RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 IFIT2P09913 472 aaKnown RBP12.17□□□□□ -0.46
CDH1-206ENST00000564676 FKBP1BP68106 108 aa12.17□□□□□ -0.46
CDH1-206ENST00000564676 PRKG1Q13976 671 aa12.17□□□□□ -0.46
CDH1-206ENST00000564676 SUPT20HL1Q3ZLR7 823 aa12.17□□□□□ -0.46
CDH1-206ENST00000564676 RGMBQ6NW40 437 aa12.17□□□□□ -0.46
CDH1-206ENST00000564676 TBC1D9Q6ZT07 1266 aa12.17□□□□□ -0.46
CDH1-206ENST00000564676 TLR7Q9NYK1 1049 aaKnown RBP12.17□□□□□ -0.46
CDH1-206ENST00000564676 RAI14Q9P0K7 980 aa12.17□□□□□ -0.46
CDH1-206ENST00000564676 LRP2BPQ9P2M1 347 aa12.17□□□□□ -0.46
CDH1-206ENST00000564676 UBE2Q2LH0YL09 131 aa12.16□□□□□ -0.46
CDH1-206ENST00000564676 HAX1O00165 279 aa12.16□□□□□ -0.46
CDH1-206ENST00000564676 ZNF157P51786 506 aaPredicted RBP12.16□□□□□ -0.46
CDH1-206ENST00000564676 CACNB3P54284 484 aa12.16□□□□□ -0.46
CDH1-206ENST00000564676 MOB2Q70IA6 237 aa12.16□□□□□ -0.46
CDH1-206ENST00000564676 ARMC9Q7Z3E5 817 aa12.16□□□□□ -0.46
CDH1-206ENST00000564676 ZNF512BQ96KM6 892 aaPredicted RBP12.16□□□□□ -0.46
CDH1-206ENST00000564676 PPP1R12BO60237 982 aaPredicted RBP12.15□□□□□ -0.46
CDH1-206ENST00000564676 LDHCP07864 332 aa12.15□□□□□ -0.46
CDH1-206ENST00000564676 GSTO1P78417 241 aa12.15□□□□□ -0.46
CDH1-206ENST00000564676 MECOMQ03112 1051 aa12.15□□□□□ -0.46
CDH1-206ENST00000564676 NBPF12Q5TAG4 269 aaPredicted RBP12.15□□□□□ -0.46
CDH1-206ENST00000564676 CCDC102AQ96A19 550 aa12.15□□□□□ -0.46
CDH1-206ENST00000564676 USP40Q9NVE5 1235 aa12.15□□□□□ -0.46
CDH1-206ENST00000564676 ANGEL1Q9UNK9 670 aaKnown RBP12.15□□□□□ -0.46
CDH1-206ENST00000564676 SUPT16HQ9Y5B9 1047 aaKnown RBP12.15□□□□□ -0.46
CDH1-206ENST00000564676 PCDHB15Q9Y5E8 787 aa12.15□□□□□ -0.46
CDH1-206ENST00000564676 MYH2Q9UKX2 1941 aa12.15□□□□□ -0.46
CDH1-206ENST00000564676 AOC2O75106 756 aa12.14□□□□□ -0.47
CDH1-206ENST00000564676 HSPA1AP0DMV8 641 aaKnown RBP12.14□□□□□ -0.47
CDH1-206ENST00000564676 HSPA1BP0DMV9 641 aaKnown RBP12.14□□□□□ -0.47
CDH1-206ENST00000564676 ZAP70P43403 619 aa12.14□□□□□ -0.47
CDH1-206ENST00000564676 FKBP1CQ5VVH2 108 aa12.14□□□□□ -0.47
CDH1-206ENST00000564676 CDC42EP5Q6NZY7 148 aa12.14□□□□□ -0.47
CDH1-206ENST00000564676 FAM163AQ96GL9 167 aaPredicted RBP12.14□□□□□ -0.47
CDH1-206ENST00000564676 LRRCC1Q9C099 1032 aa12.14□□□□□ -0.47
CDH1-206ENST00000564676 TMEM39BQ9GZU3 492 aa12.14□□□□□ -0.47
CDH1-206ENST00000564676 DCTPP1Q9H773 170 aa12.14□□□□□ -0.47
CDH1-206ENST00000564676 PAPPA2Q9BXP8 1791 aa12.14□□□□□ -0.47
CDH1-206ENST00000564676 GAKO14976 1311 aa12.13□□□□□ -0.47
CDH1-206ENST00000564676 SMARCA5O60264 1052 aaPredicted RBP12.13□□□□□ -0.47
CDH1-206ENST00000564676 CYP2E1P05181 493 aaPredicted RBP12.13□□□□□ -0.47
CDH1-206ENST00000564676 MAP2K2P36507 400 aa12.13□□□□□ -0.47
CDH1-206ENST00000564676 BTDP43251 543 aa12.13□□□□□ -0.47
CDH1-206ENST00000564676 MAP2K1Q02750 393 aaPredicted RBP12.13□□□□□ -0.47
CDH1-206ENST00000564676 NAA16Q6N069 864 aaPredicted RBP12.13□□□□□ -0.47
CDH1-206ENST00000564676 FAM83AQ86UY5 434 aa12.13□□□□□ -0.47
CDH1-206ENST00000564676 NSUN4Q96CB9 384 aaKnown RBP12.13□□□□□ -0.47
CDH1-206ENST00000564676 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.13□□□□□ -0.47
CDH1-206ENST00000564676 FZD1Q9UP38 647 aa12.13□□□□□ -0.47
CDH1-206ENST00000564676 AKAP11Q9UKA4 1901 aa12.13□□□□□ -0.47
CDH1-206ENST00000564676 MROH7-TTC4A0A0A0MT08 1334 aa12.12□□□□□ -0.47
CDH1-206ENST00000564676 AK9Q5TCS8 1911 aa12.12□□□□□ -0.47
CDH1-206ENST00000564676 IREB2P48200 963 aaKnown RBP12.12□□□□□ -0.47
CDH1-206ENST00000564676 TCP10Q12799 353 aa12.12□□□□□ -0.47
CDH1-206ENST00000564676 NOGQ13253 232 aa12.12□□□□□ -0.47
CDH1-206ENST00000564676 AIDAQ96BJ3 306 aa12.12□□□□□ -0.47
CDH1-206ENST00000564676 TEPSINQ96N21 525 aa12.12□□□□□ -0.47
CDH1-206ENST00000564676 NOL10Q9BSC4 688 aaKnown RBP12.12□□□□□ -0.47
CDH1-206ENST00000564676 BEGAINQ9BUH8 593 aa12.12□□□□□ -0.47
CDH1-206ENST00000564676 PIH1D3Q9NQM4 214 aaKnown RBP12.12□□□□□ -0.47
CDH1-206ENST00000564676 NDUFB9Q9Y6M9 179 aa12.12□□□□□ -0.47
CDH1-206ENST00000564676 GPR75-ASB3A0A0A6YYF3 556 aa12.11□□□□□ -0.47
CDH1-206ENST00000564676 IDH1O75874 414 aaKnown RBP12.11□□□□□ -0.47
CDH1-206ENST00000564676 SLC10A3P09131 477 aa12.11□□□□□ -0.47
CDH1-206ENST00000564676 NFIAQ12857 509 aa12.11□□□□□ -0.47
CDH1-206ENST00000564676 AAMPQ13685 434 aa12.11□□□□□ -0.47
CDH1-206ENST00000564676 RASAL3Q86YV0 1011 aa12.11□□□□□ -0.47
CDH1-206ENST00000564676 CDAN1Q8IWY9 1227 aa12.11□□□□□ -0.47
CDH1-206ENST00000564676 ZNF384Q8TF68 577 aa12.11□□□□□ -0.47
CDH1-206ENST00000564676 FAM151AQ8WW52 585 aa12.11□□□□□ -0.47
CDH1-206ENST00000564676 SLC10A4Q96EP9 437 aa12.11□□□□□ -0.47
CDH1-206ENST00000564676 FAM155AB1AL88 458 aaPredicted RBP12.1□□□□□ -0.47
CDH1-206ENST00000564676 IGSF3O75054 1194 aa12.1□□□□□ -0.47
CDH1-206ENST00000564676 USP2O75604 605 aaPredicted RBP12.1□□□□□ -0.47
CDH1-206ENST00000564676 BAG3O95817 575 aa12.1□□□□□ -0.47
CDH1-206ENST00000564676 RGS3P49796 1198 aa12.1□□□□□ -0.47
CDH1-206ENST00000564676 MAP3K12Q12852 859 aa12.1□□□□□ -0.47
CDH1-206ENST00000564676 MAP3K11Q16584 847 aa12.1□□□□□ -0.47
CDH1-206ENST00000564676 LDLRAD1Q5T700 205 aa12.1□□□□□ -0.47
CDH1-206ENST00000564676 EXOC6Q8TAG9 804 aa12.1□□□□□ -0.47
CDH1-206ENST00000564676 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.1□□□□□ -0.47
CDH1-206ENST00000564676 HOOK2Q96ED9 719 aa12.1□□□□□ -0.47
CDH1-206ENST00000564676 ZIC5Q96T25 663 aa12.1□□□□□ -0.47
CDH1-206ENST00000564676 DNAJC2Q99543 621 aaKnown RBP12.1□□□□□ -0.47
CDH1-206ENST00000564676 BOLA2Q9H3K6 86 aa12.1□□□□□ -0.47
CDH1-206ENST00000564676 ANTXR1Q9H6X2 564 aa12.1□□□□□ -0.47
CDH1-206ENST00000564676 WBP1LQ9NX94 342 aa12.1□□□□□ -0.47
CDH1-206ENST00000564676 ZBTB47Q9UFB7 747 aaPredicted RBP12.1□□□□□ -0.47
CDH1-206ENST00000564676 FAM198AQ9UFP1 575 aa12.1□□□□□ -0.47
CDH1-206ENST00000564676 SSC5DA1L4H1 1573 aa12.09□□□□□ -0.47
CDH1-206ENST00000564676 ENTPD3O75355 529 aa12.09□□□□□ -0.47
CDH1-206ENST00000564676 MAP4K4O95819 1239 aaPredicted RBP12.09□□□□□ -0.47
CDH1-206ENST00000564676 CYP7A1P22680 504 aa12.09□□□□□ -0.47
CDH1-206ENST00000564676 KIF23Q02241 960 aaPredicted RBP12.09□□□□□ -0.47
CDH1-206ENST00000564676 MKRN3Q13064 507 aaKnown RBP12.09□□□□□ -0.47
CDH1-206ENST00000564676 PICALMQ13492 652 aa12.09□□□□□ -0.47
CDH1-206ENST00000564676 TTF1Q15361 905 aaPredicted RBP12.09□□□□□ -0.47
CDH1-206ENST00000564676 DCAF15Q66K64 600 aa12.09□□□□□ -0.47
CDH1-206ENST00000564676 ZSCAN29Q8IWY8 852 aaPredicted RBP12.09□□□□□ -0.47
CDH1-206ENST00000564676 MAGEB6Q8N7X4 407 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms