RNA–Protein interactions for RNA: ENST00000565626.1

NSMCE1-210, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 259 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-210ENST00000565626 FKBP1CQ5VVH2 108 aa13.53□□□□□ -0.24
NSMCE1-210ENST00000565626 MIGA2Q7L4E1 593 aa13.53□□□□□ -0.24
NSMCE1-210ENST00000565626 FAM83AQ86UY5 434 aa13.53□□□□□ -0.24
NSMCE1-210ENST00000565626 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.53□□□□□ -0.24
NSMCE1-210ENST00000565626 OPTNQ96CV9 577 aa13.53□□□□□ -0.24
NSMCE1-210ENST00000565626 USP40Q9NVE5 1235 aa13.53□□□□□ -0.24
NSMCE1-210ENST00000565626 UNCXA6NJT0 531 aa13.52□□□□□ -0.25
NSMCE1-210ENST00000565626 GPR25O00155 361 aa13.52□□□□□ -0.25
NSMCE1-210ENST00000565626 TBC1D9Q6ZT07 1266 aa13.52□□□□□ -0.25
NSMCE1-210ENST00000565626 IFNL1Q8IU54 200 aa13.52□□□□□ -0.25
NSMCE1-210ENST00000565626 ZFPM1Q8IX07 1006 aa13.52□□□□□ -0.25
NSMCE1-210ENST00000565626 SSH3Q8TE77 659 aa13.52□□□□□ -0.25
NSMCE1-210ENST00000565626 PTPN18Q99952 460 aa13.52□□□□□ -0.25
NSMCE1-210ENST00000565626 HMG20BQ9P0W2 317 aa13.52□□□□□ -0.25
NSMCE1-210ENST00000565626 FAM198AQ9UFP1 575 aa13.52□□□□□ -0.25
NSMCE1-210ENST00000565626 MYH13Q9UKX3 1938 aa13.52□□□□□ -0.25
NSMCE1-210ENST00000565626 OTOFQ9HC10 1997 aa13.51□□□□□ -0.25
NSMCE1-210ENST00000565626 ZBTB22O15209 634 aa13.51□□□□□ -0.25
NSMCE1-210ENST00000565626 GORABQ5T7V8 394 aa13.51□□□□□ -0.25
NSMCE1-210ENST00000565626 CTU1Q7Z7A3 348 aaKnown RBP13.51□□□□□ -0.25
NSMCE1-210ENST00000565626 ZNF384Q8TF68 577 aa13.51□□□□□ -0.25
NSMCE1-210ENST00000565626 FAM151AQ8WW52 585 aa13.51□□□□□ -0.25
NSMCE1-210ENST00000565626 ZKSCAN4Q969J2 545 aaPredicted RBP13.51□□□□□ -0.25
NSMCE1-210ENST00000565626 WRNIP1Q96S55 665 aa13.51□□□□□ -0.25
NSMCE1-210ENST00000565626 HTTP42858 3142 aa13.51□□□□□ -0.25
NSMCE1-210ENST00000565626 GAKO14976 1311 aa13.5□□□□□ -0.25
NSMCE1-210ENST00000565626 PDS5AQ29RF7 1337 aaKnown RBP13.5□□□□□ -0.25
NSMCE1-210ENST00000565626 SURF6O75683 361 aaKnown RBP13.5□□□□□ -0.25
NSMCE1-210ENST00000565626 MECOMQ03112 1051 aa13.5□□□□□ -0.25
NSMCE1-210ENST00000565626 OS9Q13438 667 aaPredicted RBP13.5□□□□□ -0.25
NSMCE1-210ENST00000565626 DZIP1Q86YF9 867 aaKnown RBP13.5□□□□□ -0.25
NSMCE1-210ENST00000565626 ZGPATQ8N5A5 531 aaKnown RBP13.5□□□□□ -0.25
NSMCE1-210ENST00000565626 SPATA5Q8NB90 893 aa13.5□□□□□ -0.25
NSMCE1-210ENST00000565626 OTUD5Q96G74 571 aa13.5□□□□□ -0.25
NSMCE1-210ENST00000565626 MS4A4AQ96JQ5 239 aa13.5□□□□□ -0.25
NSMCE1-210ENST00000565626 DBNDD2Q9BQY9 259 aa13.5□□□□□ -0.25
NSMCE1-210ENST00000565626 CSADQ9Y600 493 aa13.5□□□□□ -0.25
NSMCE1-210ENST00000565626 SNCAIPQ9Y6H5 919 aa13.5□□□□□ -0.25
NSMCE1-210ENST00000565626 SLURP2P0DP57 97 aa13.49□□□□□ -0.25
NSMCE1-210ENST00000565626 ARID4AP29374 1257 aaPredicted RBP13.49□□□□□ -0.25
NSMCE1-210ENST00000565626 INPP5BP32019 993 aa13.49□□□□□ -0.25
NSMCE1-210ENST00000565626 MCAMP43121 646 aa13.49□□□□□ -0.25
NSMCE1-210ENST00000565626 INHBEP58166 350 aa13.49□□□□□ -0.25
NSMCE1-210ENST00000565626 TNNI3KQ59H18 835 aa13.49□□□□□ -0.25
NSMCE1-210ENST00000565626 CEP85Q6P2H3 762 aa13.49□□□□□ -0.25
NSMCE1-210ENST00000565626 BRI3BPQ8WY22 251 aa13.49□□□□□ -0.25
NSMCE1-210ENST00000565626 CFHR5Q9BXR6 569 aa13.49□□□□□ -0.25
NSMCE1-210ENST00000565626 SNRKQ9NRH2 765 aa13.49□□□□□ -0.25
NSMCE1-210ENST00000565626 FPGT-TNNI3KV9GXZ4 949 aa13.49□□□□□ -0.25
NSMCE1-210ENST00000565626 CENPFP49454 3210 aa13.49□□□□□ -0.25
NSMCE1-210ENST00000565626 RPAP1Q9BWH6 1393 aaPredicted RBP13.48□□□□□ -0.25
NSMCE1-210ENST00000565626 TESPA1A2RU30 521 aaPredicted RBP13.48□□□□□ -0.25
NSMCE1-210ENST00000565626 SPDYE5A6NIY4 337 aa13.48□□□□□ -0.25
NSMCE1-210ENST00000565626 FKTNO75072 461 aa13.48□□□□□ -0.25
NSMCE1-210ENST00000565626 WDHD1O75717 1129 aaPredicted RBP13.48□□□□□ -0.25
NSMCE1-210ENST00000565626 ALDH1A1P00352 501 aa13.48□□□□□ -0.25
NSMCE1-210ENST00000565626 BTDP43251 543 aa13.48□□□□□ -0.25
NSMCE1-210ENST00000565626 RGS3P49796 1198 aa13.48□□□□□ -0.25
NSMCE1-210ENST00000565626 CRHR2Q13324 411 aa13.48□□□□□ -0.25
NSMCE1-210ENST00000565626 SPTY2D1Q68D10 685 aaPredicted RBP13.48□□□□□ -0.25
NSMCE1-210ENST00000565626 ERICH6Q7L0X2 663 aa13.48□□□□□ -0.25
NSMCE1-210ENST00000565626 SH3BP5LQ7L8J4 393 aa13.48□□□□□ -0.25
NSMCE1-210ENST00000565626 ZNF341Q9BYN7 854 aa13.48□□□□□ -0.25
NSMCE1-210ENST00000565626 DDX4Q9NQI0 724 aaKnown RBP13.48□□□□□ -0.25
NSMCE1-210ENST00000565626 TLR7Q9NYK1 1049 aaKnown RBP13.48□□□□□ -0.25
NSMCE1-210ENST00000565626 MROH7-TTC4A0A0A0MT08 1334 aa13.47□□□□□ -0.25
NSMCE1-210ENST00000565626 CCL15-CCL14A0A0B4J2E2 113 aa13.47□□□□□ -0.25
NSMCE1-210ENST00000565626 IRF6O14896 467 aa13.47□□□□□ -0.25
NSMCE1-210ENST00000565626 CCL15Q16663 113 aa13.47□□□□□ -0.25
NSMCE1-210ENST00000565626 NOM1Q5C9Z4 860 aaKnown RBP13.47□□□□□ -0.25
NSMCE1-210ENST00000565626 DCAF15Q66K64 600 aa13.47□□□□□ -0.25
NSMCE1-210ENST00000565626 FAM43AQ8N2R8 423 aa13.47□□□□□ -0.25
NSMCE1-210ENST00000565626 NSUN4Q96CB9 384 aaKnown RBP13.47□□□□□ -0.25
NSMCE1-210ENST00000565626 HOOK2Q96ED9 719 aa13.47□□□□□ -0.25
NSMCE1-210ENST00000565626 FAM163AQ96GL9 167 aaPredicted RBP13.47□□□□□ -0.25
NSMCE1-210ENST00000565626 NOP58Q9Y2X3 529 aaKnown RBP13.47□□□□□ -0.25
NSMCE1-210ENST00000565626 RFX7Q2KHR2 1363 aa13.46□□□□□ -0.25
NSMCE1-210ENST00000565626 DDTLA6NHG4 134 aaPredicted RBP13.46□□□□□ -0.25
NSMCE1-210ENST00000565626 RHBDL3P58872 404 aa13.46□□□□□ -0.25
NSMCE1-210ENST00000565626 CAP1Q01518 475 aa13.46□□□□□ -0.25
NSMCE1-210ENST00000565626 PICALMQ13492 652 aa13.46□□□□□ -0.25
NSMCE1-210ENST00000565626 TTC39AQ5SRH9 613 aa13.46□□□□□ -0.25
NSMCE1-210ENST00000565626 ERO1BQ86YB8 467 aa13.46□□□□□ -0.25
NSMCE1-210ENST00000565626 EAF2Q96CJ1 260 aaPredicted RBP13.46□□□□□ -0.25
NSMCE1-210ENST00000565626 IDI2Q9BXS1 227 aa13.46□□□□□ -0.25
NSMCE1-210ENST00000565626 CCDC8Q9H0W5 538 aaPredicted RBP13.46□□□□□ -0.25
NSMCE1-210ENST00000565626 GPR108Q9NPR9 543 aa13.46□□□□□ -0.25
NSMCE1-210ENST00000565626 RAI14Q9P0K7 980 aa13.46□□□□□ -0.25
NSMCE1-210ENST00000565626 DBNLQ9UJU6 430 aaKnown RBP13.46□□□□□ -0.25
NSMCE1-210ENST00000565626 EXOC6BQ9Y2D4 811 aa13.46□□□□□ -0.25
NSMCE1-210ENST00000565626 COG6Q9Y2V7 657 aa13.46□□□□□ -0.25
NSMCE1-210ENST00000565626 MYH2Q9UKX2 1941 aa13.46□□□□□ -0.25
NSMCE1-210ENST00000565626 ATRNL1Q5VV63 1379 aa13.45□□□□□ -0.26
NSMCE1-210ENST00000565626 GPR75-ASB3A0A0A6YYF3 556 aa13.45□□□□□ -0.26
NSMCE1-210ENST00000565626 UQCRFS1P1P0C7P4 283 aa13.45□□□□□ -0.26
NSMCE1-210ENST00000565626 GTF2A2P52657 109 aa13.45□□□□□ -0.26
NSMCE1-210ENST00000565626 OTUD7BQ6GQQ9 843 aa13.45□□□□□ -0.26
NSMCE1-210ENST00000565626 SLF2Q8IX21 1173 aa13.45□□□□□ -0.26
NSMCE1-210ENST00000565626 LRP2BPQ9P2M1 347 aa13.45□□□□□ -0.26
NSMCE1-210ENST00000565626 ZNF112Q9UJU3 913 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms