 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms