RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 OPTNQ96CV9 577 aa19.41■□□□□ 0.7
CDH3-204ENST00000565453 AKAP2Q9Y2D5 859 aa19.41■□□□□ 0.7
CDH3-204ENST00000565453 RGS19P49795 217 aa19.4■□□□□ 0.7
CDH3-204ENST00000565453 CDC42EP5Q6NZY7 148 aa19.4■□□□□ 0.7
CDH3-204ENST00000565453 CNKSR2Q8WXI2 1034 aa19.4■□□□□ 0.7
CDH3-204ENST00000565453 PTPN18Q99952 460 aa19.4■□□□□ 0.7
CDH3-204ENST00000565453 POLA2Q14181 598 aa19.39■□□□□ 0.69
CDH3-204ENST00000565453 FAM151AQ8WW52 585 aa19.39■□□□□ 0.69
CDH3-204ENST00000565453 MS4A4AQ96JQ5 239 aa19.39■□□□□ 0.69
CDH3-204ENST00000565453 GAKO14976 1311 aa19.38■□□□□ 0.69
CDH3-204ENST00000565453 FKTNO75072 461 aa19.38■□□□□ 0.69
CDH3-204ENST00000565453 RLBP1P12271 317 aa19.38■□□□□ 0.69
CDH3-204ENST00000565453 NFIAQ12857 509 aa19.38■□□□□ 0.69
CDH3-204ENST00000565453 MVPQ14764 893 aaKnown RBP19.38■□□□□ 0.69
CDH3-204ENST00000565453 ZGPATQ8N5A5 531 aaKnown RBP19.38■□□□□ 0.69
CDH3-204ENST00000565453 FAM198AQ9UFP1 575 aa19.38■□□□□ 0.69
CDH3-204ENST00000565453 SNCAIPQ9Y6H5 919 aa19.38■□□□□ 0.69
CDH3-204ENST00000565453 SSH3Q8TE77 659 aa19.37■□□□□ 0.69
CDH3-204ENST00000565453 HOOK2Q96ED9 719 aa19.37■□□□□ 0.69
CDH3-204ENST00000565453 CSADQ9Y600 493 aa19.37■□□□□ 0.69
CDH3-204ENST00000565453 RFX7Q2KHR2 1363 aa19.36■□□□□ 0.69
CDH3-204ENST00000565453 SPDYE5A6NIY4 337 aa19.36■□□□□ 0.69
CDH3-204ENST00000565453 ZBTB7BO15156 539 aaPredicted RBP19.36■□□□□ 0.69
CDH3-204ENST00000565453 ATP8B2P98198 1209 aa19.36■□□□□ 0.69
CDH3-204ENST00000565453 G3BP1Q13283 466 aaKnown RBP eCLIP19.36■□□□□ 0.69
CDH3-204ENST00000565453 PKN2Q16513 984 aaKnown RBP19.36■□□□□ 0.69
CDH3-204ENST00000565453 DCAF15Q66K64 600 aa19.36■□□□□ 0.69
CDH3-204ENST00000565453 NEUROD6Q96NK8 337 aa19.36■□□□□ 0.69
CDH3-204ENST00000565453 WRNIP1Q96S55 665 aa19.36■□□□□ 0.69
CDH3-204ENST00000565453 USP40Q9NVE5 1235 aa19.36■□□□□ 0.69
CDH3-204ENST00000565453 MYH2Q9UKX2 1941 aa19.35■□□□□ 0.69
CDH3-204ENST00000565453 TCP10Q12799 353 aa19.35■□□□□ 0.69
CDH3-204ENST00000565453 FTSJ3Q8IY81 847 aaKnown RBP19.35■□□□□ 0.69
CDH3-204ENST00000565453 ZNF384Q8TF68 577 aa19.35■□□□□ 0.69
CDH3-204ENST00000565453 BRI3BPQ8WY22 251 aa19.35■□□□□ 0.69
CDH3-204ENST00000565453 ZKSCAN4Q969J2 545 aaPredicted RBP19.35■□□□□ 0.69
CDH3-204ENST00000565453 FAM163AQ96GL9 167 aaPredicted RBP19.35■□□□□ 0.69
CDH3-204ENST00000565453 C1orf115Q9H7X2 142 aa19.35■□□□□ 0.69
CDH3-204ENST00000565453 HMG20BQ9P0W2 317 aa19.35■□□□□ 0.69
CDH3-204ENST00000565453 ABCF2Q9UG63 623 aa19.35■□□□□ 0.69
CDH3-204ENST00000565453 ZNF112Q9UJU3 913 aa19.35■□□□□ 0.69
CDH3-204ENST00000565453 ARID4AP29374 1257 aaPredicted RBP19.34■□□□□ 0.69
CDH3-204ENST00000565453 CRHR2Q13324 411 aa19.34■□□□□ 0.69
CDH3-204ENST00000565453 OTUD7BQ6GQQ9 843 aa19.34■□□□□ 0.69
CDH3-204ENST00000565453 MIGA2Q7L4E1 593 aa19.34■□□□□ 0.69
CDH3-204ENST00000565453 ERO1BQ86YB8 467 aa19.34■□□□□ 0.69
CDH3-204ENST00000565453 ZFPM1Q8IX07 1006 aa19.34■□□□□ 0.69
CDH3-204ENST00000565453 OTUD5Q96G74 571 aa19.34■□□□□ 0.69
CDH3-204ENST00000565453 IDI2Q9BXS1 227 aa19.34■□□□□ 0.69
CDH3-204ENST00000565453 ZNF341Q9BYN7 854 aa19.34■□□□□ 0.69
CDH3-204ENST00000565453 HPS5Q9UPZ3 1129 aa19.34■□□□□ 0.69
CDH3-204ENST00000565453 ATRNL1Q5VV63 1379 aa19.33■□□□□ 0.69
CDH3-204ENST00000565453 GTF2A2P52657 109 aa19.33■□□□□ 0.68
CDH3-204ENST00000565453 SPTY2D1Q68D10 685 aaPredicted RBP19.33■□□□□ 0.68
CDH3-204ENST00000565453 PI16Q6UXB8 463 aa19.33■□□□□ 0.68
CDH3-204ENST00000565453 DZIP1Q86YF9 867 aaKnown RBP19.33■□□□□ 0.68
CDH3-204ENST00000565453 ITPRIPQ8IWB1 547 aa19.33■□□□□ 0.68
CDH3-204ENST00000565453 GPR108Q9NPR9 543 aa19.33■□□□□ 0.68
CDH3-204ENST00000565453 MROH7-TTC4A0A0A0MT08 1334 aa19.32■□□□□ 0.68
CDH3-204ENST00000565453 CCL15-CCL14A0A0B4J2E2 113 aa19.32■□□□□ 0.68
CDH3-204ENST00000565453 INPP5BP32019 993 aa19.32■□□□□ 0.68
CDH3-204ENST00000565453 MECOMQ03112 1051 aa19.32■□□□□ 0.68
CDH3-204ENST00000565453 CCL15Q16663 113 aa19.32■□□□□ 0.68
CDH3-204ENST00000565453 SPATA5Q8NB90 893 aa19.32■□□□□ 0.68
CDH3-204ENST00000565453 ENTPD3O75355 529 aa19.31■□□□□ 0.68
CDH3-204ENST00000565453 WDHD1O75717 1129 aaPredicted RBP19.31■□□□□ 0.68
CDH3-204ENST00000565453 MCAMP43121 646 aa19.31■□□□□ 0.68
CDH3-204ENST00000565453 RGS3P49796 1198 aa19.31■□□□□ 0.68
CDH3-204ENST00000565453 PPIL2Q13356 520 aa19.31■□□□□ 0.68
CDH3-204ENST00000565453 TNNI3KQ59H18 835 aa19.31■□□□□ 0.68
CDH3-204ENST00000565453 GORABQ5T7V8 394 aa19.31■□□□□ 0.68
CDH3-204ENST00000565453 FBXO46Q6PJ61 603 aaPredicted RBP19.31■□□□□ 0.68
CDH3-204ENST00000565453 ERICH6Q7L0X2 663 aa19.31■□□□□ 0.68
CDH3-204ENST00000565453 SH3BP5LQ7L8J4 393 aa19.31■□□□□ 0.68
CDH3-204ENST00000565453 SLF2Q8IX21 1173 aa19.31■□□□□ 0.68
CDH3-204ENST00000565453 FAM43AQ8N2R8 423 aa19.31■□□□□ 0.68
CDH3-204ENST00000565453 NOP58Q9Y2X3 529 aaKnown RBP19.31■□□□□ 0.68
CDH3-204ENST00000565453 FPGT-TNNI3KV9GXZ4 949 aa19.31■□□□□ 0.68
CDH3-204ENST00000565453 GPR75-ASB3A0A0A6YYF3 556 aa19.3■□□□□ 0.68
CDH3-204ENST00000565453 IRF6O14896 467 aa19.3■□□□□ 0.68
CDH3-204ENST00000565453 BTDP43251 543 aa19.3■□□□□ 0.68
CDH3-204ENST00000565453 RHBDL3P58872 404 aa19.3■□□□□ 0.68
CDH3-204ENST00000565453 MLLT1Q03111 559 aaPredicted RBP19.3■□□□□ 0.68
CDH3-204ENST00000565453 NOL9Q5SY16 702 aaKnown RBP19.3■□□□□ 0.68
CDH3-204ENST00000565453 TBC1D9Q6ZT07 1266 aa19.3■□□□□ 0.68
CDH3-204ENST00000565453 DDX4Q9NQI0 724 aaKnown RBP19.3■□□□□ 0.68
CDH3-204ENST00000565453 DOCK2Q92608 1830 aa19.3■□□□□ 0.68
CDH3-204ENST00000565453 SURF6O75683 361 aaKnown RBP19.29■□□□□ 0.68
CDH3-204ENST00000565453 UQCRFS1P1P0C7P4 283 aa19.29■□□□□ 0.68
CDH3-204ENST00000565453 CAP1Q01518 475 aa19.29■□□□□ 0.68
CDH3-204ENST00000565453 PPATQ06203 517 aa19.29■□□□□ 0.68
CDH3-204ENST00000565453 OTOP1Q7RTM1 612 aa19.29■□□□□ 0.68
CDH3-204ENST00000565453 PANK1Q8TE04 598 aa19.29■□□□□ 0.68
CDH3-204ENST00000565453 NSUN4Q96CB9 384 aaKnown RBP19.29■□□□□ 0.68
CDH3-204ENST00000565453 DBNDD2Q9BQY9 259 aa19.29■□□□□ 0.68
CDH3-204ENST00000565453 CETPP11597 493 aa19.28■□□□□ 0.68
CDH3-204ENST00000565453 SOX10P56693 466 aa19.28■□□□□ 0.68
CDH3-204ENST00000565453 MAP3K10Q02779 954 aa19.28■□□□□ 0.68
CDH3-204ENST00000565453 SNAPC2Q13487 334 aa19.28■□□□□ 0.68
CDH3-204ENST00000565453 CEP85Q6P2H3 762 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms