RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 SIL1Q9H173 461 aa20.6■□□□□ 0.89
TSR3-202ENST00000566296 HTTP42858 3142 aa20.59■□□□□ 0.89
TSR3-202ENST00000566296 CIAO1O76071 339 aa20.59■□□□□ 0.89
TSR3-202ENST00000566296 ZKSCAN4Q969J2 545 aaPredicted RBP20.59■□□□□ 0.89
TSR3-202ENST00000566296 PCDH10Q9P2E7 1040 aa20.59■□□□□ 0.89
TSR3-202ENST00000566296 CEP126Q9P2H0 1117 aa20.59■□□□□ 0.89
TSR3-202ENST00000566296 HDAC5Q9UQL6 1122 aa20.59■□□□□ 0.89
TSR3-202ENST00000566296 IRF6O14896 467 aa20.58■□□□□ 0.89
TSR3-202ENST00000566296 CT47B1P0C2W7 299 aaPredicted RBP20.58■□□□□ 0.89
TSR3-202ENST00000566296 KIF22Q14807 665 aa20.58■□□□□ 0.89
TSR3-202ENST00000566296 SLC9C1Q4G0N8 1177 aa20.58■□□□□ 0.89
TSR3-202ENST00000566296 ATG9AQ7Z3C6 839 aa20.58■□□□□ 0.89
TSR3-202ENST00000566296 FAM151AQ8WW52 585 aa20.58■□□□□ 0.89
TSR3-202ENST00000566296 GCC1Q96CN9 775 aa20.58■□□□□ 0.89
TSR3-202ENST00000566296 TMEM106CQ9BVX2 250 aa20.58■□□□□ 0.89
TSR3-202ENST00000566296 DAGLAQ9Y4D2 1042 aa20.58■□□□□ 0.89
TSR3-202ENST00000566296 BTBD19C9JJ37 291 aa20.57■□□□□ 0.88
TSR3-202ENST00000566296 LDHBP07195 334 aaKnown RBP20.57■□□□□ 0.88
TSR3-202ENST00000566296 CAP1Q01518 475 aa20.57■□□□□ 0.88
TSR3-202ENST00000566296 MIGA2Q7L4E1 593 aa20.57■□□□□ 0.88
TSR3-202ENST00000566296 NBPF11Q86T75 865 aa20.57■□□□□ 0.88
TSR3-202ENST00000566296 CDCA7LQ96GN5 454 aa20.57■□□□□ 0.88
TSR3-202ENST00000566296 API5Q9BZZ5 524 aaKnown RBP20.57■□□□□ 0.88
TSR3-202ENST00000566296 PTCH2Q9Y6C5 1203 aa20.57■□□□□ 0.88
TSR3-202ENST00000566296 TLR2O60603 784 aa20.56■□□□□ 0.88
TSR3-202ENST00000566296 PRDX5P30044 214 aa20.56■□□□□ 0.88
TSR3-202ENST00000566296 PPATQ06203 517 aa20.56■□□□□ 0.88
TSR3-202ENST00000566296 DIXDC1Q155Q3 683 aa20.56■□□□□ 0.88
TSR3-202ENST00000566296 ZNF333Q96JL9 665 aa20.56■□□□□ 0.88
TSR3-202ENST00000566296 DENND2AQ9ULE3 1009 aa20.56■□□□□ 0.88
TSR3-202ENST00000566296 SALL1Q9NSC2 1324 aa20.55■□□□□ 0.88
TSR3-202ENST00000566296 SEMA3EO15041 775 aa20.55■□□□□ 0.88
TSR3-202ENST00000566296 INPP5BP32019 993 aa20.55■□□□□ 0.88
TSR3-202ENST00000566296 IL15P40933 162 aaPredicted RBP20.55■□□□□ 0.88
TSR3-202ENST00000566296 TCP10Q12799 353 aa20.55■□□□□ 0.88
TSR3-202ENST00000566296 CDC42EP5Q6NZY7 148 aa20.55■□□□□ 0.88
TSR3-202ENST00000566296 LRRFIP2Q9Y608 721 aaKnown RBP20.55■□□□□ 0.88
TSR3-202ENST00000566296 DOCK2Q92608 1830 aa20.55■□□□□ 0.88
TSR3-202ENST00000566296 ZGPATQ8N5A5 531 aaKnown RBP20.54■□□□□ 0.88
TSR3-202ENST00000566296 NOB1Q9ULX3 412 aaKnown RBP20.54■□□□□ 0.88
TSR3-202ENST00000566296 ZSWIM8A7E2V4 1837 aa20.54■□□□□ 0.88
TSR3-202ENST00000566296 MYH2Q9UKX2 1941 aa20.53■□□□□ 0.88
TSR3-202ENST00000566296 EN2P19622 333 aaPredicted RBP20.53■□□□□ 0.88
TSR3-202ENST00000566296 LACTBP83111 547 aaPredicted RBP20.53■□□□□ 0.88
TSR3-202ENST00000566296 NFIAQ12857 509 aa20.53■□□□□ 0.88
TSR3-202ENST00000566296 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.53■□□□□ 0.88
TSR3-202ENST00000566296 GNRH1P01148 92 aa20.52■□□□□ 0.88
TSR3-202ENST00000566296 PHKA1P46020 1223 aa20.52■□□□□ 0.88
TSR3-202ENST00000566296 SLC4A8Q2Y0W8 1093 aa20.52■□□□□ 0.88
TSR3-202ENST00000566296 USP40Q9NVE5 1235 aa20.52■□□□□ 0.88
TSR3-202ENST00000566296 ZNF112Q9UJU3 913 aa20.52■□□□□ 0.88
TSR3-202ENST00000566296 PA2G4Q9UQ80 394 aaKnown RBP20.52■□□□□ 0.88
TSR3-202ENST00000566296 PRMT2P55345 433 aa20.51■□□□□ 0.87
TSR3-202ENST00000566296 NOL9Q5SY16 702 aaKnown RBP20.51■□□□□ 0.87
TSR3-202ENST00000566296 ANKRD23Q86SG2 305 aa20.51■□□□□ 0.87
TSR3-202ENST00000566296 TRMT2AQ8IZ69 625 aaKnown RBP20.51■□□□□ 0.87
TSR3-202ENST00000566296 ARHGAP39Q9C0H5 1083 aa20.51■□□□□ 0.87
TSR3-202ENST00000566296 KCNH4Q9UQ05 1017 aa20.51■□□□□ 0.87
TSR3-202ENST00000566296 CENPFP49454 3210 aa20.5■□□□□ 0.87
TSR3-202ENST00000566296 DZIP1Q86YF9 867 aaKnown RBP20.5■□□□□ 0.87
TSR3-202ENST00000566296 MEIS3Q99687 375 aa20.5■□□□□ 0.87
TSR3-202ENST00000566296 COPRSQ9NQ92 184 aa20.5■□□□□ 0.87
TSR3-202ENST00000566296 FAM198AQ9UFP1 575 aa20.5■□□□□ 0.87
TSR3-202ENST00000566296 PDHXO00330 501 aa20.49■□□□□ 0.87
TSR3-202ENST00000566296 ZBTB22O15209 634 aa20.49■□□□□ 0.87
TSR3-202ENST00000566296 ADORA1P30542 326 aa20.49■□□□□ 0.87
TSR3-202ENST00000566296 CCDC102BQ68D86 513 aa20.49■□□□□ 0.87
TSR3-202ENST00000566296 SLF2Q8IX21 1173 aa20.49■□□□□ 0.87
TSR3-202ENST00000566296 PARK7Q99497 189 aaKnown RBP20.49■□□□□ 0.87
TSR3-202ENST00000566296 CPA4Q9UI42 421 aa20.49■□□□□ 0.87
TSR3-202ENST00000566296 GAKO14976 1311 aa20.49■□□□□ 0.87
TSR3-202ENST00000566296 ENTPD3O75355 529 aa20.48■□□□□ 0.87
TSR3-202ENST00000566296 MYCP01106 439 aaPredicted RBP20.48■□□□□ 0.87
TSR3-202ENST00000566296 RGS3P49796 1198 aa20.48■□□□□ 0.87
TSR3-202ENST00000566296 C17orf99Q6UX52 265 aa20.48■□□□□ 0.87
TSR3-202ENST00000566296 SH3TC2Q8TF17 1288 aa20.48■□□□□ 0.87
TSR3-202ENST00000566296 PDS5AQ29RF7 1337 aaKnown RBP20.48■□□□□ 0.87
TSR3-202ENST00000566296 ECM2O94769 699 aaPredicted RBP20.47■□□□□ 0.87
TSR3-202ENST00000566296 HOXD10P28358 340 aa20.47■□□□□ 0.87
TSR3-202ENST00000566296 ZSCAN29Q8IWY8 852 aaPredicted RBP20.47■□□□□ 0.87
TSR3-202ENST00000566296 IDI2Q9BXS1 227 aa20.47■□□□□ 0.87
TSR3-202ENST00000566296 PICK1Q9NRD5 415 aa20.47■□□□□ 0.87
TSR3-202ENST00000566296 ABCF2Q9UG63 623 aa20.47■□□□□ 0.87
TSR3-202ENST00000566296 AKAP2Q9Y2D5 859 aa20.47■□□□□ 0.87
TSR3-202ENST00000566296 MKI67P46013 3256 aaKnown RBP20.46■□□□□ 0.87
TSR3-202ENST00000566296 GNAI3P08754 354 aa20.46■□□□□ 0.87
TSR3-202ENST00000566296 RASGRF1Q13972 1273 aa20.46■□□□□ 0.87
TSR3-202ENST00000566296 MVPQ14764 893 aaKnown RBP20.46■□□□□ 0.87
TSR3-202ENST00000566296 SPTY2D1Q68D10 685 aaPredicted RBP20.46■□□□□ 0.87
TSR3-202ENST00000566296 ADGRA2Q96PE1 1338 aa20.46■□□□□ 0.87
TSR3-202ENST00000566296 BRCA2P51587 3418 aa20.46■□□□□ 0.87
TSR3-202ENST00000566296 RFX7Q2KHR2 1363 aa20.46■□□□□ 0.87
TSR3-202ENST00000566296 ATRNL1Q5VV63 1379 aa20.46■□□□□ 0.87
TSR3-202ENST00000566296 DOCK1Q14185 1865 aa20.45■□□□□ 0.86
TSR3-202ENST00000566296 A0A1B0GUL7 405 aa20.45■□□□□ 0.86
TSR3-202ENST00000566296 CXCL11O14625 94 aa20.45■□□□□ 0.86
TSR3-202ENST00000566296 SRGAP3O43295 1099 aa20.45■□□□□ 0.86
TSR3-202ENST00000566296 PSMC4P43686 418 aa20.45■□□□□ 0.86
TSR3-202ENST00000566296 RARSP54136 660 aaKnown RBP20.45■□□□□ 0.86
TSR3-202ENST00000566296 SCYL3Q8IZE3 742 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms