RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 WDR66Q8TBY9 1149 aa17.65■□□□□ 0.42
CDR2-204ENST00000564542 LPIN2Q92539 896 aa17.65■□□□□ 0.42
CDR2-204ENST00000564542 BTBD19C9JJ37 291 aa17.64■□□□□ 0.41
CDR2-204ENST00000564542 E9PSI1 815 aa17.64■□□□□ 0.41
CDR2-204ENST00000564542 RFX5P48382 616 aaPredicted RBP17.64■□□□□ 0.41
CDR2-204ENST00000564542 LACTBP83111 547 aaPredicted RBP17.64■□□□□ 0.41
CDR2-204ENST00000564542 KIF22Q14807 665 aa17.64■□□□□ 0.41
CDR2-204ENST00000564542 ZNF341Q9BYN7 854 aa17.64■□□□□ 0.41
CDR2-204ENST00000564542 GNRH1P01148 92 aa17.63■□□□□ 0.41
CDR2-204ENST00000564542 ZEB1P37275 1124 aaPredicted RBP17.63■□□□□ 0.41
CDR2-204ENST00000564542 PPATQ06203 517 aa17.63■□□□□ 0.41
CDR2-204ENST00000564542 FAM151AQ8WW52 585 aa17.63■□□□□ 0.41
CDR2-204ENST00000564542 HABP4Q5JVS0 413 aaKnown RBP17.62■□□□□ 0.41
CDR2-204ENST00000564542 MIGA2Q7L4E1 593 aa17.62■□□□□ 0.41
CDR2-204ENST00000564542 ATG9AQ7Z3C6 839 aa17.62■□□□□ 0.41
CDR2-204ENST00000564542 ARHGAP39Q9C0H5 1083 aa17.62■□□□□ 0.41
CDR2-204ENST00000564542 DAGLAQ9Y4D2 1042 aa17.62■□□□□ 0.41
CDR2-204ENST00000564542 INPP5BP32019 993 aa17.61■□□□□ 0.41
CDR2-204ENST00000564542 ALDH1L2Q3SY69 923 aa17.61■□□□□ 0.41
CDR2-204ENST00000564542 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.61■□□□□ 0.41
CDR2-204ENST00000564542 FBXO3Q9UK99 471 aa17.61■□□□□ 0.41
CDR2-204ENST00000564542 CIAO1O76071 339 aa17.6■□□□□ 0.41
CDR2-204ENST00000564542 PRMT2P55345 433 aa17.6■□□□□ 0.41
CDR2-204ENST00000564542 DIXDC1Q155Q3 683 aa17.6■□□□□ 0.41
CDR2-204ENST00000564542 SLC4A8Q2Y0W8 1093 aa17.6■□□□□ 0.41
CDR2-204ENST00000564542 CDC42EP5Q6NZY7 148 aa17.6■□□□□ 0.41
CDR2-204ENST00000564542 ANKRD23Q86SG2 305 aa17.6■□□□□ 0.41
CDR2-204ENST00000564542 ZNF112Q9UJU3 913 aa17.6■□□□□ 0.41
CDR2-204ENST00000564542 KCNH4Q9UQ05 1017 aa17.6■□□□□ 0.41
CDR2-204ENST00000564542 DOCK2Q92608 1830 aa17.59■□□□□ 0.41
CDR2-204ENST00000564542 ADGRA2Q96PE1 1338 aa17.59■□□□□ 0.41
CDR2-204ENST00000564542 SALL1Q9NSC2 1324 aa17.59■□□□□ 0.41
CDR2-204ENST00000564542 PRDX5P30044 214 aa17.59■□□□□ 0.41
CDR2-204ENST00000564542 SLFN5Q08AF3 891 aa17.59■□□□□ 0.41
CDR2-204ENST00000564542 TCP10Q12799 353 aa17.59■□□□□ 0.41
CDR2-204ENST00000564542 NFIAQ12857 509 aa17.59■□□□□ 0.41
CDR2-204ENST00000564542 ATP2B3Q16720 1220 aa17.59■□□□□ 0.41
CDR2-204ENST00000564542 NOL9Q5SY16 702 aaKnown RBP17.59■□□□□ 0.41
CDR2-204ENST00000564542 C17orf99Q6UX52 265 aa17.59■□□□□ 0.41
CDR2-204ENST00000564542 SH3TC2Q8TF17 1288 aa17.59■□□□□ 0.41
CDR2-204ENST00000564542 GNL3LQ9NVN8 582 aaKnown RBP17.59■□□□□ 0.41
CDR2-204ENST00000564542 AK9Q5TCS8 1911 aa17.59■□□□□ 0.41
CDR2-204ENST00000564542 LDHBP07195 334 aaKnown RBP17.58■□□□□ 0.4
CDR2-204ENST00000564542 UBTFL1P0CB47 393 aaPredicted RBP17.58■□□□□ 0.4
CDR2-204ENST00000564542 SIL1Q9H173 461 aa17.58■□□□□ 0.4
CDR2-204ENST00000564542 SMC4Q9NTJ3 1288 aa17.58■□□□□ 0.4
CDR2-204ENST00000564542 FAM198AQ9UFP1 575 aa17.58■□□□□ 0.4
CDR2-204ENST00000564542 PDHXO00330 501 aa17.57■□□□□ 0.4
CDR2-204ENST00000564542 SEMA3EO15041 775 aa17.57■□□□□ 0.4
CDR2-204ENST00000564542 MYCP01106 439 aaPredicted RBP17.57■□□□□ 0.4
CDR2-204ENST00000564542 CEP126Q9P2H0 1117 aa17.57■□□□□ 0.4
CDR2-204ENST00000564542 CPA4Q9UI42 421 aa17.57■□□□□ 0.4
CDR2-204ENST00000564542 ATRNL1Q5VV63 1379 aa17.56■□□□□ 0.4
CDR2-204ENST00000564542 ZBTB22O15209 634 aa17.56■□□□□ 0.4
CDR2-204ENST00000564542 CTGFP29279 349 aa17.56■□□□□ 0.4
CDR2-204ENST00000564542 MOGSQ13724 837 aa17.56■□□□□ 0.4
CDR2-204ENST00000564542 TRIM47Q96LD4 638 aa17.56■□□□□ 0.4
CDR2-204ENST00000564542 USP40Q9NVE5 1235 aa17.56■□□□□ 0.4
CDR2-204ENST00000564542 DENND2AQ9ULE3 1009 aa17.56■□□□□ 0.4
CDR2-204ENST00000564542 RFX7Q2KHR2 1363 aa17.55■□□□□ 0.4
CDR2-204ENST00000564542 IL15P40933 162 aaPredicted RBP17.55■□□□□ 0.4
CDR2-204ENST00000564542 PSMC4P43686 418 aa17.55■□□□□ 0.4
CDR2-204ENST00000564542 PHKA1P46020 1223 aa17.55■□□□□ 0.4
CDR2-204ENST00000564542 PARK7Q99497 189 aaKnown RBP17.55■□□□□ 0.4
CDR2-204ENST00000564542 SRRDQ9UH36 339 aa17.55■□□□□ 0.4
CDR2-204ENST00000564542 MYH2Q9UKX2 1941 aa17.55■□□□□ 0.4
CDR2-204ENST00000564542 OSBPP22059 807 aa17.54■□□□□ 0.4
CDR2-204ENST00000564542 HOXD10P28358 340 aa17.54■□□□□ 0.4
CDR2-204ENST00000564542 ZGPATQ8N5A5 531 aaKnown RBP17.54■□□□□ 0.4
CDR2-204ENST00000564542 GAKO14976 1311 aa17.53■□□□□ 0.4
CDR2-204ENST00000564542 CXCL11O14625 94 aa17.53■□□□□ 0.4
CDR2-204ENST00000564542 ENTPD3O75355 529 aa17.53■□□□□ 0.4
CDR2-204ENST00000564542 ECM2O94769 699 aaPredicted RBP17.53■□□□□ 0.4
CDR2-204ENST00000564542 ZFPM1Q8IX07 1006 aa17.53■□□□□ 0.4
CDR2-204ENST00000564542 IDI2Q9BXS1 227 aa17.53■□□□□ 0.4
CDR2-204ENST00000564542 HDAC5Q9UQL6 1122 aa17.53■□□□□ 0.4
CDR2-204ENST00000564542 LRRFIP2Q9Y608 721 aaKnown RBP17.53■□□□□ 0.4
CDR2-204ENST00000564542 MGAMO43451 1857 aa17.52■□□□□ 0.4
CDR2-204ENST00000564542 DOCK1Q14185 1865 aa17.52■□□□□ 0.4
CDR2-204ENST00000564542 PDS5AQ29RF7 1337 aaKnown RBP17.52■□□□□ 0.4
CDR2-204ENST00000564542 MYPNQ86TC9 1320 aa17.52■□□□□ 0.4
CDR2-204ENST00000564542 PHF20L1A8MW92 1017 aa17.52■□□□□ 0.4
CDR2-204ENST00000564542 FMNL1O95466 1100 aaPredicted RBP17.52■□□□□ 0.4
CDR2-204ENST00000564542 CT47B1P0C2W7 299 aaPredicted RBP17.52■□□□□ 0.4
CDR2-204ENST00000564542 RGS3P49796 1198 aa17.52■□□□□ 0.4
CDR2-204ENST00000564542 FXR1P51114 621 aaKnown RBP eCLIP17.52■□□□□ 0.4
CDR2-204ENST00000564542 CCDC102BQ68D86 513 aa17.52■□□□□ 0.4
CDR2-204ENST00000564542 GPAT2Q6NUI2 795 aa17.52■□□□□ 0.4
CDR2-204ENST00000564542 TRMT2AQ8IZ69 625 aaKnown RBP17.52■□□□□ 0.4
CDR2-204ENST00000564542 SCYL3Q8IZE3 742 aa17.52■□□□□ 0.4
CDR2-204ENST00000564542 RAET1EQ8TD07 263 aa17.52■□□□□ 0.4
CDR2-204ENST00000564542 SHISA4Q96DD7 197 aa17.52■□□□□ 0.4
CDR2-204ENST00000564542 CDCA7LQ96GN5 454 aa17.52■□□□□ 0.4
CDR2-204ENST00000564542 API5Q9BZZ5 524 aaKnown RBP17.52■□□□□ 0.4
CDR2-204ENST00000564542 COPRSQ9NQ92 184 aa17.52■□□□□ 0.4
CDR2-204ENST00000564542 PTPRFP10586 1907 aa17.51■□□□□ 0.39
CDR2-204ENST00000564542 A0A0G2JLL6 359 aaPredicted RBP17.51■□□□□ 0.39
CDR2-204ENST00000564542 BCRP11274 1271 aa17.51■□□□□ 0.39
CDR2-204ENST00000564542 ADORA1P30542 326 aa17.51■□□□□ 0.39
CDR2-204ENST00000564542 GRK4P32298 578 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms