RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 USP17L3A6NCW0 530 aa8.83□□□□□ -1
MAP1LC3B-205ENST00000564638 USP17L4A6NCW7 530 aa8.83□□□□□ -1
MAP1LC3B-205ENST00000564638 RNF113AO15541 343 aaKnown RBP8.83□□□□□ -1
MAP1LC3B-205ENST00000564638 BAG4O95429 457 aaKnown RBP8.83□□□□□ -1
MAP1LC3B-205ENST00000564638 ZFYP08048 801 aaPredicted RBP8.83□□□□□ -1
MAP1LC3B-205ENST00000564638 HSPA8P11142 646 aaKnown RBP8.83□□□□□ -1
MAP1LC3B-205ENST00000564638 HIBADHP31937 336 aaKnown RBP8.83□□□□□ -1
MAP1LC3B-205ENST00000564638 CTCFP49711 727 aaPredicted RBP8.83□□□□□ -1
MAP1LC3B-205ENST00000564638 GMPSP49915 693 aaPredicted RBP8.83□□□□□ -1
MAP1LC3B-205ENST00000564638 GTF2IP78347 998 aa8.83□□□□□ -1
MAP1LC3B-205ENST00000564638 CHAF1AQ13111 956 aaPredicted RBP8.83□□□□□ -1
MAP1LC3B-205ENST00000564638 ANKRD1Q15327 319 aa8.83□□□□□ -1
MAP1LC3B-205ENST00000564638 EAPPQ56P03 285 aaPredicted RBP8.83□□□□□ -1
MAP1LC3B-205ENST00000564638 CAVIN4Q5BKX8 364 aa8.83□□□□□ -1
MAP1LC3B-205ENST00000564638 ZMYM1Q5SVZ6 1142 aa8.83□□□□□ -1
MAP1LC3B-205ENST00000564638 BLOC1S2Q6QNY1 142 aa8.83□□□□□ -1
MAP1LC3B-205ENST00000564638 C15orf52Q6ZUT6 534 aaKnown RBP8.83□□□□□ -1
MAP1LC3B-205ENST00000564638 RUFY3Q7L099 469 aa8.83□□□□□ -1
MAP1LC3B-205ENST00000564638 USP17L1Q7RTZ2 530 aa8.83□□□□□ -1
MAP1LC3B-205ENST00000564638 PODNQ7Z5L7 613 aa8.83□□□□□ -1
MAP1LC3B-205ENST00000564638 ZNF589Q86UQ0 364 aaPredicted RBP8.83□□□□□ -1
MAP1LC3B-205ENST00000564638 LPIN2Q92539 896 aa8.83□□□□□ -1
MAP1LC3B-205ENST00000564638 ZSWIM6Q9HCJ5 1215 aa8.83□□□□□ -1
MAP1LC3B-205ENST00000564638 CD209Q9NNX6 404 aa8.83□□□□□ -1
MAP1LC3B-205ENST00000564638 JAG2Q9Y219 1238 aa8.83□□□□□ -1
MAP1LC3B-205ENST00000564638 ZBTB12Q9Y330 459 aaPredicted RBP8.83□□□□□ -1
MAP1LC3B-205ENST00000564638 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.83□□□□□ -1
MAP1LC3B-205ENST00000564638 NDUFB9Q9Y6M9 179 aa8.83□□□□□ -1
MAP1LC3B-205ENST00000564638 MKI67P46013 3256 aaKnown RBP8.83□□□□□ -1
MAP1LC3B-205ENST00000564638 IRS2Q9Y4H2 1338 aa8.82□□□□□ -1
MAP1LC3B-205ENST00000564638 SCN4AP35499 1836 aa8.82□□□□□ -1
MAP1LC3B-205ENST00000564638 SZT2Q5T011 3432 aa8.82□□□□□ -1
MAP1LC3B-205ENST00000564638 IQCA1LA6NCM1 817 aa8.82□□□□□ -1
MAP1LC3B-205ENST00000564638 POTEIP0CG38 1075 aa8.82□□□□□ -1
MAP1LC3B-205ENST00000564638 POTEJP0CG39 1038 aa8.82□□□□□ -1
MAP1LC3B-205ENST00000564638 VEGFAP15692 232 aaPredicted RBP8.82□□□□□ -1
MAP1LC3B-205ENST00000564638 FGFR2P21802 821 aa8.82□□□□□ -1
MAP1LC3B-205ENST00000564638 ADORA1P30542 326 aa8.82□□□□□ -1
MAP1LC3B-205ENST00000564638 BCAMP50895 628 aa8.82□□□□□ -1
MAP1LC3B-205ENST00000564638 ADCK5Q3MIX3 580 aa8.82□□□□□ -1
MAP1LC3B-205ENST00000564638 TSGA10IPQ3SY00 556 aa8.82□□□□□ -1
MAP1LC3B-205ENST00000564638 FAM84BQ96KN1 310 aaPredicted RBP8.82□□□□□ -1
MAP1LC3B-205ENST00000564638 DSCC1Q9BVC3 393 aa8.82□□□□□ -1
MAP1LC3B-205ENST00000564638 MXD3Q9BW11 206 aa8.82□□□□□ -1
MAP1LC3B-205ENST00000564638 CREBZFQ9NS37 354 aa8.82□□□□□ -1
MAP1LC3B-205ENST00000564638 HACL1Q9UJ83 578 aa8.82□□□□□ -1
MAP1LC3B-205ENST00000564638 MYO5AQ9Y4I1 1855 aaKnown RBP8.82□□□□□ -1
MAP1LC3B-205ENST00000564638 MAST3O60307 1309 aa8.81□□□□□ -1
MAP1LC3B-205ENST00000564638 WDR33Q9C0J8 1336 aaKnown RBP8.81□□□□□ -1
MAP1LC3B-205ENST00000564638 SHTN1A0MZ66 631 aa8.81□□□□□ -1
MAP1LC3B-205ENST00000564638 VIL1P09327 827 aaKnown RBP8.81□□□□□ -1
MAP1LC3B-205ENST00000564638 UQCRFS1P1P0C7P4 283 aa8.81□□□□□ -1
MAP1LC3B-205ENST00000564638 EPHX2P34913 555 aa8.81□□□□□ -1
MAP1LC3B-205ENST00000564638 EPS15P42566 896 aa8.81□□□□□ -1
MAP1LC3B-205ENST00000564638 VEGFBP49765 207 aa8.81□□□□□ -1
MAP1LC3B-205ENST00000564638 TTF1Q15361 905 aaPredicted RBP8.81□□□□□ -1
MAP1LC3B-205ENST00000564638 L1TD1Q5T7N2 865 aaKnown RBP8.81□□□□□ -1
MAP1LC3B-205ENST00000564638 TTLL5Q6EMB2 1281 aa8.81□□□□□ -1
MAP1LC3B-205ENST00000564638 ZSCAN25Q6NSZ9 544 aa8.81□□□□□ -1
MAP1LC3B-205ENST00000564638 RSBN1LQ6PCB5 846 aaPredicted RBP8.81□□□□□ -1
MAP1LC3B-205ENST00000564638 CCDC129Q6ZRS4 1044 aa8.81□□□□□ -1
MAP1LC3B-205ENST00000564638 FBXO33Q7Z6M2 555 aa8.81□□□□□ -1
MAP1LC3B-205ENST00000564638 L3MBTL3Q96JM7 780 aaPredicted RBP8.81□□□□□ -1
MAP1LC3B-205ENST00000564638 ZNF512BQ96KM6 892 aaPredicted RBP8.81□□□□□ -1
MAP1LC3B-205ENST00000564638 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.81□□□□□ -1
MAP1LC3B-205ENST00000564638 SMC3Q9UQE7 1217 aa8.81□□□□□ -1
MAP1LC3B-205ENST00000564638 CLEC11AQ9Y240 323 aa8.81□□□□□ -1
MAP1LC3B-205ENST00000564638 ZNF646O15015 1829 aaPredicted RBP8.8□□□□□ -1
MAP1LC3B-205ENST00000564638 CCDC85CA6NKD9 419 aa8.8□□□□□ -1
MAP1LC3B-205ENST00000564638 F8W031 263 aaPredicted RBP8.8□□□□□ -1
MAP1LC3B-205ENST00000564638 H7C1D1 291 aa8.8□□□□□ -1
MAP1LC3B-205ENST00000564638 BRD1O95696 1058 aa8.8□□□□□ -1
MAP1LC3B-205ENST00000564638 IL1R1P14778 569 aa8.8□□□□□ -1
MAP1LC3B-205ENST00000564638 CPA1P15085 419 aa8.8□□□□□ -1
MAP1LC3B-205ENST00000564638 RPS6KB1P23443 525 aa8.8□□□□□ -1
MAP1LC3B-205ENST00000564638 PHKA1P46020 1223 aa8.8□□□□□ -1
MAP1LC3B-205ENST00000564638 SCNN1DP51172 638 aa8.8□□□□□ -1
MAP1LC3B-205ENST00000564638 PKP1Q13835 747 aa8.8□□□□□ -1
MAP1LC3B-205ENST00000564638 DACT2Q5SW24 774 aa8.8□□□□□ -1
MAP1LC3B-205ENST00000564638 RBM26Q5T8P6 1007 aaKnown RBP8.8□□□□□ -1
MAP1LC3B-205ENST00000564638 STRIP1Q5VSL9 837 aa8.8□□□□□ -1
MAP1LC3B-205ENST00000564638 MCTP1Q6DN14 999 aa8.8□□□□□ -1
MAP1LC3B-205ENST00000564638 MICALL2Q8IY33 904 aa8.8□□□□□ -1
MAP1LC3B-205ENST00000564638 TDRD7Q8NHU6 1098 aaKnown RBP8.8□□□□□ -1
MAP1LC3B-205ENST00000564638 ALDH8A1Q9H2A2 487 aaPredicted RBP8.8□□□□□ -1
MAP1LC3B-205ENST00000564638 TAF1DQ9H5J8 278 aaPredicted RBP8.8□□□□□ -1
MAP1LC3B-205ENST00000564638 GNL3LQ9NVN8 582 aaKnown RBP8.8□□□□□ -1
MAP1LC3B-205ENST00000564638 GPRC5DQ9NZD1 345 aa8.8□□□□□ -1
MAP1LC3B-205ENST00000564638 CNOT7Q9UIV1 285 aaKnown RBP8.8□□□□□ -1
MAP1LC3B-205ENST00000564638 PASKQ96RG2 1323 aa8.8□□□□□ -1
MAP1LC3B-205ENST00000564638 HMGB1P09429 215 aaKnown RBP8.79□□□□□ -1
MAP1LC3B-205ENST00000564638 RPS12P25398 132 aaKnown RBP8.79□□□□□ -1
MAP1LC3B-205ENST00000564638 ARID4AP29374 1257 aaPredicted RBP8.79□□□□□ -1
MAP1LC3B-205ENST00000564638 ZAP70P43403 619 aa8.79□□□□□ -1
MAP1LC3B-205ENST00000564638 TBC1D10BQ4KMP7 808 aaPredicted RBP8.79□□□□□ -1
MAP1LC3B-205ENST00000564638 MFSD14BQ5SR56 506 aa8.79□□□□□ -1
MAP1LC3B-205ENST00000564638 CCDC102BQ68D86 513 aa8.79□□□□□ -1
MAP1LC3B-205ENST00000564638 KIAA0825Q8IV33 1275 aa8.79□□□□□ -1
MAP1LC3B-205ENST00000564638 CCDC83Q8IWF9 413 aa8.79□□□□□ -1
MAP1LC3B-205ENST00000564638 AGBL3Q8NEM8 1001 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms