RNA–Protein interactions for RNA: ENST00000562874.2

SF3B3-203, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-203ENST00000562874 XAGE2Q96GT9 111 aa19.5■□□□□ 0.71
SF3B3-203ENST00000562874 SIPA1L1O43166 1804 aa19.49■□□□□ 0.71
SF3B3-203ENST00000562874 TCP10Q12799 353 aa19.49■□□□□ 0.71
SF3B3-203ENST00000562874 FTSJ3Q8IY81 847 aaKnown RBP19.49■□□□□ 0.71
SF3B3-203ENST00000562874 SALL1Q9NSC2 1324 aa19.49■□□□□ 0.71
SF3B3-203ENST00000562874 MGAMO43451 1857 aa19.48■□□□□ 0.71
SF3B3-203ENST00000562874 SEMA3EO15041 775 aa19.48■□□□□ 0.71
SF3B3-203ENST00000562874 RLBP1P12271 317 aa19.48■□□□□ 0.71
SF3B3-203ENST00000562874 NFIAQ12857 509 aa19.48■□□□□ 0.71
SF3B3-203ENST00000562874 CDC42EP5Q6NZY7 148 aa19.48■□□□□ 0.71
SF3B3-203ENST00000562874 FAM83AQ86UY5 434 aa19.48■□□□□ 0.71
SF3B3-203ENST00000562874 ITPRIPQ8IWB1 547 aa19.48■□□□□ 0.71
SF3B3-203ENST00000562874 OTUD5Q96G74 571 aa19.48■□□□□ 0.71
SF3B3-203ENST00000562874 NEUROD6Q96NK8 337 aa19.48■□□□□ 0.71
SF3B3-203ENST00000562874 ABCF2Q9UG63 623 aa19.48■□□□□ 0.71
SF3B3-203ENST00000562874 PI16Q6UXB8 463 aa19.47■□□□□ 0.71
SF3B3-203ENST00000562874 WRNIP1Q96S55 665 aa19.47■□□□□ 0.71
SF3B3-203ENST00000562874 MRIQ9BWK5 157 aa19.47■□□□□ 0.71
SF3B3-203ENST00000562874 CSADQ9Y600 493 aa19.47■□□□□ 0.71
SF3B3-203ENST00000562874 RBBP6Q7Z6E9 1792 aaKnown RBP19.47■□□□□ 0.71
SF3B3-203ENST00000562874 UNCXA6NJT0 531 aa19.46■□□□□ 0.71
SF3B3-203ENST00000562874 MAP3K9P80192 1104 aa19.46■□□□□ 0.71
SF3B3-203ENST00000562874 MIGA2Q7L4E1 593 aa19.46■□□□□ 0.71
SF3B3-203ENST00000562874 DZIP1Q86YF9 867 aaKnown RBP19.46■□□□□ 0.71
SF3B3-203ENST00000562874 AKAP2Q9Y2D5 859 aa19.46■□□□□ 0.71
SF3B3-203ENST00000562874 SNCAIPQ9Y6H5 919 aa19.46■□□□□ 0.71
SF3B3-203ENST00000562874 MYH1P12882 1939 aa19.46■□□□□ 0.71
SF3B3-203ENST00000562874 RFX7Q2KHR2 1363 aa19.45■□□□□ 0.7
SF3B3-203ENST00000562874 FKTNO75072 461 aa19.45■□□□□ 0.7
SF3B3-203ENST00000562874 SOX10P56693 466 aa19.45■□□□□ 0.7
SF3B3-203ENST00000562874 MVPQ14764 893 aaKnown RBP19.45■□□□□ 0.7
SF3B3-203ENST00000562874 FKBP1CQ5VVH2 108 aa19.45■□□□□ 0.7
SF3B3-203ENST00000562874 ZKSCAN4Q969J2 545 aaPredicted RBP19.45■□□□□ 0.7
SF3B3-203ENST00000562874 PTPN18Q99952 460 aa19.45■□□□□ 0.7
SF3B3-203ENST00000562874 CFHR5Q9BXR6 569 aa19.45■□□□□ 0.7
SF3B3-203ENST00000562874 ALDH1A1P00352 501 aa19.44■□□□□ 0.7
SF3B3-203ENST00000562874 G3BP1Q13283 466 aaKnown RBP eCLIP19.44■□□□□ 0.7
SF3B3-203ENST00000562874 CRHR2Q13324 411 aa19.44■□□□□ 0.7
SF3B3-203ENST00000562874 ZGPATQ8N5A5 531 aaKnown RBP19.44■□□□□ 0.7
SF3B3-203ENST00000562874 USP40Q9NVE5 1235 aa19.44■□□□□ 0.7
SF3B3-203ENST00000562874 FAM198AQ9UFP1 575 aa19.44■□□□□ 0.7
SF3B3-203ENST00000562874 GAKO14976 1311 aa19.44■□□□□ 0.7
SF3B3-203ENST00000562874 CCL15-CCL14A0A0B4J2E2 113 aa19.43■□□□□ 0.7
SF3B3-203ENST00000562874 INPP5BP32019 993 aa19.43■□□□□ 0.7
SF3B3-203ENST00000562874 INHBEP58166 350 aa19.43■□□□□ 0.7
SF3B3-203ENST00000562874 CCL15Q16663 113 aa19.43■□□□□ 0.7
SF3B3-203ENST00000562874 GORABQ5T7V8 394 aa19.43■□□□□ 0.7
SF3B3-203ENST00000562874 ZFPM1Q8IX07 1006 aa19.43■□□□□ 0.7
SF3B3-203ENST00000562874 FAM151AQ8WW52 585 aa19.43■□□□□ 0.7
SF3B3-203ENST00000562874 BRI3BPQ8WY22 251 aa19.43■□□□□ 0.7
SF3B3-203ENST00000562874 MS4A4AQ96JQ5 239 aa19.43■□□□□ 0.7
SF3B3-203ENST00000562874 HMG20BQ9P0W2 317 aa19.43■□□□□ 0.7
SF3B3-203ENST00000562874 HPS5Q9UPZ3 1129 aa19.43■□□□□ 0.7
SF3B3-203ENST00000562874 PDS5AQ29RF7 1337 aaKnown RBP19.43■□□□□ 0.7
SF3B3-203ENST00000562874 SPDYE5A6NIY4 337 aa19.42■□□□□ 0.7
SF3B3-203ENST00000562874 OS9Q13438 667 aaPredicted RBP19.42■□□□□ 0.7
SF3B3-203ENST00000562874 POLA2Q14181 598 aa19.42■□□□□ 0.7
SF3B3-203ENST00000562874 NOM1Q5C9Z4 860 aaKnown RBP19.42■□□□□ 0.7
SF3B3-203ENST00000562874 DCAF15Q66K64 600 aa19.42■□□□□ 0.7
SF3B3-203ENST00000562874 ZNF341Q9BYN7 854 aa19.42■□□□□ 0.7
SF3B3-203ENST00000562874 MYH7P12883 1935 aa19.42■□□□□ 0.7
SF3B3-203ENST00000562874 MROH7-TTC4A0A0A0MT08 1334 aa19.42■□□□□ 0.7
SF3B3-203ENST00000562874 TESPA1A2RU30 521 aaPredicted RBP19.41■□□□□ 0.7
SF3B3-203ENST00000562874 BTDP43251 543 aa19.41■□□□□ 0.7
SF3B3-203ENST00000562874 RGS3P49796 1198 aa19.41■□□□□ 0.7
SF3B3-203ENST00000562874 TBC1D9Q6ZT07 1266 aa19.41■□□□□ 0.7
SF3B3-203ENST00000562874 PANK1Q8TE04 598 aa19.41■□□□□ 0.7
SF3B3-203ENST00000562874 ZNF384Q8TF68 577 aa19.41■□□□□ 0.7
SF3B3-203ENST00000562874 NAV1Q8NEY1 1877 aa19.41■□□□□ 0.7
SF3B3-203ENST00000562874 SLURP2P0DP57 97 aa19.4■□□□□ 0.7
SF3B3-203ENST00000562874 ARID4AP29374 1257 aaPredicted RBP19.4■□□□□ 0.7
SF3B3-203ENST00000562874 MCAMP43121 646 aa19.4■□□□□ 0.7
SF3B3-203ENST00000562874 MECOMQ03112 1051 aa19.4■□□□□ 0.7
SF3B3-203ENST00000562874 PICALMQ13492 652 aa19.4■□□□□ 0.7
SF3B3-203ENST00000562874 OTUD7BQ6GQQ9 843 aa19.4■□□□□ 0.7
SF3B3-203ENST00000562874 ERICH6Q7L0X2 663 aa19.4■□□□□ 0.7
SF3B3-203ENST00000562874 FAM43AQ8N2R8 423 aa19.4■□□□□ 0.7
SF3B3-203ENST00000562874 SPATA5Q8NB90 893 aa19.4■□□□□ 0.7
SF3B3-203ENST00000562874 CD99L2Q8TCZ2 262 aa19.4■□□□□ 0.7
SF3B3-203ENST00000562874 SSH3Q8TE77 659 aa19.4■□□□□ 0.7
SF3B3-203ENST00000562874 HOOK2Q96ED9 719 aa19.4■□□□□ 0.7
SF3B3-203ENST00000562874 ATRNL1Q5VV63 1379 aa19.4■□□□□ 0.7
SF3B3-203ENST00000562874 LOC285556D6RIA3 1793 aa19.39■□□□□ 0.7
SF3B3-203ENST00000562874 MYH8P13535 1937 aa19.39■□□□□ 0.7
SF3B3-203ENST00000562874 ZBTB22O15209 634 aa19.39■□□□□ 0.69
SF3B3-203ENST00000562874 SURF6O75683 361 aaKnown RBP19.39■□□□□ 0.69
SF3B3-203ENST00000562874 GTF2A2P52657 109 aa19.39■□□□□ 0.69
SF3B3-203ENST00000562874 ATP8B2P98198 1209 aa19.39■□□□□ 0.69
SF3B3-203ENST00000562874 MLLT1Q03111 559 aaPredicted RBP19.39■□□□□ 0.69
SF3B3-203ENST00000562874 TAF1CQ15572 869 aaPredicted RBP19.39■□□□□ 0.69
SF3B3-203ENST00000562874 TNNI3KQ59H18 835 aa19.39■□□□□ 0.69
SF3B3-203ENST00000562874 ERO1BQ86YB8 467 aa19.39■□□□□ 0.69
SF3B3-203ENST00000562874 DBNDD2Q9BQY9 259 aa19.39■□□□□ 0.69
SF3B3-203ENST00000562874 DDX4Q9NQI0 724 aaKnown RBP19.39■□□□□ 0.69
SF3B3-203ENST00000562874 TRIM17Q9Y577 477 aa19.39■□□□□ 0.69
SF3B3-203ENST00000562874 FPGT-TNNI3KV9GXZ4 949 aa19.39■□□□□ 0.69
SF3B3-203ENST00000562874 IRF6O14896 467 aa19.38■□□□□ 0.69
SF3B3-203ENST00000562874 ZBTB7BO15156 539 aaPredicted RBP19.38■□□□□ 0.69
SF3B3-203ENST00000562874 CAP1Q01518 475 aa19.38■□□□□ 0.69
SF3B3-203ENST00000562874 SPTY2D1Q68D10 685 aaPredicted RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms